Perca flavescens (yellow perch): 114549572
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Entry
114549572 CDS
T07494
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114549572 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114549572 (arfgef1)
Membrane trafficking [BR:
pflv04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
114549572 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
114549572
NCBI-ProteinID:
XP_028425745
LinkDB
All DBs
Position
22:14653168..14709874
Genome browser
AA seq
1953 aa
AA seq
DB search
MFEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPSGDGKS
GSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDST
APGKKLIDRIIETICACFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKLSWSLASRKRDRQLQEAKQLER
ERHRQHSPVTQQSEPDSPQLQAHIHPPAKSLSQEANGPVTPPTPSITIPSSPSTPSTPAP
EGSSRSVSGEQEEQREQEEQGEQGPVYESPDPENGSDFCVAENEQTEADQATAAAQTAAQ
QHPEAGEQEDEGTPNYEEKAQEIVHSILQEVVNTVAGAHCLDPTNLCSDTKESGGDGEPA
ESEPTEAPTEGTQSSLEDEGTLGSDSEHVHANGIPGTPISASFTPSLPDDRLSLSSNDTQ
ESGAAPGQPPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLL
SILQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFKTHLKM
QIEVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFER
LVNDLSKIAQGRGGHELGTTTLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLG
QEKPSEQESTETKAPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEI
IEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKE
VMYAYVDQMDFQGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASA
DTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKK
IAMKETKEITMKSNKHSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLE
HVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRFAIRIACIFCIQLERDAYVQAL
ARFTLLTASSGISEMKQKNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQLIGTG
VKARYISGTVRSKDGFITTTKEQSNDEYLGLVGGTVDRKQIASIQESIGETSSQSVVVAV
DRIFTGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWS
RIWEVIGDHFNKVGCNTNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMK
KNRSPTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDHDESIVELAFQTTGHIV
TNVFEKHFAATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSERPQAFKDYT
SDDMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQ
DLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLNDVLLDDILAQL
YWCVQQDNEQLARSGTNCLENVVILNGEKFSLETWDKTCNCMLDIFKTTIPHALLTWRPA
GAEGENMTTQSLSDKQLDCISQKSVDIQSRSDDQHSISSADRVAMESRRQSQYSSASGMC
EDGSRSRTPIKVQEQRLFTALLIKCVVQLELIQTIDNIVFFPATSRKEDAENFAAAQRDA
SYAADVPVEAQDQGMYRYLTSEQLFKLLDCLLESHGFAKAFNSNNEQRTLLWKAGFKGKS
KPNLLKQETSSLACGLRILFRMYTDESRQDAWEEVQRRLLDVCSEAVAYFLALTSESHRE
AWTNLLLLFLTKVLKISDERFKAHASRYYPLLCEIMQFDLIPELRAVLRKFYLRIGLVFN
IAQLPEPAPEPRPAHVEREADTEVGVEAGEEAQ
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagggcaaaaagacgaaaaacatgttccttacacgagctttggaaaagatcctg
gccgacaaggaggtgaaaaaggctcaccattcacaattgcgcaaagcctgcgaggtggca
cttgaggaaatcaaagaggaatcagaaaaattaagtccgcccagtggagacggcaaatcg
ggttccagcactttaccgccaatcaaatcaaagaccaacttcattgaagccgacaagtac
