Perca flavescens (yellow perch): 114549974
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Entry
114549974 CDS
T07494
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04510
Focal adhesion
pflv04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114549974
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114549974
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
CdiA_C_tRNase
Motif
Other DBs
NCBI-GeneID:
114549974
NCBI-ProteinID:
XP_028426150
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All DBs
Position
23:6604742..6633133
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AA seq
1780 aa
AA seq
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MSLIIHFVTALALWWPVGALMPELGDVCTKGSCYPATGDLLIGRAHRLSASSTCGLKRPE
RFCIVGHLEDEKKCFVCDSRKPFNEDNNQGSHAIENLVTTFAHNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFRTFRPAAMLIERSMDFGKTWQVYRYFAYDCESSFPGVPSRPM
VKVDEVVCDSHYSDIEPSTEGEVIFRALDPVFKIEDPYSLRIQNMLKITNLRVKFTKLHT
LGDNLLDSRDDVIEKYYYSLYDMVVRGNCFCYGHASECAPMDGATFDAEGMVHGRCACNH
NTEGLNCERCQDFYHDLPWRPAEGQNTHACKKCECNHHSTSCHFDLAVYMTTGNISGGVC
DDCQYNTVGRQCEQCAPFYFQHPNRDLRDPNVCEPCNCDPSGSLQGGLCDSHTDVAAGMI
SGQCRCKANVEGERCDHCRQGHHGLGQGPHGCLSCTCNPLGTLPGGNPCDSNTGRCFCKR
LVNGHNCDQCLPQHWGLSNDMDGCRSCDCDQGGAVNNNCEPHTGQCVCRERMFGRRCDQV
ESGFYFIALDHYTYEAEDAEHGPGVTVVPRPYPLDRSPTWTGMGFVNVPEGAYLEFTINN
IPESMDYDILIRYEPQLPDQWEQVNIRVQRPIFNPPNYSSHCGNSIQSGDEQSISLPPGS
RHVLLVRPVCFEQGLNYTIRLTLPLYSSVSDVQSPYTLIDSLVLIPRVRELDMFHGIDGD
GAWDTFQRYRCLESSQSVVKSPLTDICNDYIFSVSALLHKGAMACQCDPQGSLSAVCEPS
GGQCRCRSNVVGRNCDHCAPATFLFSPNGCRPCDCDPRGAISAFCHEATGQCECVPGATG
RQCSHCLPGFWGFPQCRPCQCNGHSEYCHPQTGECQGCRDFTTGHHCERCLDSYHGNPEL
GSGSHCRPCMCPDGPRSGRQFSDSCYLVANSNQLVCVCSPGYKGARCDECAPGYFGNPLV
PGGRCMPCQCNSNIDMHDPGSCDARTGACLKCLYHTEGYGCQHCKQGYYGNAGTQSCRKC
MCYSAGTSPQACSSPDECQCNQHSGQCPCQPNVVGQNCDRCAVDTWNIASGTGCQRCNCH
PVHSSGSSCDEVTGQCLCKPGFGGKTCRECRELFWGDPEVKCHACDCDSRGISSNQCHRA
TGQCTCVKGVSGRRCDECARGYVGEFPTCEPCHQCFAVWDTVVGELTNQTQRLEAQVTQL
QTSGVTAPYKELVGSLERNAKAVREIVENNPAAVKLEKIQDLMHQITGVMSYLNGKLNTT
EETLNVLHSDANATDANLEALTAEANQLELSVQDLRQQVHKAKNANIQGAMDTIAAAHMQ
STTAELRANTSTSNPGNTVERSATVRKATEDKLSSAQKEFDRKHQRNSQKLDKLSTELDK
FDLSPLSKKTCGGAAEGDGCPGSPCGGLGCVGEDGAPQCGGEGCGGLVTTSQTALKSAKD
LDQEILKAMQEVDKLSRMVWEATNRANEAKANALEVLIKSNRSKERVEQSNEQLRNLIKE
IRDLLTNEKADVSVIEAVANEVLALEMPTSTEKLKELTKEIREKVGTLTSVETILSQSAD
DIRAAETLLKRAKAASEEASNMKETADVVRAVLVETERAQSMAMDAIQLAQNNTNGTLDL
LISVESETAMSELKLGNTTGRLVQLEREVGLLRQNNLEVDRLAKMADWTTDQARLNAEEA
QQEFDTEVKDKMVEVEDLVEDKGESVLQARRRADILQQEAKELLAQSSIKLKELGELESS
YEANQFILEAKAAELAELERTARRLLEEISHKVTLYSTCL
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcataatccactttgtaacagctttggccctgtggtggcccgtcggggcgctg
atgccagagctcggggatgtttgcaccaaaggcagctgctaccccgccacaggtgacctg
