Perca flavescens (yellow perch): 114546990
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Entry
114546990 CDS
T07494
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03022
Basal transcription factors
pflv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114546990 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
114546990 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114546990 (mnat1)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114546990 (mnat1)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114546990 (mnat1)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114546990 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
TcdA1_RBD_2
zf-RING_2
zf-P11
TRAF6_Z2
Motif
Other DBs
NCBI-GeneID:
114546990
NCBI-ProteinID:
XP_028422004
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All DBs
Position
20:15912972..15946541
Genome browser
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPTVDKEVEIRKKVLKIYNKRDFDFPSLREYNDYLEQLEDIVYNLTNNIEVENTKL
RMEQYQRENRDLIQRNKVKLTREQEELEELLLLEQQGNEQRRLDLLQEEQRQLQAKRKNK
QALLDELEQSQLPATILLAQHKVRAAKLETQIEQQKQAVKPTSLFSTGIHMRQTVSLQPA
PKIEEVLYHYNPLQVETYGPLVPELEQLGRLGYLNHVRAAMPQDTAGGYTSALACHRALQ
DAFSGLFLLKR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaagggtgtccgagatgcaaaacaaccaaatacagaaatccgtcgctgaag
ttgatggtgaacgtctgcggccacacgctatgtgagaactgtgtggagatgctgtttgtg
cgtggttcgggtaactgtgtgcagtgcgacacgcccctgaggaagagcaacttccgcgtg
cagctcttcgaagacccgaccgttgataaggaggtggagattcgcaagaaggtgctgaag
atatacaacaagagagattttgacttccccagcctgagagaatataacgactaccttgag
caattggaggacatagtgtataacctgacaaacaacattgaggtcgagaacaccaagctg
cggatggagcagtaccagagggagaaccgagatctcatccagaggaataaggttaaactt
acacgagagcaggaggagctggaggagctgttgttgctggagcagcagggcaatgagcag
cggagactggacttgctgcaggaggagcagaggcagctacaggccaagaggaagaacaag
caggctctgctggatgagctggagcagtctcaacttcctgccaccatcttgcttgcccag
cacaaggtccgcgctgccaagctggagactcagatagagcaacagaagcaagcggtcaaa
cctaccagtttattttcaactggaatccatatgcgccagacggtgtctcttcagcctgct
cctaagatagaggaagttctgtaccactacaacccccttcaagttgaaacctatggcccc
ttagtgcctgaactggagcagctgggcagactcgggtatctaaaccacgtgcgggctgcc
atgcctcaggacacagctggaggatacacctcagctttggcatgtcatcgagcgcttcag
gatgctttcagtgggctgttccttctgaaacgctga
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