Perca flavescens (yellow perch): 114549053
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Entry
114549053 CDS
T07494
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04140
Autophagy - animal
pflv04148
Efferocytosis
pflv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114549053 (vps41)
04148 Efferocytosis
114549053 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114549053 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114549053 (vps41)
Membrane trafficking [BR:
pflv04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
114549053 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_HPS5
zf_RING_Vps8_fungal
Beta-prop_RIG_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Vps39_1
zf_RING_Vps8
TPR_7
TPR_PEP5_VPS11
TPR_19
zf-Vps39_C
zf-RING_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
114549053
NCBI-ProteinID:
XP_028424982
LinkDB
All DBs
Position
22:complement(18391006..18410467)
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AA seq
854 aa
AA seq
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MADVEEQGRKQSEEFTDESEEEDSEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHFGKVFLLDIQGNVTQKFEISSVKINQISLDESGEHVGICSEDGKVQVFGLYTREGFH
ENFDCPIKVVALHPQFTRSNYKQFVTGGNKLLLYERNWLNRWKTSVLHEGEGSITAIQWR
ANLIAWANNVGVKIYDIGTKQRITNVLRDNVSLRPDMYPCSLCWKDNSSLIVGWGSSIKI
CVVKERNPTEMRDLPSRYVEIVSAFETEFFISGLAPLADQLVTLYFVKENSDHMDEEFRA
RPRLDIIQPLPESCEEISSDALTVRNFQDNECRDYRLEHSEGESLFYIISPKDIVVAKER
DQDDHIDWLLEKKKYEEALMAAEISFKNIKRHDVQKIGMAYINHLVEKEDYDSAARKCQK
VLGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHDFLKTDYEGFATLI
REWPGELYNNMAIVQAVSDHLKRDPTNRTLLTTLAELYTYDQRYDRALEIYLRLRHKDVY
QLIHKHNLFSSIEDKIVLLMDFDKEKAVDMLLDNEDKLSTDRVVEELTDRPELLHVYLHK
LFKRDHHKGQKYHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEVCQQRNFVEETVFLL
SRMGNCRRALQMIMEELEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLQKMHRTQM
RGVRVDEENICESCHATILPSDMAKPFSVVVFHCRHMFHKECLPSSGTIPGVQFCNICSA
KKRGPGSGILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtggaggagcagggcagaaaacaaagcgaggaattcacagatgagtctgag
gaggaggacagcgaggaggagcccaagctgaagtatgagaggctctccaatggggtgacc
gaaatcctccagaaggatgcagccagctgtatgactgtccatgacaagtttcttgcccta
ggtactcattttgggaaggtcttcctgctggacatccaaggaaatgtaactcaaaaattt
gaaattagttcagtgaagatcaaccagatcagtctggatgaaagtggagagcatgtgggc
atttgctccgaggatgggaaggttcaagtgtttggtctctatacaagagagggcttccat
gagaactttgactgtcccatcaaagtggtggcattacaccctcagttcaccagatcaaac
tacaaacagtttgttactgggggcaacaagctgctcctgtatgaaagaaactggttgaat
cgctggaagacgtctgttctacatgaaggcgagggctcaatcactgcgattcagtggaga
gctaacctcattgcctgggccaacaatgtgggtgttaaaatctatgatattggtacaaaa
cagcggatcacaaacgtgctgcgggataatgtcagtctgaggcctgacatgtacccttgc
agcctgtgttggaaggacaacagctctctcattgttggctggggttcttccattaagatt
tgtgttgtgaaagaaagaaatcctactgaaatgagagatctgcccagccgttatgtggaa
atagtgtctgcatttgagaccgagttcttcatcagtggcctggccccgctggcagatcag
cttgtcaccctttactttgtgaaggagaactctgatcacatggatgaggagttccgtgcg
cggcctcgtctcgacatcatccagcctctccctgagagctgcgaggagatctcttcagac
gcgctgaccgtgcgcaacttccaagacaacgagtgcagagactaccgcctcgagcattct
gagggagagtcgctcttctacatcatcagtcccaaagacatcgtcgtggccaaggagcga
gaccaggatgaccatatcgattggctactcgaaaagaagaaatatgaggaggccctgatg
gctgcagagatcagtttcaaaaacatcaagagacacgacgttcagaaaattgggatggct
tacatcaatcacttagtggaaaaagaagactatgacagtgctgcgaggaagtgtcaaaag
gttcttggaaaaaacatggaactatgggaaaatgaagtgtacaggtttaagaccatcgga
cagttgaaggccatcagtcagtatttgcccagaggggatctgcgtctcagaccggccatt
tatgaaatgatcttgcatgactttctcaaaactgactatgagggttttgccacactgatc
cgggaatggcctggagagctttataataacatggccattgttcaggcagtcagcgatcac
ctgaagagggaccccaccaacagaaccttgctcaccacgttggctgaactgtacacgtac
gaccagcggtacgacagagctttagaaatctatctgaggctgaggcacaaagatgtttac
cagctgatccacaaacacaaccttttctcctccatagaggacaagatcgtcctcctcatg
gactttgacaaggagaaagctgtcgacatgcttctggacaatgaagacaagctatcaaca
gacagggtggtggaagaactaacagacaggcctgagcttctgcatgtgtacctccataaa
ctgttcaagcgggaccaccacaaaggccaaaaatatcacgagagacagattggtctgtat
gccgagtatgaccggccaaatctcttacctttcctgagagatagcacacactgcccactt
gaaaaggctctcgaggtttgtcagcagaggaactttgtagaggagactgtcttcctgctc
agcaggatggggaactgcagacgagcgctgcagatgatcatggaggagctggaggacgtg
gacaaggccatagagtttgccaaagagcaggatgatgcagagctctgggaggatctcatc
tcttactccattgacaaaccaccattcatcaccggcctcctgaataacattggtactcat
gtggatcccattctgctcatccatcgcattaaggagggcatggagatcccaaacctcaga
gattcactagtgaaaatcctccaggactacaatctgcagattcttctgagggaaggatgt
aagaagatcctggtggccgactccctctctctgctccagaagatgcaccgaacacagatg
agaggagtccgggtcgacgaggagaacatttgcgaatcgtgtcatgctacaatattacca
tcagacatggccaaacccttcagtgtggtggtgtttcactgcagacacatgtttcacaag
gaatgtttaccatcttcaggaacaattcctggggtgcagttttgtaacatctgcagtgcg
aagaagcgtgggccaggaagtggaatcctggagatgaagaagtaa
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