Perca flavescens (yellow perch): 114546588
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Entry
114546588 CDS
T07494
Symbol
scaf8
Name
(RefSeq) protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114546588 (scaf8)
03041 Spliceosome [BR:
pflv03041
]
114546588 (scaf8)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114546588 (scaf8)
Spliceosome [BR:
pflv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114546588 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
PRP38_assoc
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
114546588
NCBI-ProteinID:
XP_028421265
LinkDB
All DBs
Position
20:11808124..11842459
Genome browser
AA seq
1419 aa
AA seq
DB search
MEAVKHFNNELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFVQKCKPEYKV
PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIIATFQHLYRCPSDDKSKIVRVLNLWQKN
AVFKSDIIQPLLDMAAGIAPPSITPVMPSAAPVNNTTPGTPATPATPANLVQGLPDWASQ
ITNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQLT
AAATANSLNPLEQRVSSFNKKLLGPFDFGNDSERGEESKKDSSSSQLPMVSEPINSSIFH
QLAEQLQQQNLEQFQKQLLEHQQHQQHQQKAMSMEGQDSIFGQENSTAQSSSQPQLSEPD
NKVDDSMDNQQQDMDLDEGLDGMEEEIFEAEEKKNVSTRSRTRSRSRSRSPKRRRSRSRS
GSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRARQKLSTGSFKIG
SKIIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDDFAEGGIIDQETVNDEWE
AAKNAEPAKEVTSQPVSAETTAASNTQTESYNQQVTMMPVQLPVAQAVPNAVGLVPPTFP
VTMGIPPPGYGPPPPFIRAGFNASHPPPGFMQAGQTAAMASAAASLVQSSVVTSQEAVKE
SPFSAMIPPTSTMPGGFMAGVFNPVGIQTHQANDKTSQSAESMDAAAELTLQGMQNAVRS
GMGLLGMHPTASLTHQLHQSGLTGQRMPGLLPLDVRPNLLQPGAAARFPLLMQQGPIQQA
AGLLESSLQAQARARAPFSQLDPFNRAPNLTSENVSNTEDKSPSGADEGKDQDYRFPPME
KQSTGLLRTPPPEHREPLGGGGGAGGGGGGRPPLLQTPGTQPARTSLVGRLQALAGFTPD
SRWNQTRGDFDERDAMRGGLQAPGGPKGFQEERPTPGQNFPNRFESRPGTAAAAAAAAGG
AAAAGVSGNTGAVGGPQAWNRSGGAAAPFDSELHQDLDERRRPWDRQRDRDERDFDFRRE
MNGNRHSRERERERERERDRERGRDRPREHERDRDRDKERDRERERERGSWTPLLPLPTP
LLPTPPLNPNLALNHGKLLAPLKLNPQIHPRFQSPLLPQAQAKPSLLGLNQPLPQVQKSP
PQPHSEAAVPDPQSETPALSETPQAQSPPSAQSPDLSSDNKGQSSLNEALTQAGSSPQPE
TPPQTESPSQSPAQSPSNTTASPDTEAPNQASPLVKALSQDSPVAFTQADSPPEETHSLE
EQESPQKDEEESQESASSPQPQWVNGSGMDNSTVAKSTPEASPELSPEPTEEPSPDSVLP
ESEPEQLASPEDVDNEQSEPMEEAASQPVVDTVTDTEGT
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaacactttaacaatgagctgtactcattgaacgagtacaagccgcca
atctccaaggccaagatgacccagatcaccaagtctggaatcaaagctataaaattctac
aaacatgttgtccagagtgtggaaaagtttgttcaaaagtgcaaacccgaatacaaggtc
cctgggctgtatgtcatcgactcaattgtcagacagtcgcggcaccagtttggtacggag
aaggatgtttttgccccacgcttcagcaagaatatcatcgctacgttccagcacctgtac
cgctgcccttcggatgataagagtaagatagtgcgagtcctgaacctgtggcaaaagaat
gcggtcttcaagagtgacatcatccagcctctgttggacatggcagcagggattgcccct
cccagcatcacacctgtaatgcccagtgctgctccagtcaataacactacacctggcact
ccagctactccggctaccccagctaacctagtccagggtctgcctgattgggcttcccag
attaccaacacagacactgtggctgctgtggcacagatcctacagagtccccagggacaa
cagctgcagcagctggtacagagtctacaaatgcagcagcagaagccccagccgtccctg
ctgcaggccttggatgctggcctggtggtgcagttgcaagctctgacagctcaactcact
gcggccgcgactgccaacagcctcaaccccctggagcagagggtctcctcttttaataag
aagcttctgggtccttttgattttgggaatgattctgaacgtggtgaagaatccaaaaag
gactcctcgtcatctcaactgcccatggtgtcggagccaatcaacagctccatcttccat
cagctggctgagcagctgcaacagcagaacctggaacagtttcagaagcagcttttagag
caccagcagcaccagcagcaccaacagaaggcaatgagcatggaagggcaggactcaatc
tttggtcaagagaactcaactgctcagagcagcagccagccacagctttctgagccagat
