Perca flavescens (yellow perch): 114548879
Help
Entry
114548879 CDS
T07494
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pflv03037
]
114548879 (nphp3)
Cilium and associated proteins [BR:
pflv03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
114548879 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
AAA_16
TPR_11
NACHT
TPR_19
KAP_NTPase
AAA_22
ATPase_2
TPR_6
AAA
T2SSE
AAA_14
AAA_19
Viral_helicase1
Macoilin
Motif
Other DBs
NCBI-GeneID:
114548879
NCBI-ProteinID:
XP_028424688
LinkDB
All DBs
Position
22:complement(16760485..16772142)
Genome browser
AA seq
1309 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEISSMQKKESKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ
GIQVYDLNDSDSDDNQTTVTAAGTQCEYWSGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHLPQALWSNTVRCYLIFTQETKAELDVFIKKHSP
VLRRMCERLGHFYLNVCFPEENAASYAVERKQEIERSSVCVLLVKSTVTSSVVEDCEEAF
VKNPDGHPLVLYLRTEEDHNLTGPTRELLERVNAADKAAKVKVVDHSGSAEEGAALIYSQ
LEKVIKQELLAFVGADVDSKDSGIEEGREEDSGDVLWDLHDEQEQIESYQQARSSTTSQL
GFQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIEQLQKQSPNTLFLYHFVGRP
LSTSSEPVLIIKRLTVKLLQHFWSISGLSMEPSKILEEFPRWLERLSARHQGNIIIIIDS
IDQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLSPREVRSVVNAE
CQSMDLKLTKDQEKKLERHCRSASTCNALYVTLLARMMISSIAGWSLEKSLEQCLQCQDT
MSLYRLALKMTLNSLNTDREQHIMREILCLVCASHNGVSESEVLDLFPELELPVLSSLLY
HLNRLCIVTLRCGLIRFQHLQAWEAVRLEFLGGGSSSASYREKLIQYFSQQLSQDCVTWR
VADELPWLFQQQEDRTKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFD
SLKHFEKSCESEDTMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPSV
ARSLHQLAGVYVQWKKYGNAEQLYKQALEISENAYGAEHASVARELESLAMLYQKQNKYE
QAEKLRKRSVKIRQKTARQKGHMYGFTLLRRRALQLEELTLGKDSADSAKTLNELGVLYY
LQNNLDAAKMFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYETSEDMYERALDI
RKRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELSLEIREKSFGPKHPSVATALVN
LAVIYCQLKKHSDALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEEGDFEKAAELY
KRAMEIKEAEPSLVCGNAPSRHSSSGDTFSLRGPAPLPHAPSRGFLKAE
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcatcctctttggtcagcccaggagaggtaattgaggatggatatggaggt
gaaggaggggaagcctgtgagatcccagttgaggtcaagcccaaagcccgactcctgcgc
agttcctttcgcagaggacctcgggtgattggggccagttttaaatccacaggttctgtg
gatctagagtatgctgctgagtatgaaagactccgtaaagagtatgaaatttttcgcgtc
agtaaaaataatgagatctcatccatgcaaaagaaggagtccaagctggatgaggagaac
aagaggctgagggctgagctacaggctctgcagaagacctaccagaagatccttagagaa
aaagagagtgctcttgaggcgaagtatcaagctatggagagggctgccacctttgaacat
gacagggacaaagtaaaacgacagtttaagattttccgggagacaaaagaaaaggagatt
caggatctcctgcgcgccaagagggacttggaggccaaactgcaacagttgcaagctcag
ggcattcaggtctatgacctaaatgattctgactcagatgacaaccaaaccacggttact
gctgcagggacacagtgtgagtactggtctggtggtgtgctgggaagtgagccctctatg
ggtagcatgatgcagttgcaacagacgttccgtggaccggagtttgcccacagtttgata
gatgtggagggaccctttgcaaatgtgagcagagatgattgggatgctgcagtggccagt
ctgcttcaggtctcccctcatttaccccaggccttatggagtaatacagtgcgctgctac
ctaatctttacccaggagaccaaagctgagcttgatgtctttattaagaaacactctccc
gtgttacggagaatgtgtgagcgtctaggccatttctacctgaatgtctgcttcccagag
gagaatgctgcctcttacgctgttgagcgcaagcaggagattgaaaggagctctgtgtgt
