Perca flavescens (yellow perch): 114550093
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Entry
114550093 CDS
T07494
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114550093 (sox5)
Transcription factors [BR:
pflv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114550093 (sox5)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
114550093
NCBI-ProteinID:
XP_028426404
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All DBs
Position
23:complement(18302600..18550540)
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AA seq
789 aa
AA seq
DB search
MLLLTRDTDPYSSMLTEPELPQECNRMSSKRPASPYGRTDGEVTMATSRQRMEDEDSEGL
GGVIHLPLVSYCGKVSPRSPPNRNLDSPPNMERDCTKGSSLSPYPQHNATSPGKEDGGGG
GGGRPCGDGGSATGTLGTPERRKGSLADVVDTLKQRKMEELIKNEPEEAPSIERLLSKDW
KDKLLAMGSGHIGEIKGTADSLAEKERQLMGMIGQLSSLREQLLAAHEEQKKLAASQMEK
QRQQMELAKQQQDQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAA
AAAQQGFLMPPGFNYKPGCSDPYPLQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQV
SPGAKQHGGSLPPQANMGTHSPPTNTHSQSDKGRSSPLPNKAKDSEGAQPLNLSAKPKAS
ESKSPNSPPTSPQVAAAAATKLGPAGSMKHSVAPSSIGGPPTRVSSIADLLSTLSTTAYL
NDHEAVSKAFAEARQMKEQLKREQQVLDAKVSAVSNLSLNNGRSDKDKAALESLSQQLKQ
QAEDKFSHAMLDFTMSGDSDGSPSVSDSRIFREARGRGSAEPHIKRPMNAFMVWAKDERR
KILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRT
CLVDGKKLRIGEYKAIMRSRRQEMRQYFSVGQQGQLPLSSAGVVYPGALSMAGIPSPQMP
SEHSSMSSSPEPNANHHQNPHMAGLKGDEPRIKEEELRLDDSNGDVYDDFDYEDEEADYT
SDNDNHITQ
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgttgacgagagacacggacccttactccagcatgctcactgagcctgagcta
cctcaggagtgtaacaggatgtcttccaagcgaccagcctctccatatgggcggacagat
ggagaggtaaccatggcaaccagcagacagcgaatggaggatgaagatagcgagggactg
ggcggtgtcatccacctccccctggtctcctactgcggcaaggtgtcccctcgctcgccc
cccaaccgcaacttggacagcccccctaacatggagcgggactgcactaaaggaagctct
ctgagtccttacccccagcacaatgctacctcaccgggcaaagaggatggcggaggcgga
ggcggagggcggccctgcggcgacgggggctccgccacaggtaccctggggacccccgag
agacgcaagggcagcctggcagacgtggtggacacactgaaacaacgcaagatggaggag
ttgatcaagaacgagccagaagaggcccccagcattgagaggctgttgtcaaaggactgg
aaggataaacttttggccatgggctcagggcacatcggggaaattaaaggtactgcagac
agcctggcggagaaagagcgccaactcatgggcatgattggccagttgagcagcctgagg
gagcagctcctggcggcccatgaggagcagaagaagctggccgcctcgcagatggagaag
caaaggcagcagatggagctggccaagcagcagcaggaccagattgcccggcaacagcag
cagcttctgcagcagcaacacaaaatcaacctcctgcagcaacaaatccagcaggtccag
ggccaactccctccgctgatgattcccgtctttcctccagaccagaggactctggcagcg
gctgcagcccagcaaggcttcctaatgccccctggcttcaactacaagcctggctgcagt
gacccgtaccctctccagctcatcccaacaacaatggctgctgctgctgctgccacacca
ggcctgggacccctccaactccagcagttgtacgcagctcagctggcggccatgcaggtt
tccccgggagccaagcagcacggaggcagcctgcccccccaggccaacatgggcacacac
tccccacccaccaacacacactcacagagcgacaagggccgcagctccccgctaccaaac
aaggccaaggacagtgagggtgcacagccactgaacctgtcggccaagcctaaggcatcc
gagagcaagtcacccaactcccccccaacttccccacaggtcgctgctgctgctgccacc
aagctgggccccgccggctccatgaagcacagtgttgccccctccagcatcggaggtcca
ccgaccagagtcagctcgatagcagacttgttgtcgacgctgtccacgaccgcctacctg
aacgaccacgaggcggtgagcaaggccttcgccgaggcccggcagatgaaggagcagctg
aagagagagcagcaggtcctggacgccaaggtttccgccgtcagcaatctcagcctcaac
aatggacgctcagacaaggacaaggctgccttggagagtctgagtcaacagcttaagcag
caggcggaggacaagttcagccacgccatgctggacttcaccatgagcggagactctgac
ggctcccccagcgtgtcagactccagaatatttcgggaggctcggggccgtggcagcgcc
gagccgcacatcaagcggccgatgaacgccttcatggtttgggccaaggacgagaggaga
aagattctccaggccttccccgacatgcacaactccaacatcagcaagatcctcggctcc
cgctggaaagccatgaccaacctggagaagcagccctactatgaggagcaggctcgcctc
agcaagcagcatctggaaaaatacccagactacaagtacaagccgcgacccaaacgcacc
tgcctggtggacggcaaaaagctgcgcatcggcgagtacaaggccatcatgagatcccgc
agacaggaaatgagacaatacttcagtgtggggcagcagggccagttgcccttgtcctcc
gcaggcgtggtttacccaggtgccctgtcaatggcgggaatcccctcaccccagatgccc
tcagagcactccagcatgtccagcagccccgagcccaacgccaaccaccaccaaaacccc
cacatggcaggcctgaagggggacgagccccggatcaaggaggaggagctgcggctggac
gacagcaacggtgacgtgtacgacgactttgactacgaggacgaagaggccgattacacc
agcgataacgacaaccatatcacccaatag
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