Plantibacter flavus: BWO91_05260
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Entry
BWO91_05260 CDS
T10223
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pflu Plantibacter flavus
Pathway
pflu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pflu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BWO91_05260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflu03021
]
BWO91_05260
03400 DNA repair and recombination proteins [BR:
pflu03400
]
BWO91_05260
Enzymes [BR:
pflu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BWO91_05260
Transcription machinery [BR:
pflu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BWO91_05260
DNA repair and recombination proteins [BR:
pflu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BWO91_05260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF1690
Motif
Other DBs
NCBI-ProteinID:
AQX79461
LinkDB
All DBs
Position
1116046..1119927
Genome browser
AA seq
1293 aa
AA seq
DB search
MLDVTTFDELRIGLATADDIRAWSHGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVIDVDEDARHQDMPGLENELRLEIKTLGDQRDSRIADRLKKLEDD
LVALEEEGAKSEQKRRTKDAAEKEMSQTRKSYDEQIAHLERVWEDFRNLKVGDLKPEDSV
FHELQDRFGLYFEAYMGAEAVKKRLLSFDLAAESELLHHQIAEGKGQKKIRAIKRLRVVN
SFLITGNSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLSHAQNIKAAKRMVERSR
PEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPTQDMIIGLHHLTTLKEGVEGEGR
AFSSVAEAILAKDQGSLDLNAKVRIRLTDVTFAEGTGPEGYEGSGVALVETTLGRALFNE
ALPADYPYVEDVADKGKLSSIVNDLAERYPKTVVAATLDNIKDAGFHWATRSGVTVALSD
VLTPPNKREIVQGYEKQAAKVQSQFDKGLTTDAERRQELIKIWTEATEKVAEAMRANFPA
DNTINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTTKGLELAIANVDSSGELVRDPN
VENSVFARSLAAAAVNPKGEVVAEAGEDVGDVLIDKLVSAGVENIKVRSVLTCESTVGVC
AACYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQE
LFEARTPKGATPIAEAAGRITIDENDKARKVILTPDNGDEPVVYPVLKRAVLLVEDGQHV
ELGQKIHVGAVDPKEVLRVQGVREVQKHLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKV
TVVDHGDTDLLPGELVDRLRYAELNRSAVSEGRRTASARQEVMGITKASLATESWLSAAS
FQETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLARYRNVTVEATEEAKAERYPN
RIFGEDGAFNESDLSFVDFDSFSSDDFTPGNYN
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcacaacttttgacgagcttcgcattggtctggccaccgcagacgacatc
cgtgcctggtcgcacggagaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggtctgttcggtgagcagatcttcggtccttcccgcgactgggagtgc
gcctgcggcaagtacaagcgggtccgcttcaagggcatcgtgtgcgagcgctgcggtgtc
gaggtcacgaagtcgtcggtgcgccgtgagcgcatgggccacatcgaactcgccgccccg
gtcacgcacatctggtacttcaagggtgtcccctcgcgcctcggctacctgctggacatg
gcgcccaaggacctcgagaaggtcatctacttcgcggcctacatggtcatcgatgtggac
gaggacgcacgtcaccaggacatgcccggccttgagaacgagctccgtctcgagatcaag
acgctcggcgaccagcgcgactcgcgcatcgcagaccgcctgaagaagctcgaggacgac
ctcgtcgccctcgaggaggaaggcgccaagagcgagcagaagcgtcgcaccaaggacgcc
gccgagaaggagatgagccagacccgtaagtcctacgacgagcagatcgctcacctcgag
cgcgtctgggaggacttccgcaacctcaaggtcggcgacctcaagcccgaggactccgtg
ttccacgagctgcaggaccgcttcggcctgtacttcgaggcctacatgggtgccgaggcg
gtcaagaagcgcctgctgtccttcgacctcgcggccgagtccgagctgctccaccaccag
atcgcggagggcaagggtcagaagaagatccgcgccatcaagcgtctgcgcgtggtcaac
tcgttcctcatcaccggtaactcgccggcggcgatggtcctcgacgtggtcccggtcatc
