KEGG   Perca flavescens (yellow perch): 114547302
Entry
114547302         CDS       T07494                                 
Symbol
pnn
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03013  Nucleocytoplasmic transport
pflv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114547302 (pnn)
   03015 mRNA surveillance pathway
    114547302 (pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pflv03019]
    114547302 (pnn)
   03041 Spliceosome [BR:pflv03041]
    114547302 (pnn)
Messenger RNA biogenesis [BR:pflv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     114547302 (pnn)
Spliceosome [BR:pflv03041]
 Complex C
  Other components
   EJC/TREX
    114547302 (pnn)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 114547302
NCBI-ProteinID: XP_028422406
LinkDB
Position
20:complement(9035082..9042539)
AA seq 669 aa
MAVAVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQIRRLGGPMAGPGGGRGRGI
NLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDARHDSDAEDDDDVKKPVLQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVSTEKQKRRTEIEQK
LEVQAEAEKKKAESDKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTK
TKPHIFYVPGKMCSATQKLLDDSTKKLNAVFDERREAFAEHLSKMESRPRRQPNRDQDGN
TAATGMDHSAEGKPAGQVVKVTGNRGDAEMEEEDDEEEEREKEGDRKVIEKVKGEKGEKE
VEEEVEGMELGEECSEEKKGREEGFKDREEKEASPGSEGMEVESGQVDRSKAEEGETDSK
QGPTDLQNEKIQDTRSSEPTITSQEAPDTSHQPQPSHTAVEPAVKSPETQGSSPTPEPQT
APTGPGQDIIVIPSLEVQTSAAENQAVEGKPGDEAPQNLPDSEGAPSITPAPSKEEEDGG
RGRKKAKEPKKGHSHSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSSSSSSRSRSR
ESSKRKRRPSDRARDMKKGEDRSHRKRGGSSGGGRDSKGSKKRNSKEGRSRSSRSDREHK
DRDRKDKRR
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggcggtggcggtgcgtagcttgcaagaccagcttgaaaaagcaaaggaaagcctgaaa
aatgtggacgataatattcgtaaattaacgggacgtgatcctaatgaatcaagaccgggt
cagatccgtcggctcggcggccccatggcaggcccaggtggaggtagaggcagaggaatc
aacctgctcaggcgtagtctctcagacatgggaagcggcggcccccctgccaagcagagg
gacatcgaaggagccctgctgaggcttgcgggggaccagagggccaggagagacgcgcgt
cacgacagcgacgctgaggatgatgacgatgtcaaaaagccggtgttgcagtcgtctgta
gtagctacctccaaggagagaacgcgcagagacctcattcaagatcaaacgatggacgag
aggggcaaacagaggaatcggcgtatgttcggcctgctgatggggaccctgcaaaaattc
aagcaagagtccaacgtctccacagagaagcaaaagcgacgtacagagattgagcagaag
ctggaggttcaggctgaggctgagaaaaagaaggcggagagtgataagagggagctgttt
gaagagagaagagcgaaacagactgagctgagactactggaacaaaaagtggaattagct
cagctgcaagaggagtggaccagccacaataatcgtctggtgaaatacattcgtaccaag
accaagcctcatatcttctacgtgcctggaaaaatgtgctccgccacacagaaactcctc
gacgactccaccaagaaactaaatgctgtgtttgacgagaggcgtgaggcttttgccgaa
cacctcagcaagatggagtcccgcccccggcggcagccaaaccgcgaccaggatggcaac
acggcagcaacagggatggaccactcggcagagggtaagccagcaggtcaggtagtcaag
gtgacaggtaacaggggggatgcagagatggaggaagaggatgatgaggaagaggagagg
gaaaaggagggagatcgaaaggtgatagagaaggtcaagggggagaaaggagagaaggaa
gtggaggaagaggtggaggggatggagttgggtgaagagtgcagtgaggagaaaaaggga
agagaggaggggtttaaagacagagaggagaaggaggcaagtccagggtcagaggggatg
gaggtagaaagcgggcaggtggacaggagtaaggcagaggagggagagacagacagtaaa
caggggcctacagacctccaaaatgaaaagatccaggacactcggtcctctgaaccaacc
ataaccagccaagaagcaccagacaccagtcaccagccccagcccagccacactgcagtg
gagccagcagtaaagtcccctgagacccagggatcctctccaaccccagaaccccaaaca
gcccccacggggcctgggcaggatatcattgtcatccccagcctcgaggtccagacctca
gctgctgagaaccaggccgtggaagggaaaccaggggacgaagcaccccaaaatctgcct
gattccgagggggcccccagcatcacccctgcaccctctaaggaggaagaggatggcggg
agagggagaaagaaggcaaaggagccaaagaaggggcatagtcatagtaacagctcctcc
tcttcctcgtccggctcctcctccagcggaagctcctcctcgtcctccggatccagccgc
tcctcttcgtcatcctcctcctcctcgtcctcatcgtccagcagccgaagtcgcagccga
gaaagcagtaagcgcaagaggaggccgtcagatagggccagggacatgaagaaaggagaa
gatagaagccaccgcaagagaggagggagtagcggaggagggagggactcgaagggatcc
aagaagaggaacagcaaggaagggagaagcaggtcatcccggagcgatagggagcataaa
gatagagacaggaaggacaagagacgctaa

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