Perca flavescens (yellow perch): 114546535
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Entry
114546535 CDS
T07494
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114546535 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114546535 (mlh3)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
114546535 (mlh3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
114546535
NCBI-ProteinID:
XP_028421164
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Position
20:complement(14676293..14687324)
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AA seq
1204 aa
AA seq
DB search
MIKCLTKEVQGKLRSGVAIPSLQQCLEELILNSIDAEATCVGVRMDMEAFKVQVIDNGAG
INAEDMECVGNRYHTSKCRSVEDLDNLRWYGFRGEALASLVSLATLVEISSRTRSSVKTH
VKIFKDGKGMDVFEADNARPSAGTTVVICNFLHNMPVRRKRMDAVLEGERIRHRVEAISL
MHPSVSFTLKNDCTGAMMVQLPKARNTYHRFIQIHSLGRAQKLGEISYTHGQFEVIGYIG
KEGHYNNSLQFLYVNDRLLLKTRIHKLLNFLLRRLSSSNQKNGSPDGQSAIRSPKHKRSQ
ELHGVYIINIKCSYSDYDICLEPAKTLIEFKDWDRILLCIEEAVKAFLSRENLVAELSQE
DLDYLPPELFSAHNTDSGNGGQATSSASTLDCSIGMKLASDPVHRKSKDDRLCEDNVSRE
SGQMECKEETEQQGKKKITADEFLKIKSEGSINKEYRYEPQCDLARLEPTSDNHITEEVE
PTFSEAGEGSPILCMSSSVRQLESEKQELSKEKEIQLNNATSTSNMTSLDSITQHIQPDL
NRIEQQLPDCQSAGGHEHTLVSNRKISLSDPYVHEKLLTQDLSQINKSVFLCKERSLASK
RKISLHAGNDRICQKPCKDFTPIIPPKIPRLATCQKLALYKESGSLEKFRRVYGKSDELK
LPYQETQNNTRLPHTDSFVLNSQNLSVCRKDQQNGGVIETETEETQSILRSPPTLSAFTR
LKPVSGQNRGKTSLAAKLNHLKQHRTDDSKVLTHLSRTALQDNTCHSSNDGSQDSSNNEN
DCGLNPEPVPGCRTDPLLAEKEEATTSGDWLHHYDTSVGKTVYVNKVTGLSRYEDPPTEE
TQVRCTSDVSNMAVIISETGMEHRCYPFQVDLVLPFLPKSRTERVISSGLDDRDANGKSS
NSLTLLYSKWNNPVFVRPPTVGVDISSGQADGLAVKIHNILFPYRFSKAMICSMKVIHQV
DKKFLACLINTREEEPAALNETEGNLLVLVDQHAAHERVRLENLVADSYEDDPDAPGERR
LCSSTILPPLEISVTEEELRLLRSCQAHLRCLGLEVKFSQEADPHVFVRKVPLCFMEKES
NEIRRGRPSVIKPIVEEYLQEQIELLRSTGRVRGTLPLTVLKVLASLACHGAIKFNDSLN
RDECCSLVASLSACQLPFQCAHGRPSIAPLVDTLHLDKDEQEFQKPNLQKLRRMYKAWEL
YGNR
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgtttgactaaagaggttcaggggaaacttcgctccggtgtcgctatcccc
tcgcttcagcagtgtttagaggagcttatcctaaacagcatcgatgcagaggcgacctgt
gtgggagtcaggatggacatggaggcgttcaaagttcaggtaatcgacaacggtgccggg
ataaacgctgaggatatggagtgcgtgggaaaccgataccacacaagcaaatgcagatct
gttgaagacctggacaacctccggtggtatggtttcagaggagaagcactggcaagttta
gtttctctcgccacactagttgaaatctcatcccggaccagatcatcagtgaaaactcac
gttaaaatcttcaaggatggcaagggcatggatgtgtttgaagcagataatgctcgaccc
tccgcggggacaactgttgttatttgtaacttcctccacaacatgccagtccggaggaag
aggatggatgcagtcctggagggtgagaggatcagacacagagtggaggctatttctctg
atgcatccctctgtgtctttcaccctgaagaacgactgcacaggagccatgatggtgcag
cttcctaaagctagaaacacctaccataggtttattcagatacacagtcttggacgagca
cagaaacttggagaaatcagctacacacacggacagtttgaagtgattggttacattggc
aaagaaggccactacaacaacagcttacagttcctgtacgtaaatgacagactgctgctg
aaaacacggatacacaagctcctgaactttctcctacgcagactgagcagttcaaatcag
aaaaatggcagtccagatgggcagtctgctatcaggagtccaaagcacaaacgaagccaa
