Perca flavescens (yellow perch): 114547658
Help
Entry
114547658 CDS
T07494
Symbol
cdrt1
Name
(RefSeq) CMT1A duplicated region transcript 1 protein
KO
K10266
F-box and WD-40 domain protein 10
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114547658 (cdrt1)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114547658 (cdrt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_DCAF4
F-box-like
WD40_like
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
F-box
Motif
Other DBs
NCBI-GeneID:
114547658
NCBI-ProteinID:
XP_028422735
LinkDB
All DBs
Position
21:7911750..7918707
Genome browser
AA seq
923 aa
AA seq
DB search
MKSVKSGRSVSACKLDSKTAEGCLYMCGICPFCAFAPKPPASSRCLWKVSDEFKRRFMVE
LLLRCKTIQVLESIQSVLGETCWTLLTYARARSPTSPEEYPWRGTDRPQDGKPLGMDMNE
IWDWFNSSPDWMKSCYLCRLLSLCDSELLRMVANLTSVLLVRQKRGFLQFNASSRRTSRH
YRVSDDDPALMVVPGSSKSVSGVSRYLDFIGCLPVDLSKRILGLLDEPTLRRCQKVCQYW
WQLAQETVEEIKFRRLFQDQIMAMMKMSKGNNIVSSTYANIVEVPVPVKDDETGDIHPSV
QKVKPFEGAYAKIQTKTVQMEERNVYCGAYFTTVLLDKVDPQRVMDYRGGSFMAMGSKDR
VVRLLYVESETKVVLVMKGHVGGIRAVLLCEDRDLLITASSDASIRCWSLKNAKCLMMLY
GHTGTVNCLDVHDDRLVSGAKDCIVKVWSLHTGKHFEDFHFKHPSPVQCVRIKTRTVYSS
CDRGLVKIWDMENASLLRVIDAHRSSVKCLFVDEWHFLSGDCSGQVMAWSISCGAKERLM
TFSHPKEVRSLTLVYLRVITGCVDGKIRIFHFLTGDCLRDIRAEAETGRILSLHFHDNRI
LVNTTSGVKRYQFAKVFWDYTERGQGDVVAQEGLVSEKSAASLRKLPFASVRDDRNNRKP
ERAEPHYHTCFLPSSTKCQAQARERCATAKQSVMLSEKATSERIKRRGLHHPLTRDSILL
RVNAIQKAQCTDEVSINMEWNARLRDSWGPHTSQDPLHCDLKQSLQSQTWHTHDVHPRRA
KTCLPILKRAVSHKMANTIKGSNVSTAPDCSFSKKEQPHSADTHRAIKRESGFTTSATDG
PQAPECMVMISLPNPEHSMKTSSRWPRISPVSVKGPFREQGGFRLLTVNQLEDCWAKKDL
MHNCEQNLSNRNKKPEKTLKKVT
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgttaaatctggtagaagtgtgtcggcgtgcaagctggactctaaaacggcg
gagggttgtctctacatgtgcgggatatgtccattttgcgcgtttgcccccaaaccaccg
gcttcctcgcggtgtttgtggaaggtgtcggatgaattcaagaggaggttcatggtggag
ctgcttttacgttgcaaaaccatccaagtgctcgaaagcatccagagtgtgctgggtgaa
acttgttggactttattaacttacgccagggcgaggagtcccacttcacctgaggaatac
ccgtggcgcgggacagaccggccgcaggatgggaagccactgggcatggacatgaatgag
atctgggactggttcaacagcagccctgactggatgaaatcctgttatctctgccgtctt
ctctcactctgtgactcggaactgttacgcatggtggctaatttaaccagcgtgcttctg
gtcagacaaaaacgaggttttctgcaatttaatgcgagtagtcgcaggaccagtcggcat
tatcgggtcagcgatgatgaccccgctcttatggtggtgcctggatcctcaaagtccgtg
tctggagtcagccggtacctagacttcataggctgcctaccagttgatctgtcgaagagg
atactaggtctgttagatgagcccactttgagacgctgccagaaggtttgtcagtactgg
tggcaactagcacaggaaacagtggaggaaatcaagttccgaagactttttcaggatcaa
attatggcaatgatgaagatgtccaaaggtaataatatagtcagttctacttacgccaac
atcgttgaagtcccggtacccgtcaaggatgatgaaacgggggatattcatcctagtgtc
caaaaggtcaagccatttgaaggagcttatgccaaaatccaaaccaagacggtgcaaatg
gaagagcgcaatgtttattgtggtgcatactttaccacagtgctgctggacaaagtggac
ccacagcgggtaatggactacagaggtggatcgtttatggcgatgggctccaaggaccgc
gtggtgcgtctgctttatgtggagtcggaaacaaaagtcgtgttagtgatgaagggccat
gttggcggcatccgggcagtgctgctatgcgaggacagagacctgctgataacggcgagc
agcgatgcgagtatcagatgttggagtttgaagaatgccaagtgtttgatgatgctgtac
ggtcacactggcaccgtcaactgcctggatgtccacgatgacagacttgtgtcaggagcc
aaagactgtatagtaaaagtgtggagtctacacacagggaagcattttgaggattttcat
ttcaagcaccccagtcctgtccagtgtgtgaggatcaagacaaggacggtctacagcagc
tgtgatcggggccttgtcaaaatatgggacatggagaatgcatcgttgctcagggtgatt
gatgcccacaggagctcagtgaagtgcctgtttgtcgacgaatggcactttttatcgggg
gactgcagcggtcaggtcatggcctggagcatcagctgtggcgctaaagagcgcctcatg
acctttagccacccaaaggaggtcagatctctgactctcgtctacctccgtgtcattact
ggctgtgtggacggaaagattcgcatatttcatttcctcaccggagattgtctgagagac
atcagggcagaggctgaaacaggacgaatactgtccctgcacttccatgacaaccgtata
ttagtgaacacgacatccggtgtgaagcgttaccagtttgccaaagtgttctgggattac
acagagagaggccaaggtgacgtggtggctcaggagggtttggtttctgagaaatcggca
gcttcgctcagaaagcttcccttcgcctctgtcagggacgaccgtaacaaccggaaacca
gagagagctgagccgcactaccacacctgcttcctgcctagctccactaaatgtcaagca
caagccagagagcgctgtgcgactgctaaacagtcagtgatgctgagtgagaaggcaacg
agtgaacggatcaagaggagggggcttcatcatcctctgacacgtgactccatcctcctc
agggtcaacgccatccagaaggcgcagtgcacggatgaagtcagcatcaacatggagtgg
aacgccaggctgcgagattcctggggccctcacacgtctcaggatcctctgcactgtgac
ctgaagcagagcctgcagagtcagacgtggcacacacacgatgttcatcccaggagggcc
aagacctgtcttccaattttaaagagagctgtcagtcacaaaatggcaaacacaatcaaa
ggcagcaatgtctccactgccccggactgttcattttctaaaaaagaacagcctcacagt
gccgacacacatagggccatcaagagagagagtggatttacaacaagtgccacagacggg
ccacaggctcctgagtgcatggtcatgatttcgctacctaatccggagcactccatgaaa
actagcagccgctggcccaggatcagccctgtgtctgtgaaaggtccattcagagagcag
ggaggattcaggctgctcacagtgaaccagctggaagattgttgggccaagaaggatctc
atgcacaactgtgagcaaaacctgtccaacaggaataagaagccggagaaaacactgaag
aaagtcacataa
DBGET
integrated database retrieval system
