Perca flavescens (yellow perch): 114549242
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Entry
114549242 CDS
T07494
Name
(RefSeq) double-stranded RNA-specific editase B2-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflv03041
]
114549242
Spliceosome [BR:
pflv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114549242
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
114549242
NCBI-ProteinID:
XP_028425277
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Position
22:7348031..7648120
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AA seq
758 aa
AA seq
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MFLCDCLWTLLVCRPILRCDAWGTLLHFTPEKVSMLSALIAPFKYISPGTSSTEDEDSLS
TSSAEVKENRNIGNLEDRSIGSAECQSLFCSDSARSGSSGLKRKRPLEEENNGHLCHLRL
IYKKLSWSEAPKNALVQLNELRPGLQYRMVSQTGPVHAPVFSIAVEVNGLTFEGTGPTKK
KAKMRAAELALKSFVQFPNAPQAHLAMGNISNPSADFTSDQADFPDTLFKEFESSPCSDG
LSLCNAAAESELLSSELLRHGRLLRHTLDLMVQAQQRLGGIVPEPEAAKSPVALLNELRP
GLRYACLSERAEGRRLRSFVMAVRVDGQIFEGCGRSKKLAKTQAAQCALQALFNIRTAPE
GRTGLKASRKSCPHLPQDFADSIFHLVREKYRSLVGSCSPAHARHKSLAGIVMTRGLDLR
HAQVVALSTGTKCINGEYLSDQGQVVNDCHAEITVRRALLRFLYSQLELFLSKRPEDWEE
SIFVRHKECGYMLRDNVHFHMYISTSPCGDGRLNSPYEITTDLHSSRHLMRKHRSHLRTK
IESGEGTVPVRCRGPVQTWDGVLQGEQLITMSCTDKITRWNILGLQGALLSHFVEPVYLH
SVTVGSLRHTGHLGRVLNQRQERLGPLPATHRRNQPLLSGLSSAEYQQPGKASCVSVNWT
LGDSQLEVVNTATGQRRDSGTPSRLCKRALFTRWNRLYRKSGIHVSGSVERQLMYCEAKM
AARSYQTVKQQWFRSLQEMGLGTWVKKPPEQEQFLLSD
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgttcctctgtgattgcttatggactctcctggtgtgtaggcctattctccgctgcgat
gcctgggggacactgcttcacttcaccccagagaaagtcagtatgctgtcagcattgatc
gctcccttcaagtatataagccctgggaccagcagcacagaggacgaggacagtttaagt
accagcagtgctgaggtaaaggaaaaccgtaacattggcaacttagaggatcgctccata
gggtctgcggagtgccagtcgcttttctgctccgactctgcgagaagtggcagctcaggt
ttgaagaggaaaaggccgctagaggaggaaaacaacggccacttgtgtcatctccgcctg
atctataagaaactgtcctggtctgaagcaccgaagaacgctttggtgcagctgaatgag
ctcaggccgggcctgcagtaccgcatggtgtctcagacgggccctgtccacgctccggtc
ttctccatcgctgtggaggtgaacgggctgaccttcgagggcacgggccccacaaagaag
aaagcgaagatgagggctgccgagctggcgctcaagtccttcgtccagttccccaacgct
cctcaggcccacctggccatgggaaacatctcaaacccttctgctgacttcacctcggat
caggcggacttccctgacacgctcttcaaggaatttgagtcttcgccgtgctccgatggc
ctctcgctctgcaacgcggcggcagagagcgagctactgtcaagtgagctgctgagacat
ggacggttgcttcgccataccttggacctgatggtgcaggctcagcagaggctaggtggg
attgttccggagccagaggctgccaagagccctgtggcgttgctcaatgagctccggccg
ggtcttcgctatgcctgcctctcggagcgagctgaaggccggcggctgcgtagcttcgtg
atggcggtgcgcgtggacgggcagatatttgagggctgcggtcgcagcaagaagttggcc
aagacccaggcggcccagtgtgctcttcaggccctcttcaacatcaggacagcccccgag
gggaggacaggcctcaaagccagcaggaagagctgtcctcatttaccccaggactttgcc
gattcaatattccacttggtgagagagaagtaccggtcgctggtgggcagctgcagtcca
gcgcacgctcgacacaaatccctggcaggcatcgtaatgacccgaggcctggacctgagg
cacgcccaggtggtggcgttatccacgggcaccaagtgtatcaacggggagtatctgagt
gaccagggacaagtggtcaatgactgtcacgctgaaatcacggtccgcagagccctgcta
cgcttcctctactctcaacttgaactcttcttgagtaaaaggccagaggactgggaggag
tcgatatttgtacggcacaaggagtgcggctacatgttgagagacaacgtccatttccac
atgtacatcagcacgtcgccgtgtggggacgggaggctcaactcgccctatgaaatcacc
actgacttgcacagcagcagacacctcatgagaaagcaccgcagccacctgcggaccaaa
atcgagtcaggcgaggggacggtgccggtgcgatgtcgggggcccgtccagacgtgggac
ggtgtcttacagggcgagcagctcatcaccatgtcctgcaccgacaagatcaccagatgg
aacatccttggcctgcagggggcgttgttgagccactttgtggagccggtgtacctgcac
agcgtgaccgtcggcagcctgcgccacacgggccatctgggccgggttctgaaccagcgg
caggagcgcctgggcccactgcccgccacgcacagacgcaaccagcccctgctcagcggg
ctgagcagtgccgagtatcagcagcctgggaaggcatcatgtgtgagtgtcaactggacg
ctgggtgattcacagttggaggtggtcaacacagccaccggacagagacgggactcaggg
acaccctcgcggctctgcaagcgcgccctgttcacacgctggaacagactttaccgcaag
tcggggatccacgtgtctggctcggtggaacgccagctcatgtactgcgaggccaagatg
gcggcacgttcttaccagacagtgaagcaacagtggttcagatctctgcaggaaatgggc
ctcgggacctgggtcaagaaaccgcccgagcaggaacagttcctgctgtcggactga
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