Perca flavescens (yellow perch): 114548594
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Entry
114548594 CDS
T07494
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114548594
03036 Chromosome and associated proteins [BR:
pflv03036
]
114548594
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114548594
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Gene silencing
piRNA pathway
114548594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
114548594
NCBI-ProteinID:
XP_028424383
LinkDB
All DBs
Position
21:complement(20024980..20054002)
Genome browser
AA seq
2134 aa
AA seq
DB search
MEDKKRKKDDKRKREASQKVTEQKNKVPDLTKPASAQSPVTQSSSASPSPGPTPSVSPSP
ATLGPGSAATPSQGGNNAKRLAVANGQPTSTTISSSTAGALSAAGNGSTSSGGGAQAPQQ
QPRYMPREVPPRFRCQQDHKVLLKRGQPPLSSMLLGGGGGGGGGDGPNANLAAVSDSGAA
ASSLALTSSSVAASTTTSNYANSMWGASSGSQASSQGREKVIVDGNDLEEWPSIAGSDGG
GASFTGAGGGSSNNGMPVNSISASGNQSSPTSSFSLPNECMQSSNGVAWGMAASQGHLGG
GNAVAAAGPLLQQPSSLSKASAVPGSHDASGPVEGSSGIPGANFNPNANPSAWPALVQQD
GPAAAGEGGPSSFHHQGPVGSLSANNSASLGLGLGGAAVGVLGGHPPLSVNQSSTHQRQL
HQMQSRDREMGGGKWDSESAGPKIAGGEGIGGMDRGVGGGEMSVGDHSLTSSWRGQSSYP
AANSKTGASRTDGWEGGAGGTGGFGAAEGDNGTSGWGYQSSTTGVNAWGSAGTGANSSQT
SGVSQGGWGSAGVGGERGVSGVDWGGSSTSTGGANPGGDGIGGACSSNSSSSGGSTAGNP
PATSSSSSTATTTTRAWDNQKGESETGEWGGGVDRQGAQGGSSSSGGNSRNGSRSNSSHS
RPPPRSAPNAEAALQNLLSRSDLDPRVLSNTGWGQTQIRQNTSWEFEEHGGQIKGGSSST
TSKHASSLGGSSQYSGGPRTLMTDSMGPGVSPSLVPSAASPVEGWESSSNSSSSGASLSG
RAPPPSGPNMRNLGVSQSGPVNTTGPGIGSGAMPGHSQQGKATGWGGGGMGAGDGQQAKG
WGNEEWRDSSRGGNGGGWGDLGQQGDPVSGGWGGNKEEKGTGGWKEMGGNGGGSGWGSGP
KAGAGRDWGEQQSKSNSGGGGWENERKNGGGNSGGDSGVGSWGSWDDGAPRRTWGAGGTG
GGGSGGGGGVGVAGGMGSKPHQSWSGGNKMHQMPNSQPGSITGPPAQLQQSQPRNQHPQR
QQALDQGAMQGVGGRKPISQAQNQNQSSGWTSGPIPGGSIGGGSTSEPSGWEEPSPQSIS
RKNEIDDGTSAWGDPTHYNYKPVNLWDKNSAPAGQQPHDQPQPQAQQQQPQAPPIQQQPS
RQAAGLGGNRDFNTGHGPGKTSAIGPSGWSGTSPTSPSVDTGTAAWGKTTDAPTGWGEPD
DVGGKTTGWGNPSPIPTKSGSKSMQDGWGDKEGSVAASRHSSWEEEEEGGGGGMWNSAGS
QGSGSSWGQGSNGGWGQNHTGKKPSNKGPLKAGGGDSWMSPINRQFSNMGLLNDDPSGPN
IDLAPGSLQEKKMDAEKRGMGMGMNDYNGDMRKGGRGGGGMAYRPPGSKEAAPGDAGSYY
DKTLPLTNQDWCLGEEGPCSLYSPPTVYKPHSLFNHTIPFRQGSHSIFGSSGGMAQSRHQ
PSVPPINQSPGIRAQVPHQFLSPQVPGSVLKQMPPPSGSVGGVGGVAGVGGGVFPPQLSP
QHIAMLSSIYPPHIQFQLACQLLLQQQQQQPQPQQLLQNQRKFTPNVRQQTDPQQLARIM
AVLQQQRQQQQVGGLGGSSKLSPSHHGGGVGPKLPGVDTMHHPGLAGSVADLHQKTLGPY
SAGFGSGVNLPGLDLGGSVVGGPGGMKDLGIQQSRFKWMMEGHSSPDTSSPENAFHKNGP
VPPMKMPGGSPYSQYDMMVGDGLGDNWHRTPGNKMGTKPTPTPSWPPEFQPGVPWKGIDR
