Perca flavescens (yellow perch): 114547302
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Entry
114547302 CDS
T07494
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03013
Nucleocytoplasmic transport
pflv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114547302 (pnn)
03015 mRNA surveillance pathway
114547302 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114547302 (pnn)
03041 Spliceosome [BR:
pflv03041
]
114547302 (pnn)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114547302 (pnn)
Spliceosome [BR:
pflv03041
]
Complex C
Other components
EJC/TREX
114547302 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
114547302
NCBI-ProteinID:
XP_028422406
LinkDB
All DBs
Position
20:complement(9035082..9042539)
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AA seq
669 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQIRRLGGPMAGPGGGRGRGI
NLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDARHDSDAEDDDDVKKPVLQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVSTEKQKRRTEIEQK
LEVQAEAEKKKAESDKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTK
TKPHIFYVPGKMCSATQKLLDDSTKKLNAVFDERREAFAEHLSKMESRPRRQPNRDQDGN
TAATGMDHSAEGKPAGQVVKVTGNRGDAEMEEEDDEEEEREKEGDRKVIEKVKGEKGEKE
VEEEVEGMELGEECSEEKKGREEGFKDREEKEASPGSEGMEVESGQVDRSKAEEGETDSK
QGPTDLQNEKIQDTRSSEPTITSQEAPDTSHQPQPSHTAVEPAVKSPETQGSSPTPEPQT
APTGPGQDIIVIPSLEVQTSAAENQAVEGKPGDEAPQNLPDSEGAPSITPAPSKEEEDGG
RGRKKAKEPKKGHSHSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSSSSSSRSRSR
ESSKRKRRPSDRARDMKKGEDRSHRKRGGSSGGGRDSKGSKKRNSKEGRSRSSRSDREHK
DRDRKDKRR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgtagcttgcaagaccagcttgaaaaagcaaaggaaagcctgaaa
aatgtggacgataatattcgtaaattaacgggacgtgatcctaatgaatcaagaccgggt
cagatccgtcggctcggcggccccatggcaggcccaggtggaggtagaggcagaggaatc
aacctgctcaggcgtagtctctcagacatgggaagcggcggcccccctgccaagcagagg
gacatcgaaggagccctgctgaggcttgcgggggaccagagggccaggagagacgcgcgt
cacgacagcgacgctgaggatgatgacgatgtcaaaaagccggtgttgcagtcgtctgta
gtagctacctccaaggagagaacgcgcagagacctcattcaagatcaaacgatggacgag
aggggcaaacagaggaatcggcgtatgttcggcctgctgatggggaccctgcaaaaattc
aagcaagagtccaacgtctccacagagaagcaaaagcgacgtacagagattgagcagaag
ctggaggttcaggctgaggctgagaaaaagaaggcggagagtgataagagggagctgttt
gaagagagaagagcgaaacagactgagctgagactactggaacaaaaagtggaattagct
cagctgcaagaggagtggaccagccacaataatcgtctggtgaaatacattcgtaccaag
accaagcctcatatcttctacgtgcctggaaaaatgtgctccgccacacagaaactcctc
gacgactccaccaagaaactaaatgctgtgtttgacgagaggcgtgaggcttttgccgaa
cacctcagcaagatggagtcccgcccccggcggcagccaaaccgcgaccaggatggcaac
acggcagcaacagggatggaccactcggcagagggtaagccagcaggtcaggtagtcaag
gtgacaggtaacaggggggatgcagagatggaggaagaggatgatgaggaagaggagagg
gaaaaggagggagatcgaaaggtgatagagaaggtcaagggggagaaaggagagaaggaa
gtggaggaagaggtggaggggatggagttgggtgaagagtgcagtgaggagaaaaaggga
agagaggaggggtttaaagacagagaggagaaggaggcaagtccagggtcagaggggatg
gaggtagaaagcgggcaggtggacaggagtaaggcagaggagggagagacagacagtaaa
caggggcctacagacctccaaaatgaaaagatccaggacactcggtcctctgaaccaacc
ataaccagccaagaagcaccagacaccagtcaccagccccagcccagccacactgcagtg
gagccagcagtaaagtcccctgagacccagggatcctctccaaccccagaaccccaaaca
gcccccacggggcctgggcaggatatcattgtcatccccagcctcgaggtccagacctca
gctgctgagaaccaggccgtggaagggaaaccaggggacgaagcaccccaaaatctgcct
gattccgagggggcccccagcatcacccctgcaccctctaaggaggaagaggatggcggg
agagggagaaagaaggcaaaggagccaaagaaggggcatagtcatagtaacagctcctcc
tcttcctcgtccggctcctcctccagcggaagctcctcctcgtcctccggatccagccgc
tcctcttcgtcatcctcctcctcctcgtcctcatcgtccagcagccgaagtcgcagccga
gaaagcagtaagcgcaagaggaggccgtcagatagggccagggacatgaagaaaggagaa
gatagaagccaccgcaagagaggagggagtagcggaggagggagggactcgaagggatcc
aagaagaggaacagcaaggaagggagaagcaggtcatcccggagcgatagggagcataaa
gatagagacaggaaggacaagagacgctaa
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