Perca flavescens (yellow perch): 114547355
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Entry
114547355 CDS
T07494
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114547355 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pflv03009
]
114547355 (wdr43)
Ribosome biogenesis [BR:
pflv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114547355 (wdr43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_ACSF4
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Paf1
WD40_2
NBCH_WD40
AHSA1
Beta-prop_IP5PC_F
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Tricorn_2nd
SGL
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
114547355
NCBI-ProteinID:
XP_028422488
LinkDB
All DBs
Position
20:7936614..7953000
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AA seq
655 aa
AA seq
DB search
MAADAGSSTLQLPCVFSPKSRQYLALCAQDGRLRIWNTDSKTLQQEYVPSAHLSATCICI
AWGPCRIVKEGPQRKKRKSEAGQVEEKADLLAMGTAAGSVLIYSTAKGALHCTLDGGHSG
GVNCVQWHPEDSLLYSGSDDTNIIEWDLQTGKARSKWKADRAAVTSLCVSPDGKLLLSAG
QIIKMWDLDTKEVYRKFTGHSSAVTTLRFATTRPPDSNGLYFLSGAAHERLLSVWQVRED
GKDKNSVVSFTLTDEPKHIDLVASNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPFSPV
CTVQMSDTKDSPAPIPLLAAALRADARSVLLAYGNHLQPVMEKVEINTAERHVCLTRDVQ
TNLSLSMESTVSKVKTPIVNAKSRVLVPGLPGHQAPVKGTSQGSEKRKKDTDTKEMSIAE
RLGEIDLSTVSTEKGAPKGTASLQTDNFAVLLVQGLESNDANILNKVFQTRKEMVIKKTV
ARLPLPAVLPLVEEITKRLQGHPFTAVLMVRWLKAVLMHHTSYLASLPDLVTQLGVLYHM
IESRVKMFHKLTKLHGKLYLLMTQVATSDSSNTVTDVDHTAKLVYEEESSDEDEASGDEG
LPDDDDDSDNWEEEEVMEDDKEEPADEENDDPDSRTDSKANGEEDMEHGNESEEE
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgatgctgggagctctacgctgcagctaccctgcgttttttcaccaaaatca
cgacagtacttagcattgtgtgcccaggacggcagacttcgcatttggaacacagatagt
aaaacacttcaacaagaatatgtgccttcagcccatttgagtgccacttgtatctgcata
gcatggggaccatgtcggatagtcaaggaggggcctcagaggaagaagaggaaatcggag
gcagggcaggtggaggagaaggcagacctgttggcgatgggcacagcagcaggcagtgtg
ctcatctacagtacagcaaagggagcactgcactgtaccctggatggaggccatagtgga
ggagtgaattgtgtccagtggcaccctgaagacagtttattatacagcggctcagatgat
acaaacattatagagtgggacctgcagacaggcaaggcacgaagtaagtggaaggcagac
cgtgcagctgtgaccagtttgtgtgtgagccctgatggcaaactgctgctctcagctggt
cagataatcaagatgtgggacttggacaccaaggaagtttacaggaagtttacaggccat
tcctcggctgtgacgaccctgcgctttgccaccactcgacctccggacagcaatggtctt
tatttcctgtctggtgctgctcatgaacgactgctcagcgtttggcaagtacgagaagat
ggaaaggacaagaattcagtggtgtccttcacgctgacggacgagccaaaacacatcgac
cttgtcgcgtccaacagcaaggaagaggcggtgaggctggcagtggtgtgtaaggatgga
cagctgcatctctttgagcactttttaaatgggccctgtaagaagccgttttcaccagtg
tgtacggtgcagatgtcagacacaaaggactccccagcaccgatcccactgctggctgct
gccctcagagctgatgcacggtctgtgctgctggcctacggcaaccacctacagcctgtg
atggagaaagtagagatcaacacagcagagagacatgtctgtttgacccgggatgttcag
accaacttgtccctttccatggagtccaccgtttccaaggtcaaaacccctattgtcaac
gccaagagcagagtcttggtcccaggacttcctggtcaccaagccccagtcaagggaacc
tcacagggatcagagaagaggaaaaaagacacagacaccaaagagatgtcaatagcggag
cgactgggtgaaatcgatctctctacagtctccactgagaagggggctcctaaagggacg
gcctctttacaaacggacaattttgcagttctgctggtgcagggcctggagagtaacgat
gccaacatcctaaataaagtttttcagactcgtaaagagatggtgataaagaaaacagtt
gctcggttacccctccctgctgttttacctttggtggaagagatcacaaaaagactccag
gggcacccttttacggcagttttaatggtacggtggctcaaggctgtgctcatgcaccat
acatcatacctggcatcgctgcccgacctggttacccagctgggagtgctttatcacatg
attgagagcagagtgaagatgttccacaagctaacaaagctgcatggaaaactgtatctc
ctaatgacacaggtggcgacaagtgacagcagcaacacagttacagatgttgaccacaca
gctaagctggtgtatgaagaagaatcatctgatgaagatgaggcctctggtgacgaaggt
cttcctgatgatgatgacgactctgataactgggaagaggaggaggtgatggaagacgac
aaggaggaaccagcagacgaggaaaacgatgatccagacagcaggacagattccaaagca
aacggagaggaggacatggagcacggaaacgagagcgaagaggagtga
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