ttcttgccgtttgagctggcatgtcagtccaaatgtccccgcatcgtcatcacctcgctc
gactgtttacagaagctgatagcgtatggccacctgacgggcagcgccccggacagcacg
gctccgggcaagaagctcatcgaccggatcatcgagaccatctgcgcctgtttccaaggg
ccgcagactgatgagggcgtgcaactacagattattaaggctctgttaacagctgtgacc
tcccagcacatagaaatccacgagggcactgtgctgcaggctgtccgcacgtgttacaac
atctacctggccagcaagaacctcatcaaccagaccacagccaaggccacgctcacacag
atgctcaatgtcatcttcgcgcgcatggagaatcaagcacttacaaatcacaagctatct
tggtctctggcctccagaaagcgtgaccgccagctgcaggaagcaaagcagctggagaga
gagcggcaccggcagcactccccggttacccagcaaagtgagccagactccccccagctc
caagctcacatccacccgccggccaagagtctgtcccaggaggccaacgggcccgtcact
cctccaactcccagcatcaccatcccatccagcccgtccaccccctcaacacccgcccca
gaaggcagcagcaggtctgtgtctggggagcaggaggagcagagggagcaagaagagcag
ggagagcaggggcccgtctacgagagcccagatccagaaaatggttctgatttctgtgtg
gctgaaaatgaacagactgaggcagatcaagccaccgcagcagcacagacagcagcccag
cagcatccagaggcaggtgagcaggaggacgaggggaccccaaactatgaggagaaagct
caggaaatcgtccatagtattctgcaggaggtggtcaatactgttgcaggagcgcactgc
ttggaccccacaaacctctgctctgacaccaaggagtccggcggcgatggcgagccagca
gagtcggagccgactgaagcgccgacagagggcacccagagctccctcgaggacgagggc
accctgggtagcgacagcgagcacgtccatgccaacggcattcccggcacgcctatttct
gccagcttcaccccctcgctgcctgatgacagactgtctctctcgtccaatgacactcag
gagtcaggagcagcgccgggccagccgccaggtgcaaagttctcccacatcctccagaaa
gatgcctttctagtctttcgctcactctgcaagctgtcaatgaaaccgctgtcagatgga
ccacctgatcccaagtcccatgagctgcgttcgaaggtcttgtccctccagctgctccta
tccatcctgcagaacgccgggcccatcttcaagaccaacgagatgttcatcaatgccatc
aagcagtacctgtgtgtggccctgtccaagaatggtgtctcctccgtgcctgaggtcttc
gaactctcactctccattttcctcactctgctctcccacttcaagacgcacctcaagatg
caaatcgaggtgttcttcaaggagattttcctgtacattcttgagacgtccacaagctcc
tacgaccacaagtggatggtcatacaaaccctcactagaatatgcgcagatgcccagagt
gtggtggacatctacgtgaactatgattgtgacttgaatgctgctaacatatttgagcgg
ttggtcaatgacctctcgaaaattgcgcagggtcgcggaggccatgagcttggcacaaca
accctacaggagctgaccctgagaaagaaaggccttgaatgtctagtgtccatcctgaaa
tgtatggtagaatggagtaaagaccaatacgtcaaccccaactcccagaccagccttggc
caagagaaaccatcagaacaggagagcacagagaccaaggccccggagactataaaccgc
tatgggagcattaactctctggactccacagcctcgtctggcatcggcagctacagcacc
cagatgtccggtactgacaaccctgagcagtttgaggtcctcaaacagcaaaaggagatc
atcgagcaaggcattgacctgttcaacaagaaaccaaagagaggaatccagtaccttcaa
gagcaaggcatgctgggtacaaccccagaggatcttgctcagttcttgcaccaagaagag
aggcttgattcgactcaagtgggagaattcctcggggataatgaccgtttcaataaagag
gtgatgtacgcctacgtggatcaaatggacttccagggcaaagactttgtttctgcacta
aggatgttcctggagggctttcggctccccggagaggcccagaagattgaccggctcatg
gagaaatttgcagcgagatatcttgaatgcaatcaggggcaaaccctctttgccagtgct
gacacagcatacgtccttgcctactcgatcattatgttgacaacagaccttcacagtcca
caggtgaagaataaaatgacaaaagagcaatacatcaagatgaaccgcggcatcaacgac
agcaaagacctacctgaggaatatctctcagccatctacgacgagattgcggggaaaaag
attgccatgaaggagacgaaagagatcaccatgaaatccaacaagcacagtgtggctagc
gagaagcagaggcgtctgctgtacaacgtggagatggagcagatggccaagacggccaaa
gctctgatggaggccgtcagccacgtgcaggctcccttcaccagcgccacacatctggag
