Perca flavescens (yellow perch): 114550011
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Entry
114550011 CDS
T07494
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114550011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114550011
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114550011
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114550011
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
114550011
NCBI-ProteinID:
XP_028426233
LinkDB
All DBs
Position
23:complement(2166739..2201908)
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AA seq
576 aa
AA seq
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MHRGLTNSTEIKVTRGMFGANRKKFMEGGIESDYADDSSLYYTQQSMFPPHRPDKDMLTS
SSASSTGQLSQLGASLYGPQSALGFPMRGMNSSAAPQLSRSGLNQSASQLPSHASTPNAG
TMHTPPSPSRGILPMSTRSVLNHSQQVGGPTGQSGGMGGVGVERGGGVGGGRSSSSGMGS
PSRSSPSIIGMPKQQQARQPFTINSMSGFGVNRNPGYNMNNSLPNNIFNGTDGSENVTGL
DLSDFPALADRSRRDGGSNPTPLLNPLAGRAPYEIETHQTRQHFSSLQLSNFVGMVTKPS
SEQSQDFSIHNEDFPALPGPNYQTKDPTSTNEDSKTNLNSSGKPTSNSDGPKFPGDKSSA
PSNNNQQKKGIQVLPDGRVTNIPIGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTT
LGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLSRYGEDLL
FYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNAYERGTYYFFDC
LNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcataggggacttacaaactcaactgaaatcaaggtgacacgcgggatgtttggtgct
aaccgaaagaagtttatggagggagggatagagagcgattacgcggacgactccagcctc
tactacacccaacagtccatgttccctccacaccgcccggacaaagacatgctgacgtct
tcctctgcttcctcaacgggtcaactgtcacagctaggagccagcctctatggcccgcag
agtgctttggggtttcccatgcgtggtatgaacagcagcgcagcacctcagttaagtcga
agtgggctgaaccagtctgccagccagctccccagtcatgccagtacacccaacgctggc
accatgcacacgcctccctcaccgagcaggggtattcttccaatgagcacccgaagcgtg
ctgaaccacagccagcaggtggggggtccgacggggcagtcgggtgggatgggaggggtg
ggagtggagaggggaggaggtgtcggaggagggaggagcagcagcagcggcatggggagt
cccagccggtcgtcacccagcatcatcggcatgcccaaacagcagcaagcacggcagcct
ttcactatcaacagtatgtcggggttcggtgtgaacaggaatccaggctacaacatgaac
aactccctacccaacaacatcttcaatggcacagacggcagtgagaatgtgacggggttg
gatctgtcggacttcccagcgttagcagacaggagtcggagggacggaggctcaaatccc
accccgctgctcaatccgctagccggtcgggctccgtacgaaatcgagactcatcagacc
aggcaacatttttccagtcttcaactgtccaattttgttggcatggtgaccaagccgtcc
agtgagcagtcgcaggacttctccattcataacgaagatttcccagctctccctgggcca
aactaccaaacaaaagaccccaccagcaccaacgaagacagcaaaacgaatctgaactca
tcgggaaagcccacctctaactcagatggtccaaagttccccggagacaagagctcggcg
cctagcaacaacaaccagcagaagaaagggattcaggtgctccctgacggacgggtgacc
aacatcccaatcggcatggtaacggaccagtttgggatgatcggcttgctgacgttcatc
cgggcagcagagacggaccccggcatggtccacctagcgctgggctccgacctcaccacg
ctcggtctcaacctcaactcaccggagaatctctatcctaagtttgcgtctccgtgggca
tcggctccgtgtcgaccgcaggacatcgatttccacgtcccctcagagtatttaaccaac
atccacataagggacaagttagcagctatcaagttgtctcggtatggtgaagatctgctg
ttttatctctactatatgaacggaggagacctactacaactcctggctgcagtagaactc
tttaacagggactggaggtaccataaagaggagcgggtttggatcacccgggctccgggg
atggagcccacgctgaagaccaacgcctacgagagagggacctactacttcttcgactgc
ctcaactggaggaaagtggccaaggagtttcatctggagtatgacaaactagaagagcga
cctcacgttccctccacattcaactacaatcctgcccagcaggccttctga
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