VDPDSDPYMTPGSMMGNAVSPNLNDTEHQLLQDNTDPTPPLNTLLPSPGAWPYSASDSPL
NHAHNSAKYIDYKTSWPPEPIGHKSWKATRGSSQNQLSQLSRPPPGLASQKQPSPSPWSG
GAPRLAGRGWGGGSSTTASTWSDGSSRESCWLVLSNLTPQIDGSTLRTICMQHGPLLTFH
LGLTQGTALIRYSSKQEAAKAQSALHMCVLGNTTILAEFVSEEDVARYIAHSQAGGAGSG
GTTAGSAGSGPTASSAVGANGNGGSCERGGAGSSGGGGVEGGSTAGGAGNGGAGPSSSGW
QSLDSTGSSSDQSSTQGPGLGIFTQWSSNGTGVGGAGGMEAGRQGLWGGMGGMSGAGYPS
SSLWGSPALEDRHQMGSPASLLPGDLLGGGADSI
NT seq
6405 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaaaaaagacgacaaaaggaaaagggaagcctctcagaaggtc
acagaacaaaaaaacaaagtgccagacttgaccaagccggcatctgcccagtctcctgtc
actcagagcagctctgcctcccccagccctggacccaccccctctgtctccccatcccca
gccaccttgggccctggcagtgctgccaccccgtcacagggcggcaacaatgccaagcgc
ctggcggtggccaacggacagcccacctccaccaccatttcttcctccaccgctggcgcc
ctcagtgctgccggaaacggcagtacaagtagcggaggcggtgcccaggcgcctcagcag
caaccgcgctacatgccgagagaagtgccgccgcgattccgctgccagcaggaccataaa
gtgctactgaagaggggtcagccgccattgtcctccatgctgctgggagggggaggagga
ggaggaggaggggatggccccaatgcaaacttggctgctgtctcagattctggtgcagct
gcctcctcattggccctcacctcatcatcagttgctgcttctactactacttctaattat
gcaaattccatgtggggggcgagctcaggcagccaggcctcctctcagggcagggagaag
gtgatcgttgatggcaacgacctggaggaatggcctagcatcgctggcagtgatggagga
ggagcttctttcaccggggctggagggggcagcagcaacaacggaatgcctgtgaacagc
attagtgcctctggcaaccaatcctcacccacttcctcgttctctttgcccaatgaatgt
atgcagtcgtccaacggtgtggcgtgggggatggctgcctcccagggtcatcttggagga
gggaatgcggtagctgcagctgggcctctgctacaacagccctcctcactttccaaagcc
tccgctgtgccagggagccatgacgccagtggccccgtcgaaggcagcagtgggattcca
ggtgccaacttcaatccaaatgccaacccttcggcctggcctgccctggtgcagcaggat
gggcccgctgctgcaggggagggaggtccatcttccttccatcaccagggccctgtaggg
tctttgtctgccaacaactccgcttccctgggcctggggctgggaggcgcggcagtcggg
gtgctggggggtcacccacctttatctgtgaatcaatcaagcacccatcagcggcaactt
caccaaatgcaatcacgagacagagagatgggaggggggaagtgggacagcgaatcagcg
ggaccaaaaatcgcagggggggaaggaattgggggaatggaccgtggtgttggaggaggc
gagatgagtgtgggagaccacagcctcacctcctcatggagaggccagtcttcttaccct
gcagctaactccaaaacgggtgcctcaagaactgatggatgggagggtggagcaggtggc
acagggggattcggagctgctgaaggagataatgggacatctggttgggggtatcagagt
tccactactggggtaaatgcttggggcagtgctggaactggggcaaacagtagtcaaacc
tccggggtatctcagggagggtgggggtcagcaggagtaggaggggagagaggggtttct
ggtgttgattggggtgggagctccaccagtactggtggagctaatccaggaggtgatgga
attggtggagcctgcagcagtaacagcagcagtagtgggggcagcacagctggcaacccc
cctgccacctcctcctcttcctcaacagccaccactacaaccagagcttgggacaatcaa
