KEGG   Perca flavescens (yellow perch): 114547355
Entry
114547355         CDS       T07494                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    114547355 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pflv03009]
    114547355 (wdr43)
Ribosome biogenesis [BR:pflv03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    114547355 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Utp12 WD40_CDC20-Fz WD40_Prp19 Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta WDR90_beta-prop_4th Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_HPS5 WD40_MABP1-WDR62_1st Paf1 WD40_2 NBCH_WD40 AHSA1 Beta-prop_IP5PC_F Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Tricorn_2nd SGL PFF1_TM
Other DBs
NCBI-GeneID: 114547355
NCBI-ProteinID: XP_028422488
LinkDB
Position
20:7936614..7953000
AA seq 655 aa
MAADAGSSTLQLPCVFSPKSRQYLALCAQDGRLRIWNTDSKTLQQEYVPSAHLSATCICI
AWGPCRIVKEGPQRKKRKSEAGQVEEKADLLAMGTAAGSVLIYSTAKGALHCTLDGGHSG
GVNCVQWHPEDSLLYSGSDDTNIIEWDLQTGKARSKWKADRAAVTSLCVSPDGKLLLSAG
QIIKMWDLDTKEVYRKFTGHSSAVTTLRFATTRPPDSNGLYFLSGAAHERLLSVWQVRED
GKDKNSVVSFTLTDEPKHIDLVASNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPFSPV
CTVQMSDTKDSPAPIPLLAAALRADARSVLLAYGNHLQPVMEKVEINTAERHVCLTRDVQ
TNLSLSMESTVSKVKTPIVNAKSRVLVPGLPGHQAPVKGTSQGSEKRKKDTDTKEMSIAE
RLGEIDLSTVSTEKGAPKGTASLQTDNFAVLLVQGLESNDANILNKVFQTRKEMVIKKTV
ARLPLPAVLPLVEEITKRLQGHPFTAVLMVRWLKAVLMHHTSYLASLPDLVTQLGVLYHM
IESRVKMFHKLTKLHGKLYLLMTQVATSDSSNTVTDVDHTAKLVYEEESSDEDEASGDEG
LPDDDDDSDNWEEEEVMEDDKEEPADEENDDPDSRTDSKANGEEDMEHGNESEEE
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggcggccgatgctgggagctctacgctgcagctaccctgcgttttttcaccaaaatca
cgacagtacttagcattgtgtgcccaggacggcagacttcgcatttggaacacagatagt
aaaacacttcaacaagaatatgtgccttcagcccatttgagtgccacttgtatctgcata
gcatggggaccatgtcggatagtcaaggaggggcctcagaggaagaagaggaaatcggag
gcagggcaggtggaggagaaggcagacctgttggcgatgggcacagcagcaggcagtgtg
ctcatctacagtacagcaaagggagcactgcactgtaccctggatggaggccatagtgga
ggagtgaattgtgtccagtggcaccctgaagacagtttattatacagcggctcagatgat
acaaacattatagagtgggacctgcagacaggcaaggcacgaagtaagtggaaggcagac
cgtgcagctgtgaccagtttgtgtgtgagccctgatggcaaactgctgctctcagctggt
cagataatcaagatgtgggacttggacaccaaggaagtttacaggaagtttacaggccat
tcctcggctgtgacgaccctgcgctttgccaccactcgacctccggacagcaatggtctt
tatttcctgtctggtgctgctcatgaacgactgctcagcgtttggcaagtacgagaagat
ggaaaggacaagaattcagtggtgtccttcacgctgacggacgagccaaaacacatcgac
cttgtcgcgtccaacagcaaggaagaggcggtgaggctggcagtggtgtgtaaggatgga
cagctgcatctctttgagcactttttaaatgggccctgtaagaagccgttttcaccagtg
tgtacggtgcagatgtcagacacaaaggactccccagcaccgatcccactgctggctgct
gccctcagagctgatgcacggtctgtgctgctggcctacggcaaccacctacagcctgtg
atggagaaagtagagatcaacacagcagagagacatgtctgtttgacccgggatgttcag
accaacttgtccctttccatggagtccaccgtttccaaggtcaaaacccctattgtcaac
gccaagagcagagtcttggtcccaggacttcctggtcaccaagccccagtcaagggaacc
tcacagggatcagagaagaggaaaaaagacacagacaccaaagagatgtcaatagcggag
cgactgggtgaaatcgatctctctacagtctccactgagaagggggctcctaaagggacg
gcctctttacaaacggacaattttgcagttctgctggtgcagggcctggagagtaacgat
gccaacatcctaaataaagtttttcagactcgtaaagagatggtgataaagaaaacagtt
gctcggttacccctccctgctgttttacctttggtggaagagatcacaaaaagactccag
gggcacccttttacggcagttttaatggtacggtggctcaaggctgtgctcatgcaccat
acatcatacctggcatcgctgcccgacctggttacccagctgggagtgctttatcacatg
attgagagcagagtgaagatgttccacaagctaacaaagctgcatggaaaactgtatctc
ctaatgacacaggtggcgacaagtgacagcagcaacacagttacagatgttgaccacaca
gctaagctggtgtatgaagaagaatcatctgatgaagatgaggcctctggtgacgaaggt
cttcctgatgatgatgacgactctgataactgggaagaggaggaggtgatggaagacgac
aaggaggaaccagcagacgaggaaaacgatgatccagacagcaggacagattccaaagca
aacggagaggaggacatggagcacggaaacgagagcgaagaggagtga

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