aacaaggtggatgactccatggacaaccaacagcaggacatggatctagatgagggcctg
gacggtatggaggaggagatctttgaggcagaggagaagaagaatgtaagcacacgctcc
agaacacgctcaaggtcgcgctctaggtctcccaagaggagaaggtccaggtcccgctct
gggtcacggaaacggaaacaccgtaagcgatcacgctcacgctccagagaccgcaaaagg
aagtcatcacgatcttactcaagtgaaagacgcgcccgagagcgagagaaggagcggcag
aagaaaggactgcctcccatacgatccaagactctaagtgtgtgcagcacaactctgtgg
gtgggccaggtggacaaaaaggccactcagcaagacctcaccaacttatttgaagagttt
ggtcagattgagtctatcaatatgatccctcccagaggctgtgcatacatctgtatggtc
cacagacaggatgcataccgtgctcgccagaagctcagcactggctcctttaagattggc
tccaaaatcatcaagattgcatgggctcttaacaagggggtaaagcaggagtacaagcag
ttttgggatgtggacctgggcgtcacctacataccttgggagaaggtgaagctggatgac
ctggatgactttgctgagggaggaatcattgaccaggagactgttaatgatgagtgggaa
gcagccaagaatgctgagccagccaaggaagttacaagtcagccggtaagcgctgagact
acagcagcatcgaacacccagactgagagctacaaccagcaggtcaccatgatgcctgta
cagctcccagttgcccaggctgttcccaatgcagtaggtttggtgcctcctaccttccct
gtcaccatgggcatacccccaccaggctatggaccgccaccacccttcataagggctggc
ttcaatgcctcacatcctccgccaggttttatgcaggcaggacagacagcagccatggcc
tcagcagcagcttctctagtgcagtcttcagtggtaaccagccaagaagctgtcaaggaa
tcaccattcagtgctatgattcctccgaccagcactatgcctggcggcttcatggccggt
gtattcaacccagtgggaatccaaactcatcaagccaatgacaaaacatcccagtctgca
gagagtatggatgctgctgcagagcttacactgcaaggcatgcagaatgcagtccgcagt
gggatgggtctccttggtatgcaccccacagcttcgctcacccaccagctgcatcagtct
ggtctgactgggcagagaatgcctggcctgctacctctggatgtgcgacccaacctcctg
caacctggggctgccgcccgcttcccgctcctcatgcagcaggggcccatccagcaggct
gctggcctccttgagagttccctccaggctcaagcccgtgccagggctcctttctctcag
ctggacccctttaacagggcccccaaccttaccagtgaaaatgtatccaatacagaagat
aagtctccttctggagctgacgagggcaaagaccaggactaccgcttccctccaatggaa
aagcagagcacaggcctgctgaggacccctccaccagagcatagggagccccttggaggt
ggtggcggagcaggaggcggtggaggaggcaggcctcccttgctccagaccccagggact
cagccagccagaaccagcctagtgggacgtctgcaggctcttgcgggattcactcctgac
agccgctggaaccagaccagaggggactttgatgaacgagatgccatgcgaggaggccta
caggccccaggcggtccaaaaggcttccaggaggagcggcccacacctgggcagaacttc
cccaaccgctttgagagccgtcctgggacagcagcagcagcagcagcagcagcaggagga
gcagcagcagctggagtttcgggcaacactggagctgttggggggccacaagcctggaac
cgaagtggtggtgccgcagccccctttgacagcgaactacatcaagacctagatgagcga
aggcgcccatgggacaggcaaagagacagagatgaaagagattttgacttcaggagggag
atgaatggcaaccgccacagccgagagagagagcgggaacgcgagagggagagagacagg
gagcgaggcagagaccgccccagagagcatgaacgcgaccgagaccgcgacaaagagaga
gaccgcgagagggaacgtgaacgtgggagctggacacctcttctccctctgcctacacct
ttgcttccaactccacctcttaatcccaatctggccctgaaccacggcaagctgcttgca
ccactcaaattgaacccccagattcacccacgattccagtccccactcctgcctcaagct
caggccaagccctctctcttgggtctgaatcagccactgcctcaggttcagaagtctcca
cctcaaccacacagcgaggctgctgtgcccgatccccagtcagaaaccccagctctgtct
gagacacctcaggcacagtccccaccctcagcccaatcacctgacctgtcatctgacaac
aaaggtcagagctcgttgaatgaggctctcacccaggccgggtcgtccccacaacctgag
acccctccacaaacagaatcgccatctcagtccccagcccagtccccctccaacaccact
gcttctccggacactgaggccccaaaccaagcctcaccactggttaaggccttatcccag
gactcacctgtggccttcacacaagctgacagcccccctgaagagactcactctctggag
gagcaggaaagcccacagaaggatgaggaagagtcacaagagagcgcctcctcaccccaa
ccccagtgggtcaatggatctgggatggacaatagcactgtggccaaatctacacccgag
gcctctcctgagctctctcctgagcccactgaagagccctctcccgattctgtgctccct
gaaagtgaaccggagcagcttgcttctcctgaggacgtagacaatgaacagagtgagccc
atggaggaagctgcgagtcagccagtggtagacactgtcacagacactgaggggacataa
DBGET
integrated database retrieval system