aagggggagagtgaaacaggggaatggggtgggggagtagacagacagggagcacaggga
ggatcctcatccagtggtggaaattccagaaacgggagcaggtctaacagtagtcacagt
cgacctcctccccgctctgcacctaacgctgaagctgccttacagaacctgcttagccgg
tctgatttggaccctcgggtcctgtccaacacaggctggggccaaacacagatccgacaa
aacacgtcctgggagtttgaagaacatggaggacagattaaaggtggatcgtcatcaact
acatcgaaacacgcatcttctcttggtggttcttctcagtattctggaggacccagaact
ctaatgactgattctatgggtccaggggtcagtccttccctggttccatctgctgcgtcc
cccgtagagggctgggaaagcagcagcaacagtagcagtagtggggcctctctgtctggg
agagccccaccaccgtcaggccccaacatgaggaatcttggcgtctcacaatctgggcca
gtgaacacaacgggacctggtatagggtcaggggcaatgccaggacatagccagcagggg
aaggctacaggctggggtggaggagggatgggggctggggatggccagcaggcaaagggc
tgggggaatgaggaatggagagacagtagtagaggaggaaatggaggaggatggggtgat
cttgggcaacagggagacccagtgagtggaggctggggaggaaataaggaggagaaaggg
acaggggggtggaaagaaatgggagggaatggaggagggagtgggtggggatcaggaccg
aaggctggggcaggtagggattggggagagcaacagtctaaatcaaatagcggaggaggg
ggatgggagaatgagaggaagaatggaggaggaaactcaggtggggattcaggtgtgggt
agttgggggagctgggatgatggtgctcctcggagaacctggggagcagggggcacaggg
ggaggagggagtggaggaggagggggggtgggtgttgctgggggcatggggtccaaaccc
catcaaagttggagtggaggaaacaaaatgcaccagatgccaaacagccagccgggctcc
atcacaggcccaccggcacaactgcaacaatcgcagccccgcaatcagcatccacagcga
cagcaagcgttggaccaaggggctatgcaaggagtcggggggaggaaacccatctctcaa
gcccagaatcagaaccaaagctcaggctggacctcggggcccatccctggtggctccata
gggggtggaagcacttctgaacccagcggctgggaggaaccctcaccgcagtctataagc
aggaagaacgagatagatgatggaacatcagcatggggagacccaacccattacaactac
aagccggtcaacctgtgggataagaacagcgcccctgctgggcagcagccgcatgaccag
cctcagcctcaggctcaacaacagcaaccacaggcacctccgatacagcagcagcctagc
aggcaggccgcagggctaggaggtaaccgagacttcaacactggccatggacctggaaaa
acttcagctataggtccatcaggttggagtggcacttctccaactagtccttcagtagac
actggcacggcagcttggggaaagactactgatgcccctactggctggggagagcctgat
gatgttggagggaagacaacgggctggggaaacccttctcccatccccaccaaatctggt
tcaaagtctatgcaagatggctggggagacaaagagggctctgtggctgcctcgcgtcac
tcaagctgggaggaggaggaggagggtggcggcggtggcatgtggaacagcgccggctcc
cagggaagcggctcgtcttggggacagggaagcaatgggggctggggacagaaccacact
gggaagaagcccagcaacaagggtccactgaaagctggtggaggggactcgtggatgagc
cccatcaacagacagttctccaacatggggctgctgaatgatgatcccagtggcccaaac
attgacctggcaccaggttctctacaggagaagaagatggatgcggagaaaagaggcatg
ggaatggggatgaacgattacaatggagacatgaggaaaggaggaaggggaggagggggg
atggcttatcgtccacctggttccaaagaggcagcacctggcgatgctgggtcctactat
gacaagaccttgcctttgaccaatcaggattggtgccttggggaggagggtccttgctct
