Perca flavescens (yellow perch): 114546160
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Entry
114546160 CDS
T07494
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv02010
ABC transporters
pflv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114546160
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114546160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pflv02000
]
114546160
Transporters [BR:
pflv02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
114546160
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
114546160
NCBI-ProteinID:
XP_028420639
LinkDB
All DBs
Position
19:complement(20456507..20663142)
Genome browser
AA seq
2241 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVEVIWPLFLFLILVWVRSTTQPLYVGECHYPNKA
MPSAGVLPWLQGMICNVNNPCLNYSTPGETPGQVNNFNNSIIAGMLIELQTLLVNRSILS
KAQLLADDLEQWDSVLSQSNLGNAQPVILRSILRDNETFSTYLKGNLLVPPSVVQSLMNA
GIKLNPMMGISSPDNLKSILCEGTNLDEYIQFNSRAEKVAFQNVSCSRTPRQLINAQQVL
LQNLDESKVLSKVPSALNLNAADAVTLMGKTTQDALPVIEEMARLQNSMILKAASSLDFQ
KNMIGSINMLLCEKQPNINLSLQQQMGNNSSVFISGNSSDGFCQTLVDTLEGTPGLSLIW
STFKPLLQGKVLYTPDTPAVRLMVKEANSTFNALAMLKELADSWNKLGPRVWNFLQNSRQ
VNLLRALLANPVFAALLNQRLNGTQWTANLLANFLYNGPPEDRPPGMPPYDWRGVYNSTT
GILKLLSNFLGCLDLNKFEAAPTENHLVDRALELLNNGTYWAGVVFLNLQPNSSQPPPYV
KYKIRMDINDVEITNKVKSRLWSPGARDNSFNNLRYIWGGFAYLQDMMDHGIIQAQTSKT
QPLGVFVQQMPYPCYVNDSFLQSLASSLPLFMTLAWIYSVAMIVKGIVAEKEARLKETVR
IMGLRSSIYWLSWAVSSVLPLAISALLLALLLKYGKVLQYSDPSVIFVFLLVFCLATISQ
CFLISVFFSKANLAAACGGLLYFVLYLPYVLCNAWSDVIGFQAKVVVSLLSCVAFGYGCD
NFAKYEQQGIGIQWYNIKKSPVDGERYSFIVSIIIMLFDAAFYWVLTWYIENVFPGQYGI
PKPWYFPFTASYWCGTASVTGVDHNLLKDSPVHNEYLEKPPPGIKAGVSIRNLVKIYKTG
KKLAVDGLSMDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIHTDMDSI
RKYLGMCPQHNVLFNELTVEEHIYFYARLKGCSHDEVKHEMDQMIEDVGLPHKRKDLAKN
LSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHMD
EADILGDRIAIISHGKMRCCGSSLFLKKYFGSGYYLTLVRDEAEKMTVQRNGIKHNQNKE
DKECPSRDSSPDDGIGSQSWGNSDLSELTAVGQIVRRHVPEAVFLESIGQEITYILPYGG
ARDGTFALLFQELDLAMADLGLTSYGISDTTLEEIFLKVAEDTGVDAEMPTTKEVLVRDC
KRGSRTSKRNSIASVHLKTEHGSGMRELKEKFKSKVEDSKMIASVSGKGSMVITGWELIR
RQFLALFIKRFHHARRSRKGLIAQVVLPAAFVCLSLIFSLIVPPFTEYPSLELQPWMYGL
PQTTFYSKDVPDNVEVSNVVETLVNNPGFGTRCMNGNPIPMLPCSASGSEWFTPSVDQSV
TDIFLNGNWNMSNPSPSCQCSTPKRTSMLPDCPPGAGGLPPPQRIQNTTDTLLDLTGRNM
TDFLIKTFGSSGKTRYGGISVGAVNSQVLLTEAAIKASFMDLRNLFSSFQDNLTDQIFQN
AETLLKKLGTRDNVKVWFYNQAWHGMVSFLSVANNAILRGNLLAGQDPRRYGISVSNHPL
NLTKEQLTSIAMATTSTDLVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNPA
VYWLANFAWDMCNYIIPCLIVIVIFLCFQQKAYVSPPNLPALILLLILYGWSITPMMYPA