gtgcttcttgtcaaatctactgtcaccagctctgtggtggaggattgtgaggaggctttt
gtgaagaatccagatggccatccactagtgctctacctcaggactgaagaagatcacaat
ttgactggacccaccagggaactgctagaaagggtcaatgctgcagacaaggctgctaaa
gtcaaggtggtggatcatagtggttctgcagaagagggtgctgcactgatttattctcaa
cttgagaaagtcatcaaacaggagttgctggcttttgtaggagcagatgttgactctaag
gactctgggatagaggagggacgtgaggaagactcaggagacgtactgtgggacctgcat
gacgagcaggaacagattgagtcctaccagcaggcccgtagcagcaccacctcccagtta
ggcttccagaagtatatagatcgtttgaatgacatgatagctgctccccctcccacccct
cctctgctggtgtctggtggtccaggctcaggaaagtctctcctgctctccaaatggatt
gagcagctgcagaagcagtcccccaacaccttgttcctttatcattttgttggtcgccca
ctttccacaagctcagagccggttctcattatcaaacgtctcacagtcaaactgctgcag
cacttctggtctatttctggcttgtccatggagcccagtaagatcttagaagagtttcct
cgctggcttgaaagactatcagcacgccatcaaggaaacatcatcatcatcattgactcc
attgaccaaatacagcaagcagaaagacacatgaagtggctgattgaccctctccctgtt
aatgtcagagtggtggtgtctgtcaatgtagagacatgtcctcaagcttggaggttatgg
cccacactccatttagacccactgagtcccagagaggtcaggagcgttgttaatgcagag
tgccagagcatggatctcaaacttaccaaggaccaggagaagaagctggaaaggcactgt
cgctctgcatcaacctgcaatgcattgtatgtcacactactggcaagaatgatgatcagc
agtatagcaggttggtcactggagaagagcctggagcagtgtctacagtgccaggacacc
atgtcactctaccgcctggcactgaagatgacgctgaactcccttaacacagaccgagaa
caacacattatgagagagatactgtgccttgtatgtgccagccataatggagttagtgaa
tcagaggtactagaccttttcccagaactggagttgcctgtcctgtcctctctgctttac
catctgaacagactctgcattgtaaccctccgttgtgggctcatcaggtttcaacacctg
caggcttgggaagctgtgaggttggagttcctgggtggaggaagtagctcggcttcttac
agagagaaactcatacagtactttagtcagcaactcagccaggattgcgtgacgtggcgt
gttgcagatgaactgccatggctgttccaacagcaggaggataggactaaactacagctt
agcctcctgaacctgtttgtctcccaaaacctctacaaaaggggtcatttctctgagctg
ctagcctattggcaatatgtgggcaaagacaaaagctccatggccactgagtactttgac
tccctaaaacactttgagaagagctgtgagagcgaagacaccatgaccaagctggcaaac
ctgtatgagaccttgggacgtttcctcaaagacctgggcctccctagtcaggctgtagcg
cctttacagaggtcacttgagataagggagacagccttggacccagaccatcccagcgtt
gctcgctctctgcaccagctggccggagtttatgttcagtggaagaagtatggcaacgct
gagcagctgtacaagcaggccctggagataagtgagaatgcatatggagctgagcatgcc
agcgtagcacgagagctggagtcactcgccatgctctatcagaaacaaaacaaatatgaa
caagcagagaaactcaggaagaggtcagtgaagatccgtcagaagactgctcgccagaaa
ggtcatatgtatggcttcactttgttgaggcgcagagccctacagctggaagagctgacc
ctgggaaaagactctgcagactctgccaagacacttaatgaactgggtgtcttgtactac
ctccaaaacaacctggatgcagccaagatgttcttgacccgctctctggagatgcgtcag
cgtgtcctcggtccagatcacccagactgtgctcagtccctcaacaacctggctgcactg
cacacagagaggagggagtatgagacgtctgaagacatgtatgagagggcactagatatt
cgcaagagggccttgtccccagaccacccctcgctggcatacacactcaaacacctggcc
atgctctataaacgcagaggaaagctggaaaaggctgtgccactgtatgagctgtctctg
gaaatcagggaaaaaagttttgggcccaaacaccccagtgtggccacagcactggtcaac
ctggctgtaatctactgccaactaaagaagcacagtgacgccttgcctctttatgaacga
gcgctgaaagtgtatgaggatagtttggggcgttcacacccacgggtcggagagactcta
aaaaacttggctgtgctaagctatgaagagggtgactttgagaaagcagcagagctttac
aaacgtgcaatggagataaaggaggcagagccatcgttggtgtgtgggaacgccccgtcc
cgccactcctccagtggggacacattcagtctgaggggacctgctcccctcccacatgcc
ccgagcagaggttttcttaaagcggagtga
DBGET
integrated database retrieval system
