Perca flavescens (yellow perch): 114546701
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Entry
114546701 CDS
T07494
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03013
Nucleocytoplasmic transport
pflv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114546701 (srrm1)
03015 mRNA surveillance pathway
114546701 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114546701 (srrm1)
03041 Spliceosome [BR:
pflv03041
]
114546701 (srrm1)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114546701 (srrm1)
Spliceosome [BR:
pflv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
114546701 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
114546701
NCBI-ProteinID:
XP_028421488
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All DBs
Position
20:complement(11159091..11172263)
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AA seq
858 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKVDDDKKEKDIRERAQSKSPRRRKTRSPSPRRRSP
VKRERKRSASRSPRRKPSPVESSSPPPPLMQLPTKPLEQLVEPDTLEGVLPEPVIQETPS
ICDTVVEVVKPDSVTEVKESSPEKTNKKEERPRSREREKDSRRERPHHRSRSHSRTRRRR
SRSRSYSPRRRPSPRRRMSPRRRSPPRRGPTSSRQRHRRSPVRRRRSRSASSSGSSSSNS
RSPKKAVKRISNTPPRKPVHHPDNPISPAGKDRRSPSPRARRGRGSASPARSFGLKRKPG
GRGDSPSDNAKPRPSEGSESDEDKNEKEATADSVQQRRQYRRQNRQSSSDTGSSSSEDDG
HKRPTTGPGARNGDVSRRRSRTPSPRRRHRDTSPRKRRSPSPGRRRHTPSPPRRRRSPSP
PRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQKRKISSSPTKRSSPGAKRRPSRSP
KRRSSPPLRRRTPPSSSPPRHRRSPMLPSVRPGRDARSPVAAASRLSPSPANRSRVVRGS
TSPQGRFETSNTSPSNQRRQQSPSHSGKPIRRVSRTPEPRNNQRQSPSPKPMRRASSRSV
SPQPVAQKRPVPASASPSPSRSASGSPPPAKKASSGSGSQSPSKNSDVEGSGKKKKKKKE
KKHKKEKKHKKHKKHKKAKSGGTVTGDGQENQCVEEDGESRKESDSEVEDSLDDLEKHLR
EKALRSMRKAQLSPSQMS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacaagtgcggagcaagacaaccgtttcagcaacaag
cagaagaaactgctgaagcagctgaagtttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctggaagtcatcaaaccttggattactcagcgagtgacagagattctg
gggttcgaggacgatgtcgtcatagagttcatatttaaccagctcgaggagaagcaccca
gatagcaagatgatgcagatcaacctgacgggcttcttgaatgggaagaatgcccgggag
ttcatgagggacttgtggcccctgctgctgagtgcccaggagaacattgctggcatcccg
tctgcttttcttgaacagaagaaagaggaaattaaacagagacagattgaacaggagaag
ctagcttccctgaagaaggttgatgacgataagaaggaaaaggacatccgagagagggct
cagtcaaaaagcccaaggagacggaagacaaggtccccatcaccacggcgaaggtcacca
gtgaagagggaaaggaaacgtagtgcctcgcgctccccaagacgcaaacccagtccagtt
gagagcagttcaccccctccacctctgatgcagctgcccaccaaacctttggagcagctt
gtggagccagatacattggaaggagttctgccagaaccagtcatccaagaaactccatcc
atctgtgacacggttgtggaggtggtgaaaccagattctgtgactgaagtcaaagaatct
tcgccagagaagactaataagaaagaggaaaggcccaggtcccgggagagggagaaggac
agcaggagggaaagacctcaccaccgttctcgttctcattcccgcactcgcaggcgacgc
tcccgttctagatcttactcccctcgtagaagaccgagtcccaggaggaggatgtctcct
cgtagaaggagcccccccagacgtggccctaccagctccagacagagacacagacgctcc
cctgtccgcaggaggcgctctcgctctgcttcatcctctggcagcagctcttccaactct
cgctcacctaaaaaagcagtgaaaagaatatctaacacaccgccccggaaaccggtccat
catcctgacaaccccattagccccgcagggaaggacagacgatcaccatctccacgggcc
agaaggggcagaggctctgcatcgccagccagatcatttggtttgaagcgaaaaccagga
ggaaggggtgattctccatctgataatgccaagcccagaccttctgaagggtctgagtca
gacgaggataaaaatgagaaagaggcaacagcagattcggtgcagcagcgacgtcagtat
cgcaggcagaatcgacagtcgtcctcagatacagggtcttcctcctccgaagacgatggg
cacaagaggccaactacagggccaggtgccagaaatggggacgtcagtaggagacgcagc
cgtacaccctcccctcggaggcgacacagggatacctctccaaggaaaagacgttctcct
tctcctggacgcagacgtcacaccccgtctcccccacggcgtcgcagatctccctctcct
cctcgacgaaggtctccttccccacctccccgtcgtcgttcgccatccccaagacgatat
tcaccccctatccaacgacgctacagcccctcacctttgcctccacagaagaggaagata
tctagctctcccacaaaacgctcttctccaggggccaagcgacggccgtccaggtccccc
aagcgcagaagttctcctcctctaaggagacgcactcctccatcctcatctccacccaga
cacaggaggagccccatgttgccttctgtcaggccaggcagggatgcgcgatcccctgtt
gcagcagccagccgcctctccccgtcccctgcaaaccgcagtcgcgttgtaaggggttcc
accagtcctcagggacgctttgaaacctccaatacatctccatctaaccagaggagacag
cagtccccttcacacagtggcaaacccatccgcagagtgtcccgcaccccggagccacgc
aacaaccagagacaatctccaagtcccaagcctatgaggagagcatcctccagatcggtt
tcccctcaaccagtagctcagaaacgtccagtccctgcatctgcctccccctcgccgtct
cgctcagccagtgggtctccgccaccagcaaaaaaagccagcagtggttctggcagtcaa
tccccaagcaagaattccgatgttgagggcagtgggaagaaaaagaagaagaagaaggaa
aagaaacacaagaaagagaagaaacacaagaagcacaagaaacataagaaggcgaagagt
ggtggcacagtgactggagatggacaagaaaaccaatgtgtggaagaggatggagagtct
agaaaggaatcagacagtgaagtagaggacagcttggatgacctggagaagcacctaaga
gaaaaggccctgcgctccatgaggaaggcccagttgtctccatcacagatgtcctga
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integrated database retrieval system