SFIFSVPSTAYVVLTCINLFIGINGSIATFVMELINDDNITRINNIVKQVLLIFPHFCLG
RGLIDMAKNQATATLYSSFGQDRFIDPLSWDMVGKNLCAMSIQGAVMFAITILIQYKFFC
KPRLISGKPLSAEEEDVDVARERERIYEGKAQNDLLRIYDLTKVYSRKSTPAVDRLCVGV
PAAECFGLLGINGAGKTTTFKMLTGDIPVSGGEAFLNGYSIRTEMRDVHQNLGYCPQFDA
INELLTGREHLEFYARLRGVPEKEITMVAEWGIQKLGLVKYSNKSAGTYSGGNKRKLSTA
MALIGCPPVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAI
MVNGRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVKQSFPGSILKEKHHNTL
QYQLPYIQGALANIFSQFTSHQQRLGVEDYAVSQTTLDQVFVNFARHQHGEEDSKAYDNA
VDTSDELPLQSVKTSQEAEKV
NT seq
6726 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacacagttcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggtcgttgaagtgatatggcctctgtttctcttcctcatactggtg
tgggtgcggtccaccactcagccactttatgtaggagaatgccactacccaaacaaagcc
atgccatcggctggcgtgctgccctggcttcaaggtatgatctgtaacgtcaacaatccc
tgtttaaactattcaacaccgggggagacaccaggccaagtcaacaacttcaacaactcc
ataattgctgggatgttgatagagctgcaaaccctcctggttaacagatctattctcagc
aaggcacagttgctggcagatgacctcgaacagtgggattcagtcctctcacagtctaac
cttggtaatgctcaaccagtgatcctaaggagtattctcagagacaatgaaactttctcc
acttacctgaaagggaatttgttggttccaccatcggtggtccaaagtctcatgaatgct
gggattaaactcaatccaatgatgggcatctcgagtccggacaacctgaagagcatcctg
tgtgaggggacaaatctggatgaatatatccaatttaacagcagagctgaaaaggtggct
tttcaaaatgtcagctgctcccgcactccacggcagctgattaacgcccaacaagtactt
ctgcaaaacctggatgagagtaaagtgctttctaaggtaccttcagctttgaatctgaat
gcagcagacgcagtgacactgatggggaaaaccactcaagatgcgttaccagtgattgag
gagatggccaggttgcagaactccatgatccttaaagctgctagttcattggatttccaa
aagaacatgattggcagtatcaatatgctactgtgtgaaaagcagcccaacatcaattta
agcttacaacaacagatgggtaacaactcgtcagtcttcatttcgggcaacagttctgat
ggtttttgtcagactcttgtcgacaccctggagggcacacctggtctgagccttatttgg
agcaccttcaagccgttattgcaaggcaaagtcctctacacacctgatacacccgctgtt
cgcctcatggtgaaagaggcaaatagcacattcaatgccttggctatgcttaaagagctc
gctgattcatggaataaactcggaccacgtgtctggaatttccttcaaaatagtcgtcaa
gtcaatttattacgggctttgctggcgaatccagtgtttgctgctctcctcaaccagcgt
ctcaacggcacacaatggacagccaacctgctggccaacttcctgtacaacgggcctcca
gaggatcgtccaccaggcatgccaccctatgactggcgaggtgtttacaactccactaca
gggatcctgaagcttctctccaactttctcggctgtttagatctgaataagtttgaggca
gcccccactgaaaaccatctggtggacagagcactggagcttctgaacaatggtacatac
tgggctggtgttgtctttctaaacctccagccaaactccagccaaccccctccttatgtc
aaatacaaaatacgcatggacattaatgatgttgagattaccaacaaagtgaaaagcagg
ttatggtctcctggagctcgagacaactcctttaacaacctgcgctatatatggggaggc
ttcgcctacctgcaggatatgatggaccatggcattatacaagcgcaaacgtcaaagaca
caacccctgggtgtttttgtccagcaaatgccatacccttgctacgtgaatgactcgttc
