Perca flavescens (yellow perch): 114545514
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Entry
114545514 CDS
T07494
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04517
IgSF CAM signaling
pflv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
114545514 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114545514 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pflv04812
]
114545514 (sptbn1)
Cytoskeleton proteins [BR:
pflv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
114545514 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
114545514 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PMC2NT
PH_11
CAMSAP_CH
DUF7854
Motif
Other DBs
NCBI-GeneID:
114545514
NCBI-ProteinID:
XP_028419640
LinkDB
All DBs
Position
2:complement(956459..1019058)
Genome browser
AA seq
2350 aa
AA seq
DB search
MMTTVAADLEHLELQQQYSSNDTVNNRWDEDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWINSHLSRVSCRISDLYLDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNTEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAL
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLLGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVSVARELEAEHYHDIKRVTARKDNVIRLWEYLLELLKARRLRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVSTNATKYSVNS
DGYKPCDPQVIQDRVSHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSFEHGKDLTGAMRLLSQQRALEDEMSGRAGHLKHTIAEGQAMVQAGHFAATKIQER
IADLQAQWAALEQLAAARKRRLEEALALHQFQADADDVDAWTLDALRIVSTGETGHDEFS
TLALVRKHKDAAAEVASYRPVIDALHEQAAALPEEEARSEEVRGRLAGIEERYREVSELT
KLRKQALQDALALYKMFSEANACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKDIKTQQDKLNNRWSQFRDLVDQKKESLNSALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AQRLAEEHPDQAHAITGRLAEITAVWEEMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTPAEAEKLVAQHHGIRNEIQNYEEDYQRMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLTQSTAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
PTLEGAEAAIKKQEDFMTTMDANEDKINSVVEVGRRLASDGNINAERIQERVASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGTLLVSEKPETEAVVKEKLSALHAMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQMLEKQVEVRQREVVE
LQSQVKALGQEVKDTDEVDGRRQLVETKFQQLLEPLRRRKDFLVESREVHQFNRDVEDEI
LWVQERMAVATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDILERSQSLVKDESPN
GDGIRRRLADLRALWGQLMEEAERRHGRLQEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDELSAVTMQKKHQIVEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSQVDKL
YAGLKDLSEERQGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDSVNRLADELINSGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILGRIVDKQKKLPEEVGRDQNTVETLQRMHNTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRECDVLEAWRSLLEACDGRRVRLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHYASQEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPSPEPVILQHKESQQQSGVIIQNGLPSDQDFPRDGVDGGDLVNGVGDRSSKEPSPGASP
TSGRKSKTSLSSTLPSKNQDSSPSQLEGLLHRKHEWEGHNKKASNRSWHNVYCVINNQEM
GFYKDGKAAAAGVPYHGEVPIGLKDATCDVASEYKKKKHVFKLRVSDGNEYLFQAKDEDE
MSTWIQAILNASADGCDAPPGSIPGTPASGRAQTLPAAVTLTTESSPGKREKDKEKDKEK
RFSLFSKKKQ
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggccgccgacctggagcacctggagctgcagcagcagtacagcagc
aacgacacggtcaacaaccgctgggacgaggactgggacaacgagaacagctcggcgcgc
ctcttcgaacgctcccgcatcaaggcgctcgcagatgagcgggaggcggtccagaagaag
accttcactaagtggatcaactcccacctgtcccgggtgtcgtgcaggatctcagacctg
tacctggacctgagggatggacgcatgctcatcaagctgctggaggtcctctctggggag
agactgccaaagccaaccaaaggccggatgcggatccactgcctggagaacgtggacaag
