Perca flavescens (yellow perch): 114546549
Help
Entry
114546549 CDS
T07494
Symbol
atg4d
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04136
Autophagy - other
pflv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114546549 (atg4d)
04136 Autophagy - other
114546549 (atg4d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pflv01002
]
114546549 (atg4d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114546549 (atg4d)
03029 Mitochondrial biogenesis [BR:
pflv03029
]
114546549 (atg4d)
Peptidases and inhibitors [BR:
pflv01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
114546549 (atg4d)
Membrane trafficking [BR:
pflv04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
114546549 (atg4d)
Mitochondrial biogenesis [BR:
pflv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
114546549 (atg4d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
114546549
NCBI-ProteinID:
XP_028421198
LinkDB
All DBs
Position
2:complement(21484582..21495122)
Genome browser
AA seq
498 aa
AA seq
DB search
MNTVSPSAVQYVGGGMQDELVESRRQQPLEQQGSFSLRLPQTPDPSREATGEPDEMDKLK
AKLMSAWNNVKYGWTVKSKTSFNKMSPVTLLGHSYLLNSEDEVERFRLAFVSRIWLTYRR
EFPQLEGSTWTTDCGWGCMLRSGQMLLAQGLLVHLMPRDWAWPDAQQLTDVDFEVFRPRS
PARAGGVPIPSFGSPRGSNTPEKSLSDQAPKCSQKQRPESVRDRQAEPIHHNLVTWFGDQ
PPAPFGLHQLVEIGKGSGKKAGDWYGPSIVAHILRKAVAKTSVLHNLAVYVAQDCTVYKE
DVVHLCDLSLSQTPPDPSSQAWKSVIILVPVRLGGEALNPSYIECVKNILKLDCCIGIIG
GKPKHSLYFIGFQDEQLLYLDPHYSQPVVDFSQVNFSLESFHCSSPKKMPFNRMDPSCTI
GFYAKNKKDFESLCSAVGVALSSTKEKYPIFTFVEGQGQDYGLEGHCSNHSGPAAHILPP
GKLGRSNSRRISDEFVFL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgtttcgcccagcgcagtacagtacgtagggggagggatgcaggatgagctg
gtggagagccggaggcagcagcctctggagcagcagggcagctttagtctcaggctgcca
cagacaccagatcccagcagagaggcaaccggagagcccgacgaaatggacaaactgaaa
gccaaactgatgtccgcgtggaacaatgtcaaatatggttggactgttaagtctaaaacc
tccttcaacaagatgtcaccagtcactctcctgggtcactcctatctgctcaacagtgaa
gacgaggtggagcggtttcgtttggcttttgtgtccaggatttggctgacctacaggagg
gagttccctcagctggagggctccacctggaccaccgactgtggttggggctgtatgctg
cgcagtgggcagatgctgctggcgcaggggctcctagtccatttgatgcccagagattgg
gcttggccagatgctcagcagctaaccgatgtggattttgaggtgttcagaccccgttcc
ccagctcgagctggcggggtacccatcccctcctttggctctccacggggatccaacacc
cctgaaaagtccctgagtgatcaggcacccaaatgtagccagaagcaaagaccggagtct
gtaagggacaggcaggcagagcccatccatcacaatctggtcacctggttcggggatcag
cccccagcaccttttgggcttcaccagctggtggaaatcggcaaaggttcagggaagaag
gctggtgactggtatggcccctctattgtggcacacatactaaggaaagcggtagccaaa
acctctgtgcttcacaacctggctgtatatgtggctcaggattgtacagtgtacaaagaa
gatgttgtgcatctatgtgacctgtcactaagccagactccccctgatccatccagccaa
gcctggaagtctgtcatcatactggtgcctgtacggctaggaggggaggccctcaacccg
tcctacatcgaatgtgtcaagaacatcctaaagttggattgttgtattggaatcatcgga
ggcaaaccgaagcattcactttacttcattggcttccaagacgagcagctgctgtatctg
gaccctcactactcccagcctgtggtggatttctcccaagtcaacttttcactggagtca
ttccactgtagctctcccaagaagatgcccttcaaccgcatggatcccagctgtaccatt
ggcttttatgccaagaacaagaaggactttgagtctctatgttctgctgttggtgtggcc
ctgtcatcaacgaaggagaagtaccccatctttaccttcgtagagggccagggtcaagat
tatggacttgagggtcactgcagcaatcacagtggacctgcagcccacattctgcccccc
ggcaaactggggaggagtaacagcagaagaattagtgatgagtttgtcttcctgtaa
DBGET
integrated database retrieval system
