Perca flavescens (yellow perch): 114546650
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Entry
114546650 CDS
T07494
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114546650
Membrane trafficking [BR:
pflv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114546650
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
114546650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40
Beta-prop_HPS5
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Lgl_C
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
EIF3I
Synaptobrevin
Beta-prop_VPS8
RAB3GAP2_N
Beta-prop_Vps41
WD40_like
Motif
Other DBs
NCBI-GeneID:
114546650
NCBI-ProteinID:
XP_028421396
LinkDB
All DBs
Position
20:23971139..24008225
Genome browser
AA seq
1145 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSSAPAQPGTPRENDVIQETLQSEHFQLCKTVRHGFPYQPSS
MAFDPVQKILAVGTQSGALRLFGRAGVECYCQHESGAAVIQLQFLINEGALVSALADDSI
HLWNLRQKIPAILHSLKFNRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVIM
WNKAIELSTKTHPGPVVHISDNPMDEGKLLIGFECGVVVLWDLKCKKADYRYNYDEAIHS
VAWHHEGKQFVCSHSDGTLTTWNIRAQAKSAQIITPHGKQPKDGKKPEPCKPILKVEYKT
TRAGDPFMILSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEP
YAVVVLLEKDLVVIDLGQIGYPIFENPYPLTIHESPVTCCEYFADCPAELIPALYSVGSR
QKRQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGSIKFWDASALMLQVLYKLKTAKVF
ERARSKEEKANTDIVEEDPFAIQTLSWCPESRMLCVAGVSAHVIVYRFSKQEITTEVVQL
LEVRMQCEFSDGHSPDPGGDQTPTLPTPGASSSPQESEPPTQPSTGSNSSEGPRDNKPCL
QVRSSPLKQSPGYQVELVIQLVWVSGEPPQPITSLAINSSYGLVVFGNSNGLAVVDYLQK
TLLLNMGTSELYSPSDPYQRQPRSPRKTRQPSGATCDSNDGSNTSEDRCKSPTSGSTSPC
NSDDERKQKFIEKVKCKSRRFSKTVANDFAKMSRKISSSSEQKPDLDAKDNAFTRSRSSS
VTSIDRESREAISSFHFCESFPRKTDSVVSPCLLVGTTQGTVMMVALSLPPPGDHRLQQP
VGISSCGTMVTLKGGILTMALLDNTGTLLPPSYEPWYDPNASDEEKEKSRRRRPASPPPA
QEGQDSQFAVLCSEKQAKVVAMPSQTRIYKHSITESSFVLRADVVQMAGAYCIACFCANG
HIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFSNLGQALYLTSPTEIQRITYSQETCDNR
QEMLSELFTPVETPEAPNKGFFKGLFGGGAQSLDREDLFGETGAGKASRSLAQHIPGSGG
MEGMKGAASGVVGDLARARIALDERGQKLGELEDRTAAMMASADSFSKHAHDMMLKYKDK
KWYQL
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacattagaaaggtgctagacggcttgacggcggcttcttcttcctcc
tccgcgcctgcccagccgggtactcccagggaaaacgatgttatccaggagactctccag
tcggagcatttccagctttgcaagactgtgcgccatggcttcccatatcaaccatcctca
atggcttttgaccccgtccagaaaatcttggccgtcgggactcagagtggagctttgagg
ctctttggccgtgcgggtgtggagtgctactgtcagcatgagagcggtgcggcagtcatc
cagctccagttcctgatcaacgagggggcgctagtgagtgccttagctgatgacagcatc
cacctgtggaacctgaggcaaaaaatccctgcgatcctacattctctcaagttcaacagg
gagagaatcacatactgccacctgcccttccagagcaagtggctttacatcggcacagaa
agaggaaacatccacattgtcaacgtggagtccttcactctctcaggctacgtcatcatg
tggaacaaagccatcgaactatccaccaaaacacacccaggtcctgttgtgcacatcagt
gataaccccatggatgaaggaaagcttctgattggatttgaatgtggggttgtggtgttg
tgggatttgaagtgcaaaaaagctgactaccgctacaattatgatgaggcgatccactca
