Perca flavescens (yellow perch): 114545771
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Entry
114545771 CDS
T07494
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114545771
Transcription factors [BR:
pflv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114545771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
114545771
NCBI-ProteinID:
XP_028420084
LinkDB
All DBs
Position
19:28330982..28336195
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AA seq
306 aa
AA seq
DB search
MYSMMEHELKPSGQPPSHQTSQGMSPITGNMTGGMGGNGNSHPGSKTACAPGVDPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHM
KEYPDYKYKPRRKTKPLLKKDTQMGKYPLSAGNLLAAAQGQGGSPRMDSYGWGPAGGYAG
MQGEALGYTQQLHRYDLSALQYPPSMTAAQTYMNGGNSYSPMSYSSSPQQHSPVTMSMVK
AEPVSHSPPTGTPSHHRGPLQGDLRDMISMYIPGPGGDAGDPTAAQRGYTSVQQHYLTGT
VPLTHI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgagctgaagccgagcggccagccgccttctcaccagacc
tcccagggaatgtcgcccatcaccggcaacatgaccgggggcatgggcggcaatggcaac
tctcacccgggctccaaaacggcatgcgcacccggagtcgaccccatggataaagtcaag
cggcccatgaacgcctttatggtctggtccaggggacagaggcgcaagatggcccaagaa
aaccccaaaatgcacaactccgagatcagcaagcggctgggagcggagtggaaactcctg
accgacgctgagaagcggcctttcatcgacgaggccaagcggctccgggcggtccacatg
aaggagtaccccgactacaagtacaagccccgccgcaagaccaagcccctgctgaaaaag
gacactcagatgggcaagtacccgctgtcagcgggcaacttgctggcggcggcgcagggc
caaggtggtagtccgaggatggacagctacggctggggccccgccggggggtacgccggc
atgcagggcgaggcgctcggctacacacagcagctccaccggtatgacctgtcagcgctc
cagtacccaccttcaatgacggcagcacagacgtacatgaacggaggcaactcgtacagc
cccatgtcctacagcagcagtccccagcagcacagccctgtcaccatgtccatggtgaaa
gcggagccggtgtcccactcgcccccgacggggacgcccagccaccaccggggccctctg
cagggcgacctcagggacatgatcagcatgtacatccccggccccgggggggacgccggg
gaccccacggcagcacagaggggctacaccagtgtccagcagcactacctcaccgggacc
gtcccactcacacacatctag
DBGET
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