Perca fluviatilis (European perch): 120575573
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Entry
120575573 CDS
T11622
Symbol
smg8
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
pflt Perca fluviatilis (European perch)
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflt03019
]
120575573 (smg8)
Messenger RNA biogenesis [BR:
pflt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
120575573 (smg8)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
DUF2794
Motif
Other DBs
NCBI-GeneID:
120575573
NCBI-ProteinID:
XP_039682287
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All DBs
Position
16:complement(8451577..8465799)
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AA seq
923 aa
AA seq
DB search
MKEVNMSFPVSMGALLKADLQEDAASRDEGLCVVGIFGKSNMQPGPPKESIINNLADKHI
FSLFGGPEDGGTADSHIQAFYSQESRVLYLLLSSVCDSRQLLRACESLSAATGHSDAHDF
WKGLDRQHCLHLLYMFSVCHVLLLVHPNQTFDVTYDRLFRALDALRQKVLPLIRAAIKDC
PVSKEWKVNCRPCPPRLLFVFQMNGSLKVSANGSESGGNPDKPKKHSPRRRLQHALEDQI
YRIFRKSRVLTNQSSNCLFTVPANQAFVYVIPAVDEDPVGALLGQLRSNCILCEQDTVTV
VSGPRRYQQMRRSVRQSSFGGDPGSMSMGGQLVDCSLKEFLWQHVELVLTKKGFDDSVGR
NPQPSHFELPTYSKWVQVASRLHQVLISNTEEELAELATKVQAQLKVLEAFLDADTKFSE
NRCQKALPLAHSAYQSNLPHNYTTTVHKNQLAQALRVYSQHARGVAFQRYALQLHEDCYK
FWSNGHQLCEERSLTDQHCVHKFHLLPQPGEKPDLDRNPPIMNHNSRGRSTSSCNCGRKQ
APREDPFDIQAANYDFYQILEEKCCGKLERIEFPVFQPSTPDPAPACNQAQRLPSEASGS
GEAERLKEPSTAQSHTPGDPSLSLALSLGQSTDSLGPYADGDGTETQVQQKRPSLVDRQP
STVEYLPGMMHSGCPKGLLPKFSSWSLVKLGPAKSYNCHTGLEQPGFLPGSSFLLPWDLV
IRSRSEEDTGLTEPLDGGTSSWPAPNKTLVGKRGSTGGLGRSRRRDDMARIFVGFEYEDS
RGRRFISCGPDKIVKVLGPGGAKEPATRVLNTDMPLNIQSPSQGRGLKPHFAQLARLFIV
VPDAPLEVTLNPQVLPSPPPCPVFHPEKTDIVLPPDGLWVLRFPYSYATDRGPCYPPKEN
QPLNNYKVLRGILKATTANPPPQ
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagtaaacatgtctttccctgtgagtatgggggctctgcttaaggcagacctc
caggaggacgctgctagccgggacgagggcttgtgtgttgtcggtattttcggtaaaagc
aacatgcagcccggaccgccgaaggagtctattatcaacaatttggcggacaaacacatc
ttctcgctgttcggcggaccggaggacggcggcaccgcggacagccacatccaggctttc
tacagccaggagagccgggtgctgtacctgctgctctcctccgtctgcgacagccggcag
ctgctgcgggcctgcgagtctctgagcgccgccaccggccactccgacgcccacgacttc
tggaaaggcctggaccgacagcactgcctccatctgctctacatgttctccgtgtgccac
gtcctcctgctcgtccaccccaaccagaccttcgatgtgacctacgaccggctcttcaga
gccctggacgccctgcgacagaaggtgctgcctctgatccgagctgccatcaaagactgt
ccggtgtccaaagagtggaaggtgaactgtcggccctgccctccacgcctgctcttcgtc
ttccagatgaacggctctctgaaggtctctgcaaacggttcagagtctgggggaaaccca
gacaagcccaaaaagcactctcccaggaggaggttgcagcatgccctggaggaccaaatt
tatcggatcttccgtaaaagcagagtcctgaccaaccagagcagcaactgcttgtttact
gtgcccgccaaccaagcgtttgtgtacgtgataccggcagtagatgaggacccagtgggt
gccctgcttggtcagctgcggtccaactgcatcttgtgtgaacaagacaccgtcacggtg
gtgtcagggccgaggcgctatcagcagatgcgacgttcagttcggcagtccagcttcggc
ggagatccaggcagcatgtcgatgggcggtcagctggtggactgcagcctgaaggaattc
ctctggcagcacgtggagctggtgctcaccaagaaaggctttgacgacagcgtcggccgc
aacccacaaccttcccactttgagctgccgacctactccaaatgggtccaggtcgcctcc
aggctccaccaagtcctgattagcaacacggaagaagaattagccgagctagccacgaaa
gtgcaagcccagctgaaggttttggaggcttttctcgatgctgacacaaagttctctgag
aacaggtgccagaaagctctgccactggctcacagcgcttaccagtccaatcttccccat
aactacaccactacggtgcacaaaaaccagctggcgcaggctctgcgagtgtacagccag
catgcccgaggagtcgctttccagcgctatgcactgcagcttcatgaggactgctacaag
ttctggagcaacggccaccagctgtgtgaggagcgaagcctgactgaccaacactgtgtt
cacaagttccaccttcttcctcagccaggagagaagccagacctggatcgcaatccacca
atcatgaaccacaacagcagggggcgctccaccagctcctgtaactgcggcaggaaacag
gctcctcgtgaggatccgtttgacatccaggctgccaattatgacttctaccagatactg
gaggagaaatgctgcgggaagctggagaggattgagtttccggtgttccagcccagcact
cctgacccagctccggcctgcaaccaagctcagcgactcccgagtgaggcctcagggtct
ggtgaggcggagaggctgaaggagccaagcactgctcagagccacacacctggagacccc
agcctcagcctggctctcagtctaggccagtccacggacagcctcgggccctacgcggac
ggagatggcaccgaaacccaagtccagcaaaagaggccaagccttgttgaccgccagccc
tccactgtggagtatctcccgggtatgatgcactctgggtgccccaagggcctgctaccc
aagttctccagctggtcgctagtcaaactgggcccagccaagtcatacaactgccacacc
ggtctggaacagccgggcttcctacccggctcctccttcctcttgccgtgggacttggtg
atccgctctcggtcggaggaggacaccggactgacggagcctttggatggaggcacctcc
tcgtggccagccccaaacaagaccctggtgggaaagcgagggagcaccggagggctcggt
aggagtcgcaggagggatgacatggctcggatcttcgtggggtttgagtatgaagacagc
cgaggaagacgcttcatcagctgcgggccggataagatagtgaaggtgctggggccaggg
ggcgccaaagaaccggccaccagggtgctaaacaccgacatgccgctgaacatccagtcc
ccttcacagggccgcggcctgaagcctcacttcgcccagctggctcgcctttttattgtg
gtgccggacgccccactggaggttaccctcaacccacaggtactgcccagtcctcctccc
tgcccagttttccacccagagaagacagatatagtgttgccacctgatggtctttgggtt
ctgcggttcccttattcctacgcaacagatcgtggcccctgttacccccccaaagagaac
caaccactcaacaactacaaggtgctgcgaggcatcctgaaggccacgactgctaaccct
ccaccacagtaa
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