gaactgcatggagtatacatcatcaatattaaatgttcttactcagattatgacatatgt
cttgagcctgccaaaactctaatagagttcaaagattgggaccgcattttgctctgtatc
gaagaggcagtaaaagcattcctgagcagggagaatttggtggcggagctttctcaagaa
gacttggactacttgcctcccgaactgtttagcgcacacaatacagatagtggcaatggt
ggtcaagcaactagcagtgcttccacactagattgcagtattggaatgaaactggcatct
gatcctgttcatcgaaagagcaaagatgaccgtttatgtgaggacaatgttagccgggag
tctggtcagatggagtgcaaagaagagactgaacaacaggggaagaaaaagataactgca
gatgagtttttaaagataaaaagtgaaggaagcataaacaaagaatatagatatgagcca
cagtgtgatctggctagacttgaacctacatctgataatcacattactgaagaagtggag
ccaacattcagtgaagcaggggaaggctctccaatcttatgtatgtcaagttcagtcaga
caactagaaagtgaaaaacaggaactctcaaaagaaaaagaaatacaattaaataatgct
acctcaaccagcaacatgacttcactagacagcatcactcaacatattcagcctgattta
aacagaattgagcaacagttaccggactgccagagtgcaggaggacatgaacatacttta
gtaagtaaccgaaagatcagtttgtctgatccatacgttcacgaaaagctgctgactcag
gacctgtcccaaatcaacaagtcagtatttctatgtaaagagagatcccttgcatcaaaa
cgcaaaatctcactgcatgcaggcaatgacagaatttgtcagaaaccatgcaaagacttc
actcctatcattcccccaaaaattcccagacttgcaacttgtcaaaaattggccttatac
aaggagtctggatcccttgagaagtttagaagagtatatggaaaatctgatgaactaaaa
ttaccctatcaagaaactcagaataacactagacttcctcatacagacagctttgtcttg
aattcccagaatttgtcggtttgccggaaagatcagcaaaatggtggagttatagaaaca
gaaacagaagagacacagagcatccttcgaagcccaccaaccctctcagcattcaccagg
ttaaaaccagtctcagggcagaatagaggcaaaacctctttggcagctaaactcaaccat
ttgaaacaacacaggacagatgattcaaaagtattaacacacctgtccaggactgctttg
caggacaatacctgtcatagtagtaatgatggtagccaagacagcagtaacaacgagaat
gactgtggtttgaatcctgagccagtcccaggttgcaggacagatcctctgctggctgag
aaggaagaggctacgacatcgggggactggcttcatcactacgatacatctgtgggaaag
acagtttacgtcaacaaagtgactggactcagccgatacgaagacccacctactgaagaa
acacaagtgcgctgtacatctgatgtctccaatatggccgttatcatctctgaaacaggg
atggaacatagatgctacccatttcaggtggatctagtgttgcccttcctaccaaaatcc
aggacagagagagtgattagttcagggcttgatgacagagatgccaatggtaagagctcc
aactcacttacgttgttgtactcaaaatggaataatcccgtatttgttcgacctcctacg
gttggtgtggacatatcaagtgggcaagctgacggactggctgtcaagatccacaacatc
ctgtttccataccgtttttctaaggccatgatttgttcaatgaaggttattcatcaagtg
gataaaaagttccttgcatgtcttatcaatacaagagaggaagagcctgcagcactcaat
gaaactgaaggaaaccttctggtgctggtggatcaacacgctgcacacgagagagttaga
cttgaaaatctagttgcagattcctatgaggatgacccagatgcaccaggggagagacgt
ctgtgttcatcaaccattttgccacctctcgagatcagtgtaacagaagaagagcttagg
ctgcttaggtcttgtcaggcacatttgcgttgtttgggcctggaagtgaagttctcacag
gaagcagatccacacgtttttgtaaggaaggtaccactgtgcttcatggaaaaggagagt
aatgagatcaggcgggggagaccatctgttatcaagcctattgttgaggagtatcttcaa
gagcagattgagttactccgctcaactggtcgagtgagaggaactctgcctctcactgtg
ctgaaggtgctagcctccctagcatgccatggtgccatcaaattcaatgacagcctgaat
agagatgaatgctgcagcttggtggcgtccttgtctgcctgccagctgcccttccagtgt
gcccatggccgtccctccattgctcccttagtagacaccctccatttggacaaagacgag
caggaattccagaaacccaacctccaaaagctaagaagaatgtataaggcgtgggaacta
tatggaaatagataa
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