Perca flavescens (yellow perch): 114549066
Help
Entry
114549066 CDS
T07494
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pflv04040
]
114549066 (trpc1)
Ion channels [BR:
pflv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114549066 (trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
114549066
NCBI-ProteinID:
XP_028425010
LinkDB
All DBs
Position
22:16687900..16702253
Genome browser
AA seq
796 aa
AA seq
DB search
MHISVWPYSLSVVMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNLNCVDVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLRELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDHLDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFSFLLLLNLYSLVYNEGKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLDESRNQLSFVMNSLYLATFALKIVAHSKFKN
VADTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDHKDPDKYKPKDCEGIFCQRQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTMPPPFNILPSPKTVCYLVTSMSKWICSHTSKGKVKRQNSL
KEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtttggccgtactcgctctccgtcgtaatggcagctctgtaccagggc
acggacgcttcctctccggataaatttctggccttgaaagacgtgagagaagtgaaagag
gaaactacgctggatgagaagctcttcctgctggcatgcgagaaaggtgactactacatg
gtgaagaaactgctcgaggagaaccgacacggcgagctcaacctcaactgcgtagatgtg
ctgggccgggatgccgtcaccatcaccatcgagaacgagaacctagacattctgcagctt
cttctggaacatggctgccaggcgacagatgccttgttggtggccatagactctgaggtg
gtgggagctgtggacatcctcctcaaccacagaccgaggcgatcctccaagccctccatt
gctaaactgatgcagcggattcagaacccagagtattctaccaccatggacgtggctcca
gtcatcctggcagcccacagaaataactacgagatcctgactatgctgctgaaacaggac
atctcgcttccccggccccatgctgtaggctgcgagtgcacactctgcaacgctaaaaac
aagaaggacagcctacgacactcccggttccgcctggacatctaccgctgcctggccagc
ccctccctgatcatgctgactgaggaagatcccatcctcagggcctttgagctgagtgca
gacctcagggagctcagcctggttgaggtggagtttaggaatgattatgaggagctggcg
aagcagtgtaagatgtttgccaaggacctgctggctcaggctcgaaattctcgagagcta
gaagtgattcttaaccacacatccaatgaggatcaccttgacaagagaggcttactggag
gagcgaatgaacctcagtcgactcaagcttgctatcaagtacaaccaaaaagagtttgtg
gctcagtccaactgtcaacagttcctcaacaccgtctggtttggagagactgccagctac
cggcgcaaacacacctgtctaaagatggccacggtgctgagcgtggcgatgctttggccg
ctgctctctgtctgctaccttctggtgccacgctcccgtgtgggccagatcatccacaca
cccttcgtcaagttcatcatccacagcgcctcctacttctccttcctgctgctgctcaac
ctgtactctctggtctacaatgagggcaagaaaaacaccatgggccctgcgctggagatg
atagattacctgctcatcctctggatcataggtatggtgtggtcggatgtgaagcgtctg
tggtacgaagggctggaagactttctggatgagtcaaggaaccagctgagtttcgtgatg
aattccctttacctagccacctttgccctcaagatagttgctcacagcaagttcaagaat
gtggcggacacagagaggaagaactgggatgccttccatcccatcttggtggctgagggc
ctgtttgcctttgccaacgttctaagttacctgcgactcttcttcatgtacaccaccagc
tccatccttgggccgctacagatctccatgggtcagatgctgcaggagtttggaaagttt
ttgggcctcttcctgttggtgttattctccttcaccattggactcacccagctttatggg
aaggaccacaaagacccagacaagtataagccaaaggactgcgagggaatattctgccag
cgacagagcaatgatgcattccacacgtttatggggacctgctatgccctattctggtac
atcttctccctggcacacgttgcgctcttcgtcacccgcatcagctacacagaggagctg
cgctcttttgtgggcgccatgatcataggcacctacaacattgtggtggttattgtgctg
accaagctgctggtagccatgctccataaaagcttcagacaaattgctaatcacgaggat
aaggagtggaaatttgctcgggccaaactgtggctaagctactttgatgacaagtgtacc
atgcctccaccgtttaatatcctcccatccccaaagactgtctgctacctggtgaccagc
atgagcaagtggatctgttcgcacacttcaaagggcaaggtgaagagacagaacagcctc
aaggagtggaagaacctgaagcagaagcgtgatgagaactatcagaagatcatgtgttgt
ctggttcatcgctacttgacctccacgcggcagaagatgcagagcacagaccaggccacc
gtggaaaatctgaatgacctgcgccaagacctctccaagtttcgcaacgagatgagggac
ctgctgggcttccggacctccaaatatgccatgttctacccaaggagctaa
DBGET
integrated database retrieval system