ccgccggagctccgcccgatggtgcagctcgacggtggccgcttcgcgacctccgacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtctgcgtcgtctgctcgacctc
ggggctcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtggacgca
ctgttcgacaacggtcgtcgtggtcgccccgtcaccggtaccggcaaccgtgccctgaag
tccctcagcgacatgctgaaggggaagcagggtcgattccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcatcgtcggcccgcagctgaagctgcaccag
tgtggtctgcccaagcagatggcgctggagctcttcaagccgttcgtcatcaagcgcctg
atcgacctgagccacgctcagaacatcaaggccgcgaagcgcatggtcgagcgcagccgc
cccgaggtctgggacgtgctggaggagatcatccgcgagcgtcccgtgctgctgaaccgt
gcgccaacgctgcaccgtctcggcatccaggcgttcgagcctcagctcgtcgagggcaag
gccatccagctgcacccgctcgtctgcgccgcgttcaacgcggacttcgacggcgaccag
atggctgtccacctcccgctctccgtcgaggcccaggccgaggcgcgcatcctgatgctc
gcgtcgaacaacatcctgaagccgtccgacggccgtccggtcaccctgcccacgcaggac
atgatcatcggtctccaccacctgaccaccctcaaggagggtgtcgagggtgagggccgt
gcattctcgtccgtcgccgaggccatcctcgcgaaggaccagggctcgctcgacctcaac
gccaaggtgcgcatccgtctgaccgacgtgacgttcgccgagggcacgggccctgagggc
tacgagggctcgggtgtcgcactcgtcgagacgaccctcggtcgcgcactcttcaacgag
gcgctgccggcggactacccctacgtggaagacgtggcggacaagggcaagctgtcctcg
atcgtcaacgacctcgcggagcggtacccgaagacggtcgtcgcggccacgctcgacaac
atcaaggacgccggtttccactgggcgacgcgttccggtgtgaccgttgcgctcagcgac
gtcctgaccccgccgaacaagcgcgagatcgtgcagggctacgagaagcaggccgccaag
gtccagagccagttcgacaagggtctgaccacggatgccgagcgtcgtcaggagctcatc
aagatctggacggaggccaccgagaaggtcgccgaggccatgcgcgcgaacttcccggcg
gacaacaccatcaaccgcatggtgtcgtcgggtgctcgtggtaactggctgcagatccgc
aacatcgcgggtatgcgaggcctggtgaacaacccgaagggtgagatcatccctcgcccg
atcatctcctcctaccgtgagggcctgtcggtcgcggagtacttcatcgcgacccacggt
gctcgtaagggtctggccgacacggcgctccgtaccgccgactcgggatacctcacgcgt
cgtctcgtcgacgtctcgcaggatgtcatcatccgcgaagacgactgcggcacgaccaag
ggtctcgagctcgcgatcgcgaacgtcgacagctccggtgagctcgtgcgcgacccgaac
gtggagaactccgtgttcgcccgttcgctggccgctgctgcggtcaatccgaagggtgag
gtcgtcgccgaggccggcgaggacgtcggtgacgtgctcatcgacaagctcgtctccgcg
ggtgtcgagaacatcaaggtgcgctcggtcctgacctgcgagtcgaccgtcggtgtgtgt
gcagcctgctacggccgctcgctcgccacgggcaagctcgtcgacatcggcgaggccgtc
ggcatcatcgcggcccagtcgatcggtgagcccggtacccagctgacgatgcgtaccttc
cacacgggtggttcggcatcggcggacgacatcacgcagggtctgcctcgcgtgcaggag
ctgttcgaggctcgtacccccaagggtgcgaccccgatcgccgaggccgccggtcgcatc
acgatcgacgagaacgacaaggctcgtaaggtcatcctgacgcccgacaacggcgacgag
ccggtcgtctacccggtgctgaagcgcgcggtcctcctcgtcgaggacggacagcacgtc
gagctcggtcagaagatccacgtcggtgcggtcgaccccaaggaggttctgcgcgtgcag
ggcgtccgcgaggtccagaagcacctcgtcggtggcgtccagggcgtgtaccgctcgcag
ggtgtcccgatccacgacaagcacatcgaggtcatcgtgcgccagatgctgcggaaggtg
accgtggtcgaccacggcgacaccgacctgctgcccggcgagctcgtcgaccgcctgcgc
tatgccgagctcaaccgctcggccgtgtcggagggtcgtcgcaccgcatcggctcgccag
gaggtcatgggtatcaccaaggcgtccctcgcgaccgagtcgtggctgtcggccgcttcc
ttccaggagaccacgcgtgtcctcacgcaggccgcgatggaaggcaagagcgacccgctg
gtcggcctcaaggagaacgtcatcatcggtaagctcatcccggccggtaccggcctggcg
cgctaccgcaacgtgacggtcgaggccaccgaggaggcgaaggcggagcgttacccgaac
cgcatcttcggtgaggacggcgcgttcaacgagtccgacctgagcttcgtcgacttcgac
agcttcagctccgacgacttcaccccgggtaactacaactag
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integrated database retrieval system
