KEGG   Perca flavescens (yellow perch): 114548162
Entry
114548162         CDS       T07494                                 
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
pflv  Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pflv03037]
    114548162 (ift140)
Cilium and associated proteins [BR:pflv03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   114548162 (ift140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd TPR_IFT80_172 Beta-prop_HPS5 WDR55 Clathrin TPR_GEMI5 WD40_Prp19 TPR_COPA_B Beta-prop_CAF1B_HIR1 TPR_12 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st RNase_HII tRNA_int_end_N2 Beta-prop_RSE1_2nd Consortin_N TPR_2
Other DBs
NCBI-GeneID: 114548162
NCBI-ProteinID: XP_028423726
LinkDB
Position
21:complement(16923786..16948157)
AA seq 1449 aa
MAVYFDHRIEAPESSGVPSQLTWHSALPVLAVASSSPTTGGNVDLYLQQGEYVEGCHLER
PYQLTVLRWHPTKPVLALGWENGEVVLLTHPAGDQTVLPSTHATCITLLEWSSSGSRLVT
GDQTGALAVWKVDARGRLQGNHLVKHEYNKPLTCCIFRPASPGDDVAMLARASVSGDESA
LDMFSWKGAPLKMGPQEGLTFYVSTADGKVHSVDEHCKTKLLLSVEGEIKKLLYLEKREL
LAVITETLMLSQYTLGPEGGAQEVMKVKLSSKTGQNVDIVWTKNGLLITATGEQVIRLWD
LDGDDNYVLPLDETLGFEKGEMMNCVSYCPGKEILAAGTSHGRIAMWKMVVQPGGSRGDT
KVQWKLQTPTEIEGNVIQLQWGSSLNLLAANNSNTVLILCEHVMSAHFSQQVAAVQLTPT
QLSITQFTTGAHLTLQSDIHIKGVCVTNDSVTVWSGKQVTVYELSGTVLRNTGSFPCDSH
IVAVHFENLYTVEPNRVQIRTPQGTVKQLLTFSKSEGNPVLLSVCQSYLVVGTDTAHIRV
FDLSRRDAKAHCSAKNLVDQIANLGALRSVKCNANGSQVSILISQVNGRPDHKVYFYDVE
MDTVTHFDFFVGRPSSGILQREESEKHQFQGTELSSRCPVFHFWDESEPRLFVCETVPIS
SESSSTSFLDAVDVLVVTLFCTQEHGLLLHDCYPKSSGLQALLALDVPYYYFSCKPGVRD
SGSAEISATTSAPPQQTQPSRGSATQFPHMVSRRALRDFVGLENCEKATRDAMVNFSFYL
TTGDMDEAFKSIKLIKSKAVWENMARMCVKTRRLDVARVCLGNMGNARAAKALKEAEAEP
EPEAQVAMLAIQLGMLDDAEKLYKCCQRYDLLNNFYQASGQWQQALETAENHDRIHLRTT
YYNYAKYLESIGDKTLALTYYEHSDTHRVEVPRMLQDDTSSLEIYVNKMKDKNIYKWWAQ
YLESQSDMDSALRFYECAQDYLSLVRVHCYMGNIQKASEIANDTGDRAASYHLARHYEGH
DDIKQAVHFYTRAQAYNNAIRLCKENGLDDQLMNLALLSNAEDMMEAACYYEEKGTHMDR
AVALFHKAGYVSKALELAFATQQFSALQLIAEDLNEYSDPALLARCSDFFITHSQYEKAV
ELLVAAKKYHQALELCVTQSLTITEELAERMTVTDSKDLSEEARKELLERIADCCMRQGN
YHLATKKYTQAGNKSKAMRALLKSGDTEKIVFFANVCRQKELFIMAANYLQSLDWRKNPE
ILKTIIGFYTKGRAPDLLAGFYEACAQVEIDDYQNYEKALDALTEAFKCLSKAKDSSTGQ
QEVRLADLQHRVTLIKKFVHARRLYTEDANEAVRLCEALLEEPELDPAVRIGDAFGFLVE
HHCQQGNFQVAYRKLEELQRILPSQNVRYYVSQASLESLQKEMGVPMDRGDNKQGVKEED
EVEEDLNVS
NT seq 4350 nt   +upstreamnt  +downstreamnt
atggcggtgtattttgaccaccgtattgaggcccctgaaagcagtggtgtgccctctcag
ttgacctggcactcagctcttcctgtactggctgtggcctcaagcagccccaccactggc
ggcaatgtagacctctacctgcagcagggagagtatgtggagggctgccatttagaacgt
ccttaccagctcacagtgctgcgctggcatcccacaaagccagtgttggcactaggctgg
gagaatggagaggtagtgctgctgacacaccctgctggagatcaaacagtccttcccagc
acacatgcaacctgcatcacactgctggagtggagtagctctggcagccgcttggttact
ggtgatcagactggagcactagcagtatggaaggtagatgctagagggagacttcaagga
aaccatcttgtgaagcatgaatacaacaaacctctaacttgctgcatcttcagaccggcc
tcgcctggggacgatgtagcaatgctagcccgagcatcagttagtggtgatgagagtgct
ctggacatgttcagctggaagggagcccctctcaagatgggcccacaggagggactcaca
ttctacgtcagcactgcagatggtaaggtccacagtgtggatgagcattgtaagacaaaa
cttcttctcagtgtggagggcgaaatcaagaaactgctctacctcgagaaaagagagttg
cttgctgtgatcacagagaccctgatgttgtcacagtacactcttggacctgagggagga
gcccaggaagttatgaaggttaagttgagcagcaagacagggcagaatgtagacattgtc
tggacaaagaatggcctcctcatcacagcaacaggggaacaggttatcaggctgtgggac
ctcgacggagatgacaactatgttttacctctcgatgagactctggggtttgagaaagga
gagatgatgaactgtgtctcatactgtcctggaaaagaaatcttggcagctggtaccagc
catgggcgcatagcaatgtggaagatggtggtgcagccaggcggcagcagaggggatacc