cacgtcaggcccatgttcaagcttgcatggacaccgttcctggcagctttcagcgtgggt
ctacaggactgcgatgacaccgaggtggcctcactgtgtctggaaggcatccgttttgcc
atcaggatagcatgcatcttctgcatacagttggagagggatgcgtatgtgcaggccctg
gcgaggttcaccctgctgacagccagctctggcatctcagaaatgaagcagaagaacatt
gacaccatcaagaccctcatcactgtggcccacaccgatggcaactacctgggcaactcc
tggcacgagatcatgaagtgcatcagtcagctggagctggctcagctgatcggtacaggg
gttaaggcacgctacatctcagggacggtgcgcagcaaagatggattcattacaactacg
aaggagcagagcaacgatgagtacctgggtctagttggagggacagtggaccgtaagcag
atcgccagcattcaggagtccatcggagagaccagctctcagagtgtggtggtggctgtg
gacaggatattcaccggttctaccagactggatggtaacgcaatagttgattttgtgcgc
tggctgtgtgctgtgtccatggatgagctggcctcgcccacacacccacgcatgttcagc
ttgcaaaaaatagttgagatctcctactacaacatgggtcgcatcaggctgcagtggtcc
aggatctgggaggttatcggagaccacttcaacaaggttggctgtaataccaatgaagat
gtggcaattttcgcagtggactctctcaggcaattgtccatgaaatttttggagaagggg
gagctggcaaacttcagattccagaaagactttctgaggccgtttgagcacatcatgaaa
aagaacaggtctcccaccatcagagacatggtggtgcgctgtatagcccagatggttaac
tcccaggcggcaaacattcgctctggctggaagaacatcttctctgtcttccacctggct
gcttctgaccatgacgagagcattgtagagctggccttccagaccaccggccatatcgtc
acgaatgtatttgaaaagcactttgcagccaccatcgactccttccaggacgctgtcaag
tgtctgtcagagtttgcctgtaatgcctccttcccggacaccagcatggaagccatccgc
ctcatccgacactgcgccaaatacgtctcagagaggccacaggccttcaaagactacacc
agtgatgacatgaatgtagcgcctgaggaccgcgtgtgggtgcgggggtggttccccatt
ctcttcgagctctcctgcatcatcaacaggtgtaagctggatgtcaggaccagagggctg
actgtgatgtttgaagtgatgaagacctacgggcacacctttgagaaacactggtggcaa
gatctgttcagaattgtcttcaggatctttgacaacatgaagctgcctgagcaacagact
gagaaagcagagtggatgaccaccacctgcaaccacgcactttatgccatctgtgatgtc
ttcactcaatactttgagtccctcaatgacgtcctgctggatgacattctggctcagctc
tactggtgtgtgcagcaagataatgagcagctcgcccgttcaggcaccaactgtctagag
aatgtggtcatcctgaatggagagaaattctcccttgaaacctgggacaagacctgtaac
tgcatgctggacatcttcaagaccaccatcccacacgcgctgttaacatggagaccagca
ggagcagagggagaaaacatgacaacacagagtctgtcagacaaacagctggactgcatt
tcccaaaagtcagtggatattcagtcccgctcggacgaccagcattccatcagcagtgct
gatagggttgccatggagagtcgtcggcagagtcagtacagctcagcctcaggcatgtgt
gaggacggctccaggagcaggacccctataaaggtccaggagcagcgcttattcacagct
ttgctgataaagtgtgtcgtgcagctggagctgatccagacgattgataacatcgtgttt
tttcctgccaccagtaggaaggaagatgctgagaactttgccgctgctcagcgggatgcc
tcgtatgcagctgacgtcccagtggaggcccaggaccagggcatgtatcgctacctgacc
tcagaacagctcttcaagctgctggactgcctgctggagtcgcatggcttcgccaaggct
ttcaactccaacaacgagcagaggaccttactgtggaaagcaggtttcaaaggaaagtcg
aagcccaacctgttgaagcaggagaccagcagcctggcgtgtggcctgcgcatcctgttt
cgtatgtacacggacgagagtcggcaggacgcctgggaggaggtccagagacgactactc
gatgtgtgcagtgaggctgtagcatacttcttggctctgacctcagaaagccacagggag
gcctggaccaacctgctgctgctcttcctcaccaaggtgctaaagatcagtgatgaaagg
ttcaaggcgcatgcgtccagatactaccctctgctgtgtgagatcatgcagttcgacctg
atccccgagctacgggctgttctgagaaagttttacctgcgcatcggcctcgtgtttaac
atcgcacagctgcctgagcccgcacctgaacctcggccggcacacgttgaacgggaggca
gacacagaggtgggggtggaggccggggaggaggcccagtga
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integrated database retrieval system