ctgatcggccgagcgcacaggctcagcgcctcctccacctgcggcctcaagcggccggag
cgcttctgcatcgtcggacatctggaggacgagaagaaatgttttgtgtgcgactccagg
aagccgttcaacgaggacaacaaccaaggcagccacgccatcgagaacctggtcaccacc
ttcgcccacaaccgcctcaagacctggtggcagtcggagaacggtgtggagaatgtgacc
atccagctggacctggaggccgagtttcacttcacacaccttatcatgaccttcaggacg
tttcggcctgctgccatgttgatcgagcggtccatggactttgggaaaacgtggcaggtt
tatcgttactttgcctacgactgcgagtcatccttccccggcgtgccctccaggccgatg
gtcaaagtggacgaggttgtctgcgactcccattactcagacatcgaaccatccacagag
ggagaagtgatatttcgggcgctggaccccgtctttaagattgaggacccctacagcctg
aggatacagaacatgctgaagatcactaatctccgggtgaagttcaccaagctccacacg
ttgggcgacaacctgctcgactcccgcgacgacgtgatagagaagtactattactccctc
tatgacatggtcgtccgcggcaactgcttctgctacggtcacgcctcggagtgcgccccc
atggatggtgcaacgtttgatgctgagggcatggtccatggccgctgtgcatgcaatcac
aacacagagggattaaactgtgagcgctgtcaagacttttaccatgatctgccttggaga
cctgcagagggacaaaacacccacgcctgcaagaagtgcgagtgtaaccatcactccaca
tcgtgtcacttcgacctggccgtgtacatgacgaccggcaacattagcggaggcgtgtgc
gacgactgtcaatacaacacggtgggccgacagtgcgagcagtgtgcacccttctacttc
cagcacccaaaccgagacctgagggaccccaacgtctgtgagccgtgtaactgtgacccc
tccgggtctctgcagggcggactgtgtgactcgcacaccgatgtggccgccgggatgatc
tcaggccagtgtcgctgcaaagccaatgtggagggcgagcgctgcgaccactgcagacag
ggacaccacggactgggacaggggcctcacggctgcctctcttgtacctgtaacccgctg
ggaactctgcctggaggaaacccctgtgattcaaacacagggaggtgcttctgcaaacgc
ctcgtcaacggacataactgcgatcagtgtctgccgcagcactggggtctgtccaatgac
atggatggctgcagatcatgtgactgcgaccagggtggggctgtaaacaataactgtgag
cctcacacaggacagtgtgtgtgcagggagcgcatgtttggacgacgctgcgatcaagtc
gagtccggcttctacttcatcgctctggatcactacacctacgaggcagaggacgccgag
catggacctggtgtgacggtggtaccgaggccttaccctctggatcgcagtccgacatgg
accggtatgggttttgtcaatgtgccagaaggagcttacttagagttcaccattaacaac
atcccagagtccatggactatgacatccttattcgctatgagccgcagctgccagaccag
tgggagcaggtgaacatccgagtgcagcgtcccatcttcaaccctccaaactactcctct
cactgcggcaactccatccagagtggagacgagcagtccatctctcttccacctggatcc
agacacgtgttgctggtgaggccggtgtgtttcgagcaaggactgaactacacgatccgt
ctcactctgcctctctactcgtcagtcagcgacgtccagagcccgtacacactcatcgac
tccttggtgctgataccccgggtcagggagctggacatgttccacgggatcgatggtgac
ggagcgtgggatacatttcagcgctaccggtgtctggagagtagccagagcgtcgtcaaa
agccccctgaccgacatctgtaacgactatatattcagcgtctctgctctgctccacaaa
ggagccatggcatgccagtgtgaccctcagggttcactaagcgctgtgtgtgagcccagt
ggaggtcagtgccggtgtcgatccaatgtggtcggcaggaactgcgaccactgtgccccg
gctacgtttctcttcagccccaacggctgcaggccttgcgactgtgaccctcggggtgcg
atcagcgccttctgccacgaggcgacaggccagtgtgagtgtgtccctggggccacaggg
cgccagtgttcccactgcctgcccggcttctggggcttcccccagtgcagaccgtgccag
tgtaacggccacagcgagtactgccaccctcagactggagagtgtcaaggctgcagagac
tttaccactgggcaccactgtgagaggtgtttggacagttaccatggcaacccagagttg
ggttcaggtagccactgccgcccctgtatgtgccccgatggaccgcgcagtggacggcag