ctccagtctctggccagctccctccccttattcatgactttagcctggatctactcagtg
gccatgatcgttaagggcatcgtcgcagagaaagaggcgaggcttaaggagacagtgagg
attatgggcctgagaagttccatctattggctgagctgggcagtatcaagtgtgctgccg
ttggccatcagcgccctcctccttgcccttttactgaagtatggcaaggtgctacaatac
agcgacccatccgtaatctttgtcttcctgctggtgttctgcctggccaccatcagccag
tgcttcctcattagcgtcttcttctctaaggccaatttagcagcggcgtgcggcggactc
ctctactttgtcctctacctgccgtacgtcctctgcaacgcctggagcgacgtcataggt
tttcaggccaaggttgtcgtgagtttgttgtcatgtgtggcctttggctatggctgtgac
aactttgccaagtatgagcagcaaggcattggtattcagtggtacaacatcaaaaagagt
ccagtggatggagaacgctacagcttcattgtgtccatcatcatcatgctctttgatgct
gctttttactgggtgctcacctggtacatcgaaaatgtctttccaggacaatatggaatc
cccaagccatggtacttcccttttactgcatcttactggtgtgggacagcctctgtgact
ggcgttgaccacaacttgctgaaggactcccctgtacataacgagtatctggagaaacca
ccacctggtataaaagcaggggtctcaatccgcaatcttgttaaaatctacaagactgga
aagaagctcgctgtggatggactgagtatggacttctacgagaatcagatcacatctttt
cttggccacaatggagccggaaaaacaaccacaatgtcaattctgacaggactgttccca
cctacatcaggaacagcgctcatcaacggatatgacatccacacggacatggacagcatc
cgaaagtacttgggaatgtgcccacagcacaatgtcttattcaatgagttgacagtggag
gagcatatctacttctacgccaggctgaaaggatgcagccacgatgaggtgaaacatgag
atggaccagatgatcgaggacgtcggtttaccacataagcggaaggatcttgctaagaac
ttgtcaggtgggatgcagagaaagctatcggtggctatagcattcgtcggcggctcaaaa
atcgtcatcttagatgaacctacagcgggagtggacccctatgcacgcaggggtatctgg
gaactgctgttaaaatacaaacaaggtcgtaccatcattttgtctacacaccacatggat
gaggcggacatcttaggtgatcgcattgctatcatctcccacggcaagatgcgttgctgt
ggctcctcactctttctaaagaaatattttggcagcggctactatctcactctggtccga
gacgaggctgaaaagatgactgttcagcgtaatggtatcaaacacaatcagaacaaagag
gacaaagagtgtccttccagggacagcagcccagatgatggcatcggcagccaaagctgg
ggcaactctgatctttcagaattgacagctgtgggtcaaattgtgcggcgccacgtccct
gaggcagtcttcttggagagcattggtcaggagatcacttacatactgccttatggtgga
gccagagatgggacctttgcactgctgttccaagagcttgacctagccatggctgacctt
ggtctgactagctacggtatctctgacaccacgctggaggagatatttcttaaagtggca
gaagataccggagtggatgcagaaatgccaacaacaaaggaggtgttggtgagagactgc
aaaagaggctcccgcacatccaagcggaacagcattgccagcgtccacttgaaaacagag
cacggctctggaatgagagaattgaaggaaaagttcaaaagtaaagtggaagactcaaag
atgattgctagtgtcagtgggaagggatccatggtcatcactggatgggagctgatcagg
aggcagttccttgcacttttcatcaagcgcttccaccacgcccgaaggagccgcaaggga
ctcattgcccaggtggtcttgcctgctgcgtttgtgtgcctgtctctgatcttctccctc
atcgtgccaccattcactgaatatccgagtctggagctgcaaccctggatgtatggtctg
cctcaaaccaccttttacagcaaagatgtgcctgacaatgtggaggtgtctaacgtggtg
gaaaccttggtaaacaatcctggctttggaactcgctgcatgaatggaaacccaataccg
atgttaccatgttcagctagtggctctgaatggttcactccatctgttgatcagtccgtc