gctctgcagttcctgaaggagcagcgggtccacctggagaacatggggtcacatgacatc
gtggacgggaaccaccgcctgacgctgggcctcatctggaccatcatcctccgcttccag
atccaggatatcagtgtggaaactgaagacaacacagagaaacgctcggctaaagatgct
ctgttgctctggtgtcagatgaagacggccgggtatcccaacgtgaacatccacaacttc
agcaccagctggagagacggcatggccttcaacgctctcatccacaaacacaggccagat
ctgatcgactttgacaaactgaagaagtccaacgctcatcacaacctgcagaacgccttc
aacctggcagagcagcacctgggcctcaccaagctgctggaccccgaggacatcagtgtg
gaccatcctgatgagaagtcggtcatcacctacgtggtgacgtactaccactacttctcc
aagatgaaggctctgaaggtggaggggaaacgcatcggaaaggtgctggacaacgccctg
gagacggagaagatgatcgagaagtacgagtctctggcctcggacctgctggagtggatc
gagcagaccatcatcatcctcaacaacaggaagttcgccaactcgctgctcggagtccag
cagcagctgcaggccttcaacacctaccggaccgtggagaaaccgccaaagttcacggag
aagggaaacctggaggtccttctgttcaccatccagagtaagatgagagccaacaaccag
aaggtctacatgccccgagaggggaaactcatctccgatatcaacaaggcctgggagcga
ctggagaaagcagagcatgagagggagctggctctgaggacggagctgattcgtcaggag
aaactggaacaactcgccagacgcttcgaccgcaaggcggccatgagagagacctggctc
agcgaaaaccagagactagtgtcacaggacaactttgggttcgaccttcaggccgtggag
gcggccaccaagaagcacgaggcgattgagacggacatcgcggcgtacgaggagcgcgtg
caggcggtggtttccgtggcgagggagctggaggcggagcactaccacgacatcaaacgc
gtcacggccaggaaggacaacgtgatccggctgtgggagtacctgctggagctgctgaag
gcgcggcggctgcggctggagatgaacctgggcctgcagagagtcttccaggagatgctc
tacatcatggactggatggacgagatgaagatgttgctgctgtctcaggattacgggaag
catctgttgggcgtggaggacctgctgcagaaacacgctctggtggaggccgacatcgcc
atccaggccgaccgggtgaaggccgtcagcaccaacgccaccaagtactccgtcaacagc
gatggctacaagccctgcgaccctcaggtgatccaggaccgcgtgtcccacctggagttc
tgctaccaggagctgacccagctggccgccgagcgccgcgcccgcctggaggagtcccgg
cgcctctggaagttcttctgggagatggcggaggaggagggctggatccgtgagaaggag
cagatcctgtcttccttcgagcacggcaaggacctgacgggggccatgcgcctgctcagc
cagcagcgcgccctggaggacgagatgagcggccgcgccggacatctcaagcacaccatc
gcagagggccaggccatggtgcaggccggacacttcgccgccaccaagatccaggagcgg
atcgctgacctgcaggctcagtgggcggccctggagcagctggcggcggcgaggaagcgg
cgtctggaggaggcgttggcgctgcaccagttccaggcggacgccgacgacgtggacgcc
tggacgctggacgccctgcgcatcgtctccaccggagagacgggccacgacgagttctcc
acgctggcgctggtccggaagcacaaggacgcggccgccgaggtggccagctaccggccg
gtcatcgacgcgctccacgagcaggcggccgcgctgcctgaagaggaggcgcggtcggag
gaggtgcgcgggcggctggccggcatcgaggagcgctaccgcgaggtgtcggagctgacc
aagctgaggaagcaggcgctgcaggacgcgctggcgctctacaagatgttcagcgaggcc
aacgcctgcgaggtctggatcgacgagaaggagcagtggctcaacagcatggagatcccc
gaaaaactggaggacctggaggtcatccagcaccggtttgagagtctggagccggagatg
aacaaccaggcgtctcgtgttgccgtggtgaaccagatcgccaggcagctgatgcacaac
ggtcacccgagcgaaaaggacatcaagacccagcaggacaaactcaacaaccggtggagt
cagttccgtgacctggtggaccagaagaaggagtccctgaactcggctctcggcgtgcag
aactaccacctggactgcaacgagaccaagtcgtggatccgagagaagaccaaagtcatt
gagtccacgcaggagctgggcaacgacctgaccggcgtcatggcgctgcagaggaagctg
acgggcatggagcgcgacctggccgccatcgaggacaagctgggcgacctgcgcggcgag
gcccagcgcctggcggaggagcaccccgaccaggcccacgccatcacaggccgcctggcg
gagatcacggccgtctgggaggagatgaagaacactctgaagacccgcgaggagtctctg
ggcgaggcccggaagctgcagcagttcctgcgcgagctggacgacttccagtcgtggctg
tcgcgcacgcagacggccatcgcctcggaggacatgcccaacacgccggccgaggccgag
aagctggtggcccagcaccacggcatccggaacgagatccagaactacgaggaggactac
cagaggatgcgggacatgggcgagatggtgacgcagggccagacggacgcccagtacatg
ttcctgcgccagaggctgcaggcgctcgacaccggctggaacgagctgcacaagatgtgg
gagaaccggcagaacctgctgacccagtccaccgcataccagctgttcctaagggacact
aagcaggccgaggccttcctcaacaaccaggagtacgtgctggcccacacggagatgccc
cccaccctggagggggccgaggccgccatcaagaagcaggaggacttcatgaccacgatg
gacgccaacgaggacaagatcaacagcgtggtggaggtgggccgccggctggccagcgac
