Perca flavescens (yellow perch): 114550176
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Entry
114550176 CDS
T07494
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04142
Lysosome
pflv04144
Endocytosis
pflv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114550176
04142 Lysosome
114550176
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114550176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114550176
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pflv04147
]
114550176
Membrane trafficking [BR:
pflv04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
114550176
Exosome [BR:
pflv04147
]
Exosomal proteins
Proteins found in most exosomes
114550176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
114550176
NCBI-ProteinID:
XP_028426580
LinkDB
All DBs
Position
3:complement(24415742..24451144)
Genome browser
AA seq
1677 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVKRKNPELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPSNAWKEGQFKDIVTKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAALRASIDAYDNFDNITLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLAWFLNE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLEASESLR
KQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYTAAPGYGQPPQPSFGYSM
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctacctatccgcttccaggagcacctacagctccagaacctgggaatc
aacccagccaacattggattcagcactcttactatggagtccgacaagttcatctgtata
agagagaaagtgggagagcaggcccaggttgtcatcatcgatatggccgaccccaacaat
cccatccgcaggcccatctctgcagacagtgccatcatgaaccctgccagcaaagttatt
gcccttaaagcggcaaaaaccctgcagatctttaacattgagatgaagagcaagatgaag
gctcacacgatgaccgatgacgtgaccttctggaagtggatctccctcaacaccgttgcc
ctggtcacagacaatgcagtctaccattggagcatggagggtgattctcagccaatcaaa
gtctttgaccgtcactccagcctggcaggctgccagatcatcaactaccgcactgatgcc
aaacagaagtggttgctgcttattggcatttcagcacagcaaaaccgtgttgttggagcc
atgcagctgtactcagtggacaggaaagtgtctcagcccattgaggggcatgccgccggc
tttgcacagttcaagatggagggaaacactgaagagtccaccctgttctgctttgcagtg
cgaggacaggcaggaggaaagctgcatatcattgaagtagggactccaccgactgggaac
cagccatttccaaagaaagctgtggacgttttctttcctccagaagctcagaatgacttc
cctgttgccatgcagatcagttccaagcaagatgtagtctttctcatcaccaaatatggc
tacatccacctctatgacctggagactggaacttgtatctacatgaacaggatcagtggg
gagaccatttttgtcactgccccccatgagcctactgcgggtatcattggagtcaacagg
aaaggacaggtgttgtcggtatgcgtggaggaggaaaacatcattccctatattaccaat
gtgctccagaacccagacctggcactccgcatggctgtccgcaacaaccttgccggtgca
gaggagctgtttgcccgcaaattcaacaccctctttgcagcagggaattactcagaagct
gccaaggtggcagccaatgcacccaagggtatcctgcggaccccagacaccatccgtcgg
ttccagagtgttccagcccagccaggccagacgtctcccttgctccaatactttggcatc
ttgctggaccaaggccaacttaataagtttgagtctctggagctgtgcaggcctgtcctc
caacagggccgcaagcaactgttagagaaatggttgaaagaggacaagctggagtgctct
gaggagcttggagacttggtgaagtctgtagatcctactcttgccctcagtgtctacctc
agagccaacgtcccgaataaggtcattcagtgctttgcagagactggacagttccagaag
attgtcctctatgccaagaaggtgggctacactccagactggatcttcttgctaaggaac
gtaatgcggatcagtccagagcagggacttcagttctcccagatgctggtacaggacgaa
gagccacttgctgacattacacagattgttgatgtgttcatggagtacaacctgatccag
cagtgcacatccttcctactagacgccctgaagaataacagacccacggagggaccactg
cagacacgcttgctggaaatgaatttggtgcatgcaccacaggttgcagacgcaatcctg
ggcaatcagatgttcacccactatgaccgtgctcacgtggcacagctgtgtgagaaggcc
ggcctcctgcagagggcactggagcattatactgacctgtatgatattaagcgcgctgtg