aaggtccagtggaagctacagacacccacagaaatagaaggaaatgtcattcagctacag
tggggctcgagtctgaatctgctagcggccaacaattcgaacacggtgctgatcctgtgt
gagcatgtgatgtcggcccacttcagccagcaggtggcagcagtgcagctcaccccaacc
cagctcagcatcactcagttcaccacaggagcgcacctgactctgcagtctgacatacac
atcaagggagtttgtgttactaatgattctgtgacagtctggagtggcaagcaggtcact
gtatatgagctttcggggacagttcttcgcaatacaggatcgtttccttgtgactcccat
atcgtagctgtacattttgagaacctctacactgtggaacctaacagggtccagattcgc
acgccacagggcacagtgaagcagctgctgaccttctccaagtcagagggcaaccctgta
ctactcagtgtgtgtcagtcttacctggtggttggcacagacacagcacacattagagtc
tttgacctctcccgaagagatgccaaagctcactgcagtgctaagaacctggttgaccag
attgctaatctgggagccctgaggtcagtcaaatgtaatgccaacggcagccaagtcagc
atcctaatctctcaggttaacgggcgaccggatcacaaagtttacttttatgacgtcgag
atggacacggtgacacactttgacttctttgttggcagaccatccagtggtatattacag
cgagaagaaagtgaaaagcatcagtttcaggggacagagctcagcagtcgctgccctgta
tttcacttctgggatgagagtgaacctcgtctttttgtctgtgagacggtgccgatcagc
tctgaatcctcatcaactagtttcttggatgcggtggacgtgttggtagtgacactcttc
tgtacgcaggagcatgggctcctcctacacgactgctacccaaaatcttcaggcctgcag
gcgctcctcgctctggatgtgccctactattatttcagctgcaagcccggtgtgagagac
tcagggtcagcagagatttcagccacaacatcagcacctccacagcagacccagccatca
aggggttcagctacccagttcccccacatggtatccaggcgagctctcagagactttgtg
gggctggagaactgtgagaaggccacccgcgacgccatggtcaacttcagcttctacctg
accactggcgatatggacgaagccttcaagtctatcaagctcatcaagagtaaagcggta
tgggaaaacatggcacggatgtgtgtgaaaacccgccggctggatgtggcgcgtgtgtgc
cttgggaatatgggaaatgccagggcagcaaaagccctgaaagaggccgaggctgagcct
gaaccagaagcccaagtggctatgttggccattcagctcggcatgttggatgatgcagaa
aagttgtacaagtgctgtcaacgttatgacctgctgaacaatttctaccaggcttctggc
caatggcagcaagctttggaaacagcagagaaccatgatcgcatccatctgcgcaccacc
tactacaattatgccaaatacctggagtccattggcgacaagaccctggccctcacatat
tatgagcattcagacacacacagggtcgaagtgcccagaatgctccaggatgacacgtcg
tctctagagatctacgttaacaaaatgaaagacaagaacatctataagtggtgggcccag
tacctggaaagccagtcagacatggattcagcgctgcgtttttacgaatgtgcccaggat
tacctctccctggttcgagtacactgttacatggggaacattcagaaggcatctgagata
gccaatgacacaggtgacagggcagcgtcataccacctggccagacactatgagggccat
gatgatatcaaacaggctgtccacttctacacacgagcccaggcctacaacaatgccata
cgactttgtaaggagaatggtctggatgaccaactgatgaacctggctctgctgagtaat
gctgaggacatgatggaggctgcctgttactacgaggagaaaggcacccacatggaccga
gctgtcgcactgttccacaaggctggttacgtctccaaagctctagagttggcctttgcc
acccagcagttttctgcacttcagctgatcgctgaggatctaaatgagtactctgaccca
gccctactggcccgctgctctgacttctttatcacgcattcccagtatgagaaggctgtg
gagttactggtagcagccaagaagtaccatcaagccttggagttgtgtgtgacccagagc
ttaaccatcacagaggagctggcagagagaatgactgtaactgattcaaaagacttgtct
gaagaggcccgaaaggagctgcttgagaggatagcggactgctgcatgcgtcagggcaac
taccacctggccaccaagaaatacacacaggcgggcaacaagtccaaggccatgagggcc
ctgctaaagtcaggcgacacagagaaaatagtattcttcgccaatgtttgtcgtcagaag
gagcttttcatcatggctgccaactacctccagtctctggactggcggaaaaatccagag
atcttgaagacaatcattggtttctacactaaaggcagggcaccggacctgctggctggc
ttttatgaagcctgtgctcaggttgagattgatgattaccagaactatgaaaaggctcta
gatgctttgactgaggcgttcaagtgcctctcaaaagcaaaagactcttcaactggacaa
caggaagtaagactggccgacctgcagcatagagtcacgctaatcaagaagtttgtccac
gcacgcaggttgtatacggaggatgctaatgaggcggtgcggttatgtgaagctctgctg
gaggagccggagttggaccctgctgtcaggattggagatgcatttggtttcctggtggag
caccactgtcagcaaggcaacttccaagtggcctaccgtaaactggaggagctccaaagg
attttgccgtcacagaacgtcaggtactatgttagccaagccagcctagagtccctgcaa
aaagagatgggtgtacccatggatcgtggtgacaacaagcaaggtgtgaaggaggaggac
gaagtggaggaggacttaaatgtatcttaa

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