gtagcctggcaccatgagggtaaacagtttgtttgcagccactctgatggcactctgacc
acatggaatatacgagcccaagccaagtctgcacagatcatcacaccacatggaaagcag
cctaaggatggaaaaaagccagaaccatgcaagcctattctgaaagtggagtataaaaca
acaagggctggggacccattcatgatcctgtctggaggtctgtcttacgatacagtgggg
aggagagcctgtctgactgtgatgcatggaaagagcactgctgtcctagagatggactac
cccatcgtagatttcctaacgctgtgtgaaactccatatccaaatgactttcaggagcct
tatgctgtggtggtcctcctcgagaaggacttagttgtaatagacctcggacagattggg
taccccatatttgagaatccatatcctctgactatccatgagtcaccagtgacctgctgt
gagtactttgctgactgccctgctgaacttattcctgcactttactctgtcggcagccgg
caaaagagacaaggttacagcaagaaggaatggcctattagtggaggaaactggggccaa
ggcactcagagttacccagagatcataatcactggacatgctgatgggtcgatcaaattt
tgggatgcttctgcattaatgcttcaagtgctgtacaagctgaagactgccaaggttttt
gagagggctcgcagtaaggaagagaaggcaaacacagatatagtagaggaggacccgttt
gccatccagaccttgtcctggtgccctgagagcaggatgctctgcgtggccggcgtgtct
gcccacgttatcgtctataggttcagcaaacaagaaatcaccactgaagttgtgcagctt
ttggaggtgcggatgcagtgtgagtttagcgatggtcactcccctgatccaggaggggat
cagacccccaccctgcccaccccgggagcttcctccagccctcaggagagtgagcctccc
actcagccctccacaggcagcaactcctccgaaggaccccgggacaataaaccatgcctg
caggtgcggagctccccgctgaagcagtctccgggctaccaggtggagctggtgatccag
ctggtgtgggtgagtggggagccacctcagcccatcaccagcctggctatcaactcctcc
tacggccttgtggtgtttggaaacagtaatggtctagctgtggtggactacctccagaaa
actctgctcctcaacatgggcacatcggagctgtacagcccatctgacccctaccagagg
cagcctcgctcgccacgcaaaacacggcagccctctggagcaacgtgtgattccaacgat
gggtccaacacctcagaggaccgctgcaaatcacctacttcaggatctacctccccttgc
aattctgatgatgaacggaaacagaagttcatagagaaggtgaagtgcaaaagcagacgc
ttttccaagacggttgccaatgactttgccaagatgtcacggaaaattagctcgtctagc
gagcaaaagccagacctggatgccaaggataacgctttcacccgctcacgtagttcaagt
gtaaccagcatagaccgagagtcccgagaggccatctcctccttccacttctgtgagagt
ttccccaggaagacagacagcgtggtcagcccctgtctgctggtgggaaccacccagggc
actgtgatgatggtggccctcagcctgccgccccctggggaccacaggctgcagcaaccc
gttggcatctcctcctgtggcactatggtcacactcaaaggaggcattttgactatggcc
ctgttggacaacactggaactttgctgcccccttcctacgagccatggtacgacccaaat
gcctcagacgaggagaaggagaaaagccggaggcgcaggccagcctcccctcccccggca
caagagggtcaagattcccagttcgctgtgctgtgttcggagaaacaggccaaggtggtg
gccatgccctcccaaacccgcatctacaaacacagcatcaccgagtcctccttcgtgctg
agggctgatgttgtgcagatggccggagcttactgcatcgcctgtttctgtgctaacggc
catatcatgaccctgagtttacccagtctacggcctctgctggatgtgaactacctgccg
ctgacagacatgcggatagccagaacgttctgcttctccaacctgggtcaggccctgtac
ctcacctcccccacggagatccagaggatcacctatagccaggagacctgcgacaaccgg
caggagatgctcagtgagttgtttacccctgtggagacaccagaggctcctaacaaaggt
ttcttcaaaggcctgtttgggggcggcgctcagtctcttgacagggaggacctctttggt
gaaacaggtgctggtaaggcgtcccgtagcctggcccagcacatccctggctcaggaggc
atggagggcatgaagggtgcagcgtctggggttgtgggagatcttgcccgcgcccggata
gctctggacgagagagggcagaaactgggcgagctggaggacagaacagcagccatgatg
gccagcgcagattccttttccaaacatgctcatgatatgatgctgaagtacaaagataag
aagtggtaccagctctga
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