Perca flavescens (yellow perch): 114549430
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Entry
114549430 CDS
T07494
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114549430 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pflv01002
]
114549430 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pflv00536
]
114549430 (shh)
Peptidases and inhibitors [BR:
pflv01002
]
Cysteine peptidases
Family C46: hedgehog family
114549430 (shh)
Glycosaminoglycan binding proteins [BR:
pflv00536
]
Heparan sulfate / Heparin
Morphogens
114549430 (shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
Vint
Ribosomal_S6e
DUF7764
PT-HINT
Motif
Other DBs
NCBI-GeneID:
114549430
NCBI-ProteinID:
XP_028425532
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All DBs
Position
22:complement(17176679..17183902)
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AA seq
413 aa
AA seq
DB search
MLLWTRIVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVHYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTKKAVKHLQTGDRVLAADDDGNPIYTDFIM
FIDQDSTTRRLFYVIETDSGQKITLTAAHLLFVGHNTTEEERMSAIFASQVQSGQKVFVL
YAERSRLEPVTVKRIYTEEHEGSFAPVTVQGTVVVDQILASCYAVIDDHDLAHWALAPIR
LAHWVSSWLFRSQPQVSAQNDGVHWYSKILYQLGTWLLDSHSIHPLGMSVYPS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatcgtattggtcggtctcatctgcttgtccttggtgtcatct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaaactgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aatactgacatcatattcaaggacgaggagaacaccggtgccgacaggctaatgactcag
agatgtaaagacaagttgaactctctggccatctcagtgatgaatcagtggcctggtgtg
aagctgcgggtcacagaaggatgggatgaagacggacaccacttcgaggagtcgctccac
tacgagggcagggccgtggacatcaccacctcggacagagacaagagcaaatacggcact
ctgtccaggctggcggtggaagccggattcgactgggtccattatgaatccaaagcccac
attcactgctctgtgaaagcagaaaactcagtggcagcaaagtcaggcggctgcttccca
ggctcctccactgtcacccttcaggatggaaccaagaaggcggtcaaacacctccaaacc
ggcgacagagtcctggcagcagatgacgatggaaacccgatttacaccgacttcatcatg
ttcatagaccaagactcgactaccaggaggctcttctacgtgatcgaaaccgactcgggc
cagaaaatcaccctcaccgccgcgcacctcctcttcgtcggccacaacaccacggaagag
gagcggatgtctgcgatcttcgccagccaagtccaatctggacaaaaggtgttcgtgtta
tatgctgagcgaagtcgactcgagcctgtgaccgtaaaacggatttacacggaagagcac
gagggctcttttgcgccagtgaccgtgcaggggacagtcgtggtggaccagatccttgcg
tcctgttacgcagtgatcgatgaccacgatctggcgcactgggccctggcacccatcagg
ctcgcccactgggtgtcatcgtggcttttccgttcccagcctcaagtcagtgcacagaac
gacggagtgcactggtactccaagatcctctatcaattaggaacatggctcttggacagc
cactcgatccatccacttgggatgtcagtttatccaagttga
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