ctgtattcaccacccactgtctacaagccccattccctcttcaaccacactattcccttt
agacaaggcagtcacagtatctttggcagtagtggagggatggctcagtcaagacaccag
ccaagtgtcccacccataaaccagtccccagggatacgagcgcaagtgcctcatcagttc
ctgtcacctcaggtgccaggctctgtgctgaagcagatgccccctcccagcgggagcgtg
gggggtgttggcggcgtggcaggagtcgggggaggtgtgttccctccacagctgtccccc
cagcatatcgccatgctcagcagcatctacccacctcacatccagtttcagctggcttgt
cagctcctcctccagcagcagcagcagcagccgcaaccgcagcagctactgcaaaaccag
aggaagttcacgccgaacgtgcggcagcagactgaccctcaacagctggccaggataatg
gcggtgctccagcagcagaggcagcagcaacaggtcgggggtttaggcggcagctccaaa
ctctccccctcccaccatggtggaggtgttggtcccaaactgcccggggttgataccatg
caccacccaggcctggcaggatctgtggctgacctgcaccagaaaactctcgggccgtat
tccgcagggtttggttctggggtgaacctcccaggtctggacctgggtggctctgtagtg
gggggacctgggggcatgaaggacctagggattcagcagtcccgcttcaaatggatgatg
gaaggacactcttctccagacacctcctcacctgagaatgcattccacaaaaatggtcct
gtcccccccatgaagatgccaggcggctcgccctactctcagtatgacatgatggttgga
gacgggctgggagacaactggcatcgcacccctggcaacaagatgggtaccaagcctacc
cccacgcccagctggccccctgagttccagcctggtgtgccctggaagggaatcgaccgt
gtcgaccctgattctgacccttacatgaccccagggagcatgatgggaaacgcagtgtcc
cctaacctcaatgatactgagcaccagttgttacaagacaatactgatcccacccctccc
ctcaacaccttgctgccttcacctggtgcctggccctacagtgcctcagacagtcccctc
aaccacgcacacaactcagcaaagtacatagactacaagaccagctggcccccagagccc
atcggacacaagtcctggaaagcgactcgcggcagcagccagaaccagctgtcccagctt
tcccgcccacctccaggactagccagtcaaaagcagccatcgccttctccttggtctggc
ggagctcctcgattggctggccggggctggggcggtggctcgagcaccactgcctcgacc
tggagtgacggcagctctcgggaaagctgctggttggtgctcagcaacctcacaccacag
attgatggctccactctgaggaccatctgcatgcagcacggccctcttctgacctttcac
cttggcctgacccagggcaccgctctgattcgctacagctccaaacaggaggcagccaaa
gcccagagcgcactccacatgtgtgttctgggtaacaccaccatcttggcggagtttgtg
agcgaggaggatgtggctcgctacattgcacattcccaggcaggaggagcagggagtgga
ggaaccacggccggctctgcgggctccgggccgacggcatcctccgcggtgggggccaac
ggtaacggagggagctgcgagaggggtggcgcaggaagcagcggtgggggaggagtagaa
ggaggctccacagctggaggagcaggaaacggaggagccgggccttccagctccgggtgg
cagagtctggacagcacaggcagctcatcggaccagtcctccacccaggggcccgggctg
ggcatcttcacccagtggagcagcaatgggaccggggtgggcggggctggaggcatggag
gccggaagacagggtctgtggggggggatgggtgggatgagcggggcgggataccctagc
agtagcctctggggttccccagcacttgaggaccgtcaccagatgggcagccccgcctcg
ctgctgccaggggacctgctgggcgggggggctgactccatctga
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integrated database retrieval system