actgacatcttcctcaacggtaactggaacatgtccaacccttccccctcctgtcagtgc
agcacgcctaaacggacgtccatgttacctgactgtccacctggtgcaggagggctccct
ccacctcagaggatccagaacacaacagacacattgttggatttaactggacgtaacatg
acggacttcttgatcaagacttttggaagctcgggtaaaacaaggtacgggggcatctct
gtcggagcggtcaactctcaagtccttctgaccgaggcagcaatcaaagcttcattcatg
gatctaagaaacctattcagttcatttcaggataatttgactgatcagatcttccagaac
gctgaaacgctactaaagaagctgggaaccagggacaacgtaaaggtgtggttctacaac
caggcatggcacggcatggtgtccttccttagtgtggccaacaacgccatcctgagggga
aatctgctggcaggacaggatccccggcggtatggcatctccgtgtccaatcaccccctc
aacctcacaaaggagcagctcacctctatagccatggccacaacctccaccgacttggtg
gtgtccatctgcgttatctttgccatgtccttcatccctgccagctttgtcctcttcctc
atccaagagagggtaaacaaagccaagcatctacaatttgtcagtggagttaacccagcg
gtctactggttggccaattttgcctgggacatgtgtaactacatcatcccatgcttgatt
gtgattgtgatcttcctctgcttccaacaaaaagcctatgtttcacctcctaacctgcct
gctttgattctgctgcttattttgtatgggtggtccatcacccccatgatgtaccccgcc
tcctttatcttcagcgtgcccagcacagcctacgtggtgctgacctgcatcaacctcttc
attggtattaacggcagcatagccacctttgttatggagctcattaatgatgataatatc
acccgcatcaacaacatagtgaagcaggtgctgctgatattcccacatttctgtctcggc
agagggctaattgacatggccaagaaccaggcaacagccaccctgtacagcagttttggg
caagaccgtttcatagacccactcagctgggacatggtgggaaagaacctctgtgccatg
tccattcagggagctgtcatgtttgccatcacaatcctcatccagtataaatttttctgc
aagccaaggcttatttcagggaagccattatctgcagaggaagaggatgtcgatgttgct
cgggaacgcgaacggatttatgaaggcaaggcccagaacgaccttctgaggatctatgat
ctcactaaggtctactctcggaagagcacccctgccgtggacagactatgtgtgggagta
cctgctgcagagtgtttcggcttgcttggaatcaacggggctgggaaaaccaccacgttc
aagatgctgacaggagacatcccagtctccggtggagaggccttcctaaatggatacagc
ataagaacagaaatgagggacgtgcaccagaacctgggctattgtccccagtttgatgct
attaatgagctgctgactggtcgagagcatctggagttttacgccaggttacgaggggta
ccagaaaaagagatcaccatggtggccgagtgggggatccaaaaattgggcctggtcaaa
tattccaacaagtcagcaggaacctacagcggtgggaacaaacgcaaactttctacagcg
atggccctgatcggttgtcctccagtgattttcctggatgagccaaccactgggatggac
cccaaagcccggcgcttcctgtgggactgcatcctgagtgtcatcaaagagggacgctca
gtcatcctcacatcacacagtatggaggagtgtgaagcactgtgcacgcgcatggccatc
atggtcaacggtcgcttcaagtgcctcgggagcattcagcatctgaagagccgatttgga
gatggctacacagtaattgtgagggttggtggctctcctcctgcattgaagccagttgag
gacttcgtcaagcagtcctttccgggcagtatcctgaaggagaagcatcacaacacactg
cagtatcagctcccgtacatacagggagctttggccaacatattcagccagttcaccagc
catcagcagagactgggtgtggaagactatgctgtgtcccagaccaccctggatcaggtc
tttgtgaactttgcgagacaccagcatggagaggaggactctaaggcctatgacaacgca
gtggacacttcagatgagctgccattgcagtctgtgaagacctcccaagaagcagagaag
gtgtaa
DBGET
integrated database retrieval system
