Perca flavescens (yellow perch): 114548416
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Entry
114548416 CDS
T07494
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114548416 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114548416 (taf5l)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114548416 (taf5l)
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114548416 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
114548416 (taf5l)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
114548416 (taf5l)
STAGA complex
114548416 (taf5l)
TFTC complex
114548416 (taf5l)
SAGA complex
114548416 (taf5l)
SLIK complex
114548416 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
TFIID_NTD2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_DCAF4
Tricorn_2nd
Beta-prop_WDR19_1st
PEP5_VPS11_N
Beta-prop_IP5PC_F
PROPPIN
WD40_like
WD_LRWD1
Nbas_N
TRIP13_N
Motif
Other DBs
NCBI-GeneID:
114548416
NCBI-ProteinID:
XP_028424173
LinkDB
All DBs
Position
2:complement(6323088..6332845)
Genome browser
AA seq
602 aa
AA seq
DB search
MKRVRTEQIQHAVTQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTAQTESGCADIVSAA
PCQSDPQQYETQYSRLRSFLSETEISWAKEVSSLLYPLFVYLHLDMVRCGLKGAVDGFYG
RFHGAFLQDAEQRATIEQLRHLLTAQDVAANPKLSAFLQHKYVVHLTEPAYSYLLRYLQS
EDNGALCRALSTHLQVEVSSSRRTDYQLYGAAGGATAAPNSTSASSWAGVDSAEGGEGLE
VPAGIPQSEAALEALQDCIKKVREGPPTLTTVCFYAFHHTEQTLNAAEVSADSRLLAGGF
DSSTVKLWSLRARKLKAKPHRADVSLIHLACDVLEEEADEEDSSGSEIKTLRAHSGPVFR
TAFLTDSSGLLSCSEDTTIRYWDLGSFANTALYRGHAYPVWDVDVSPCSLYFASGSHDRT
ARLWTFSRTYPLRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGH
RGPVLSLAFSPNGKYLASAGEDQRVKLWDLASGALFKDLRGHTDSVTSLSFSPDSSLVAS
SSIDNSVRVWDIRNSHGGTPADGSSGELVGLYAGNTSNVLNVQFMACNLLLVTGTAQEKA
EP
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgttcgcactgagcagatccagcatgccgtgactcagtacctgaagcggagg
cagtatgtggacacggacggctccctgaaaggagccaagctcttccagtcagcggaggag
atggctgccagcctcacagcgcagaccgagtcgggctgtgctgacatcgtctcggctgcc
ccctgccagtccgacccccagcagtacgagacccagtactccaggctgcgctcctttctg
tcagaaaccgaaatctcctgggcgaaggaggtgagcagcctcctctacccgctcttcgtc
tacctccacctggacatggtgcgctgcggcctgaaaggcgccgtggacggcttctacggc
cgtttccacggcgccttcctccaggacgccgagcagcgcgccaccatcgagcagctccgc
caccttctcaccgcgcaggacgtcgccgccaaccccaagctgagcgccttcctgcagcac
aagtacgtggtccacctgacggagccggcctacagctacctgctgcgctacctgcagagc
gaggacaacggcgccctctgccgggctctcagcacacacctgcaggtggaggtgtcctcc
tcgaggcgcaccgactaccagctgtacggcgctgccggcggggcgaccgcggccccgaac
tccacctccgcctcctcctgggcgggcgtggactccgcggagggcggcgagggtttggag
gtccccgcggggatcccgcagagcgaggcggcccttgaggcgctgcaggactgcatcaag
aaggtccgcgagggccccccgacgctcaccaccgtgtgcttctacgccttccaccacacg
gagcagacgctgaacgcggccgaggtgtcggccgacagccggctgctggccggcggcttc
gacagctccacggtgaagctgtggagcctccgggccaggaagctgaaggccaaaccgcac
cgcgccgacgtgtcgctcatccacctggcctgcgacgtactggaggaggaagcggatgaa
gaggactcctccggcagcgagatcaagacgctgcgagctcacagcggcccggtgtttcgc
accgccttcctgacggacagctcgggcctgctctcctgctccgaggacaccaccatccgc
tactgggacctgggcagcttcgccaacacggcgctgtaccggggccacgcctacccggtg
tgggacgtggacgtgagcccctgcagcctctacttcgccagcggctcgcacgaccgcacc
gcgcgcctctggaccttctcgcgcacctacccgctgcggctctacgccgggcacctcgcc
gacgtcgactgcgtcaagttccacccgaactccaactacctggccacgggctccacggac
aagaccgtgcgtctgtggagcacccagcagggcgcgtcggtccgcctcttcacgggccac
cgcggcccggtgctgtccctcgccttctcccccaacgggaagtacttggcgtcggccggc
gaggaccagcgggtgaagctgtgggacctggcgtcgggcgcgttgttcaaagacctgcgc
gggcacacggacagcgtcaccagcctgtccttcagccccgacagcagcctggtggcctcg
tcgtccatagacaactcggtgcgggtgtgggacatcaggaactcccacggcgggacgccg
gccgacgggtcatccggcgagctggtgggactgtacgccgggaacaccagcaacgtgctc
aacgtccagttcatggcctgcaacctgctgctggtcaccgggacagcgcaggagaaagca
gaaccgtag
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