ggcaacatcaacgccgagagaatacaggagagggtcgcctccatcgatgacagacataag
aagaacagggaggctgccgtggagctgctgatgagactcaaggacaacagagacctgcag
aagttcctgcaggactgccaggagctgtctctgtggatcaacgagaagatgctcacggct
caggacatgacgtacgatgaggccaggaacctgcacagcaagtggctgaagcaccaggcc
ttcatggccgagctgcagtccaacaaagagtggctggacaagatccagaaggacggcacg
ctgctggtgtcggagaagccggagacggaggcggtggtgaaggagaagctgtcggcgctc
cacgccatgtgggaggagctggagtccaccacgcagaccaaagctcagtgtctgttcgat
gccaacaaggccgagctgttcacccaaagctgcgcagacctggacaagtggctgggaggc
ctcgagggtcagatccagtccgacgactacgggaaagacctgacctccgtcaacatcctg
ctcaaaaaacaacagatgctggagaagcaggtggaggtgcgtcagcgtgaggtggtggag
ctgcagagccaggtgaaggctctgggtcaggaggtcaaagacacggacgaggtggacggg
cggaggcagctggtggagacaaagttccagcagctcctggagccgctgcggcgccgcaag
gacttcctggtggagtcgagagaggtccaccagttcaaccgagacgtggaggacgagatc
ctgtgggtccaggagaggatggctgtggccacgtccaccgaccacggacacaacctgcag
accgtccagctgctcatcaagaagaaccagactctgcagaaagagatccagggtcatcag
cctcgcatcgacgatatcctggagcgcagtcaaagcctcgtgaaggacgagtcgcccaac
ggggacgggatccggcggcgcctggccgacctgcgagcgctgtgggggcagctgatggag
gaggccgagcgccgccacggccgcctgcaggaggcccacaaagcgcagcagtactacttt
gatgccgccgaggccgaggcctggatgagcgagcaggaactgtacatgatgtcagaggag
aaggccaaggacgagctgagcgccgtgaccatgcagaagaagcatcagatcgtggagcag
gcggtggaggactacgccgagacggtccaccagctgtccaagaccagcagaggactggtg
gctgacggacacccagagagtgagcgaatcagcatgcggcagtctcaggtggataagctg
tacgccggcctgaaggacctatcagaggagaggcagggcaaactggatgagaggctccgc
ctcttccagttgaaccgggaggtggacgacctcgagcagtggatcgctgagcgggaggtc
gtggctgggtcgcacgagctggggcaggactacgaacacgtaactatgttgcaggagcgt
ttccgtgagttcgcccgggacaccgggaacatcggtcaggagcgcgtggacagcgtcaac
cgtctggcggatgaactgatcaactcgggtcacggcgacgcagcaacggtggctgaatgg
aaggatggtctgaacgaagcctgggctgacctgctggaactgatcgacacccggacgcag
attctcgctgcctccttcgagctccacaagttctaccacgatgccaaggagatcctggga
cgcatcgtggacaaacaaaagaaactgccggaggaagtgggccgcgaccagaacacggtg
gagactctgcagaggatgcacaacacctttgaacacgacatccaggccctgggaacacag
gtgaggcagctgcaggaggacgctgtgcgcctgcagtcggcgtatgccggagataaagcg
gacgacatccagcggagggagtgtgatgtgctggaggcctggaggagtctgctggaggcg
tgtgacggacgcagggtccgcctcctcgacaccggagacaagttcaggttcttcagcatg
gtccgagacctgatgctgtggatggaagatgtgatccggcttatcgaggcccaggagaat
cccagagacgtgtcgtcagtggagctgctgatgaacaaccaccaaggcatcaaggccgag
atcgatgcccgaaacgacagcttcaccgcctgcatcgagctgggcaaagcactgctggcc
cggaaacactacgcttcacaggagattaaagagaagctgctgcagctgacggacaagagg
aaagagatgatcgacaagtgggaggaccggtgggagtggctgcgactcatcctggaggtg
caccagttctcccgggacgccggcgtggccgaggcctggctgctgggtcaggagccctac
ctgtccagccgggagatgggccagagcgtggacgaggtggagaaactcatcaaacgccac
gaggcctttgagaagtccgctgccacctgggaggagcgcttctccgctctggagaggctg
accacgctggagctgctggaggtgagaaggcagcaggaggaagaggagaggatgaggaag
cctccatctccagagccggttattcttcagcacaaagagtctcaacagcagagcggagtc
atcattcagaacggactcccgtcagaccaggactttcctcgggatggcgtggacggagga
gatctggtgaacggtgtcggcgatcggagctccaaggagccgagccccggtgcgtccccg
acctccggcaggaagagtaagaccagcctgtcatccacgttgccttccaagaaccaggac
agctcgccgtcgcagctggagggactcctgcaccgcaaacacgagtgggagggacacaac
aagaaggcgtccaacaggtcgtggcacaacgtgtactgcgtcatcaacaaccaggagatg
ggtttctataaagacggcaaggcggctgcggcgggcgtgccgtaccacggcgaggttccc
atcggcctgaaggacgccacgtgtgacgtggcctcagagtacaagaagaagaaacacgtc
ttcaagctccgagtctctgatggaaacgagtatctgttccaagccaaagatgaagacgag
atgagcacctggatccaggccatcctgaacgccagcgccgacggctgcgacgcgccgcca
ggcagcatccccggcacgccggcatctgggcgcgctcagacgctgccggccgccgtcacg
ctcactacggagtcgagtcccggcaagagagagaaggacaaagagaaggacaaggagaaa
cgcttcagtctgttcagcaagaagaaacagtag
DBGET
integrated database retrieval system