gtgcacacacatcttctcaacccagagtggttggtgaatttctttggttccttgtcagtg
gaggactctctggagtgtctgagggccatgctatctgcaaacatccgccagaacctgcag
atctgtgtccaggtcgcctccaagtaccatgagcagctcactactcagtccctcactgaa
ctttttgagtcgttcaagagctttgaaggtttgttctacttcttgggttccattgtgaac
ttcagccaggatccagaggtccacttcaaatatatccaggctgcctgcaagacaggccag
atcaaagaggtggagagaatctgcagagagagtaactgctacgaccctgaacgtgtgaag
aacttcctcaaggaagccaagctgactgaccagctgcctttgatcattgtgtgtgaccgc
tttgattttgtccacgatctggtcctgtacctgtaccgcaacagcctgcagaaatacatt
gagatctacgtgcagaaggtgaacccaagccgtctgccggtggtcattggagggttactg
gatgtagattgtgctgaggatgtgattaagaacctgattttggtggttagagggcagttc
tccacagacgaactggtggctgaagtggagaaaagaaatcgactgaagctgctgctgcct
tggttagaggctcgtattcatgaaggttgtgaggagcctgctacccacaatgccctggcc
aagatctacattgacagcaacaacaaccctgagcgcttcctgagggagaacccctactac
gacagccgcgtggtcggcaagtactgtgagaaaagagacccccacctggcctgtgtggcc
tatgaaagaggacagtgtgaccaggaactgattcatgtgtgcaatgagaactcgctgttc
aagagtctgtcccgctaccttgtaaagcgcaagaaccctgagctgtgggcgagcgtgctg
ctggagaccaacaattacagaagaccactcatcgaccaggttgtccagacagccttgtct
gagacccaggatccagaggaggtgtccgtcacagtcaaggcctttatgaccgcggacctt
cccaatgagctcatcgagcttctggagaagattgtcctggataactctgtctttagcgag
cacagaaacctccagaatctgctcatcctgacagctattaaagctgaccggacacgtgtt
atggagtacatcaaccgtctggacaactatgatgccccagacattgcgaacatcgccatc
agtaatgagctgtttgaggaggcctttgctatttttagaaaatttgatgtcaacacctct
gctgtgcaggttctgattgagcacattggtaacctggacagagcttatgagtttgctgag
cgctgcaatgagccaccagtgtggagtcagctggcaaaggcccagcttcagaagggcctg
gtcaaagaagccattgactcttacattaaggcggatgacccttctgcttacatggaggtg
ggacaagctgcagcccaaagcgggaactgggaggacctggtcaagtttctgcagatggcc
cgtaagaaggcccgcgagtcatacgttgaaacagagttgatctttgccctggccaagacc
aaccgcctcgctgagctggaagagttcattaacggacccaataatgctcacattcagcaa
gtgggtgaccgttgttatgacgacaagatgtatgaggcagccaaactgctctacaacaat
gtgtccaactttggccgtctggcctccactctggtgcacctgggagagtatcaggcagct
gtggacggagctcgcaaggccaacagcacccgcacctggaaggaggtgtgttttgcgtgt
gtagatgggaaagagttccgtcttgcccaaatgtgtggcctgcatattgtcgtccacgcc
gatgaactggaggaactcatcaactactaccaggaccgcggttactttgaggagctgatc
accatgctggaggctgcccttggactggagcgtgctcacatgggtatgttcactgagctg
gccatcctctactccaaattcaaaccccagaagatgagggagcacctggagctcttctgg
tcccgtgtcaacattccaaaggttctcagggcagcagagcaggcccacctctggggggag
ctggtgttcctctacgacaagtacgaggagtacgacaacgccatcatcactatgatgaac
cacccatccaatgcttggaaggagggccagttcaaggacattgtcaccaaggtggccaat
gtggagttgtactacaaggccgtccagttttatctggagttcaaaccattgttgctgaac
gacctgctcatcgtcctctctccaagactggaccactcacgcgctgtcaacttcttcagc
aaggtgaaacagctgcctctggttaaaccttacctaaggtctgtccagaatcacaacaac
aagtcagtaaatgaggcactcaacaacctcttcatcattgaggaagactatgcggcatta
cgtgcttccatcgatgcctatgacaactttgacaatatcacgctggcccagggcctggag
aagcatgagttgattgagtttaggaggatcgcagcctaccttttcaagggcaacaaccgc
tggaaacaaagtgtggagctctgcaagaaggacaagctctacaaggatgccatgcagtac
gcatcagagtccaaagacatcgagctggcagaggagctcctggcttggttcctgaatgag
gacaagaaggaatgttttgcagcctgcctattcacctgctacgacctgctgcggcccgac
gtggtgctagagactgcctggcgacataacatcatggacttctccatgccatacttcatc
caggtcatgagggagtatctctctaaggtggacaaactcgaagcctcagagtccctgagg
aaacaggaggagcaagctaccgagtctcaacccattgtttacggcacaccccagctcatg
ctcacagcagggcccaacgtggccgtgcctcctcagcagccctatggctacggttacaca
gcagcaccaggctacggccagcccccacagcccagcttcggttatagcatgtga
DBGET
integrated database retrieval system