ttttctgacagctgttaccttgtggctaatagtaaccagctggtgtgtgtgtgcagccct
ggctacaaaggtgccaggtgtgacgagtgtgctcccggttacttcgggaaccctctggtg
cccggtgggcgctgcatgccctgccagtgtaacagcaacatcgacatgcacgacccgggg
tcctgtgacgctcggacgggcgcctgtctcaaatgcctgtaccacaccgagggctacggg
tgtcagcactgcaaacagggttactacggcaacgctggcactcagagctgcaggaagtgt
atgtgttactcggcgggcacatcacctcaggcctgttcctcccctgatgagtgtcagtgt
aatcagcacagcggtcagtgtccctgccagccaaacgtggtcggtcagaactgcgaccgc
tgtgccgttgatacgtggaacatcgccagcgggacgggctgccagcgctgcaactgccac
cccgtccactcgtctggatcctcctgcgatgaggtcacaggacagtgcttgtgcaaaccc
ggttttggtggcaagacttgtcgggagtgccgagagctcttctggggggatccagaggtc
aaatgtcatgcttgtgactgcgactctcggggaatctccagcaatcagtgccatcgtgcg
acaggtcagtgcacctgtgtgaagggcgtgtccggccggcgctgtgacgagtgcgccaga
ggctacgtgggcgagttccccacctgtgaaccctgccaccagtgctttgctgtctgggac
accgtggtgggcgagctgaccaatcaaacccaacgtctggaggcccaggtaacacagctg
cagaccagcggggtgacagcgccgtataaagagctggtcggcagcctggagagaaacgcc
aaagctgtccgagaaatagtagagaacaaccccgctgcagtgaagctggagaagattcag
gacctgatgcatcagattaccggtgtgatgtcctacctaaacggaaagctgaacacgaca
gaggagacattgaacgttctccacagtgacgccaacgctaccgatgcaaacttggaagca
ctgactgccgaggccaaccagctggagctgagtgtccaggacctgagacagcaggttcac
aaagcaaagaacgccaacatccagggtgccatggacaccattgcagctgcacatatgcag
tctacgacggcagagctccgcgccaacacctccaccagtaatcctggaaacacagtggag
aggtcggccacagtacggaaagccacggaggacaaactgagcagcgctcagaaggagttt
gaccgcaagcaccaaagaaactcgcagaagctggacaaactgtccactgagctggataaa
tttgacctgtcaccacttagcaagaagacatgtgggggtgcagctgaaggggacggctgc
cctggctccccctgcggtggtttgggttgtgtcggcgaggacggagcgcctcagtgtggc
ggagaaggatgcggaggcctcgtcacgacctcccaaactgctctcaaatcagccaaagac
ctggaccaggagatcctcaaagcgatgcaggaggtggacaagctctccaggatggtgtgg
gaagccaccaaccgcgcaaacgaagccaaggcgaacgctttggaggtgctgatcaaatcc
aaccggagcaaagagagagtggagcagagcaacgagcagctccgcaacctcatcaaagag
atacgagacctgctcaccaatgagaaggcagatgtttcagtgatcgaggcggtggccaac
gaggtgttggctctggagatgccgacctcgacagagaagctgaaggagctgacgaaggag
atcagggagaaggtgggcactctgaccagcgtggagaccatcctcagtcagagcgctgac
gacatccgggcggcagagacgctgctgaaacgggccaaggctgccagtgaagaggcgtct
aacatgaaggagacagcagatgtagtgagagcagtcctggttgagactgagcgtgctcag
agtatggccatggacgccatccaactggcccagaacaacacaaatggcactctggacctg
ctgatctcggtggagtcggagacggcgatgtcggagctgaagctcggtaacaccacgggc
cgtctggttcagctggaaagggaggtcggcctgctgagacagaacaacctggaggtggac
cgcctggcaaagatggccgactggaccaccgaccaggccagactgaacgccgaggaggcc
cagcaggagtttgacacggaggtgaaagataaaatggttgaggtggaggacctggtggag
gataaaggggaatcggtgctgcaggcgaggagaagagcggacatattgcagcaggaggcc
aaagagctgctcgcccagagcagcatcaagctgaaggaactcggagagttggagagttcc
tacgaggccaaccagttcatcctggaggcaaaagctgcagagctggccgagttagagcga
accgcccgtaggctcctggaggaaatcagccacaaagtgacgctgtacagcacctgtctg
tga
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