Perca flavescens (yellow perch): 114550444
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Entry
114550444 CDS
T07494
Symbol
lrp6
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04150
mTOR signaling pathway
pflv04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
114550444 (lrp6)
04150 mTOR signaling pathway
114550444 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114550444 (lrp6)
Membrane trafficking [BR:
pflv04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
114550444 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
SGL
DUF5050
EGF
Motif
Other DBs
NCBI-GeneID:
114550444
NCBI-ProteinID:
XP_028427028
LinkDB
All DBs
Position
23:complement(1383743..1458830)
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AA seq
1618 aa
AA seq
DB search
MGMGVVLRSLLLCSFCFLIRGVPLLLYANRRDLRLVDAAHEKANATVVVGGLEDAAAVDY
VYARGLIYWSDVSEEAIKRTVFNQSGASAVQTVVPGLASPDGLACDWLGSKLYWTDSETN
RIEVAELDGSLRKVLFWQELDQPRAIALDPERGYMYWTDWGEIPKIERAGMDGTNRSMII
DRDIYWPNGLTLDYSQEKLYWADAKHNFIHRANLDGSSREVVVKGELPHPFALTLYEDTL
FWTDWNTHSIHSCRKQTGTEQRVVHSDIFSPMDIHVFSAKRQNILATSLCSVKNGGCSHL
CLLSPVKPFFQCACPTGVQLLEDAKTCRDGATQMLLLARRTDLRRISLDTPDFTDIILPA
EDIRHAIAVDYDPVDGLVYWTDDDVKAIRRSRLDGSEAEFVVTSQVNHPDGIAVDWIARN
LYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADL
DGTERLVMVNTSLGWPNGLALDYDERKLYWGDAKTDKIEVMNMDGTSRRVLVEDKLPHIF
GFTLLGDYIYWTDWQRRSIERVHKRTAERQFIIDQLPDLMGLKATSVHTSSGTNPCAESN
GGCSHLCLYKPVGVQCGCPIGLELIADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAI
PLTGVKEASALDFDITDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLG
KNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRA
AMDGTGRITLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGQDREVIADDLPHPF
GLTQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACAST
NGHCSHLCLAVPVSSFVCGCPAHFSLNYDNKTCSAPTSFLLFSQKSAINRMVIDEQQSPD
IILPIHSLRNVRAIDYDPLDKQLYWIDSKQNVIRRAQEDGNQSVTVVSSSLAGPSQGLQL
YDLSIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNL
LERSPKIERAALDGTEREVLFFSGLGKPVALAIDNELGKLFWVDSDLRRIESSDLSGANR
IVIADSNILQPVGLTVFGNHLYWIDKQQQMIERIDKTTREGRTKIQARIAYLSDIHAVHE
LDMSEYSKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPEQFSC
TSGEVDCIPKAWRCDGYPECDDGSDEENCPVCSESEFQCDSRQCIDLSLRCNGEVNCQDR
SDENKCEVRCPPDQFTCSNGQCIGKHKKCDHNMDCTDNSDEIGCYPTEEPPPPSNNTIGS
IVGVVMALFVVGGVYFVCQRVLCPQMKDDGETVTNDFVVHGPSSVPLGYVPHPASLSSSL
PGMSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRS
QYTMEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPLKSAVAAA
KGYTSDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYXPSPCTDSS
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggggatgggtgtcgtgctgcggagcctgttgttgtgtagtttttgttttctcatacga
ggcgtgccgctgctgctgtatgcgaaccgccgtgacctccgtctggtggacgcggcgcac
gagaaggccaacgccacggtggtggtgggggggctggaggacgccgcggccgtggactac
gtctacgcgcggggcctcatctactggagcgacgtgagcgaagaggccatcaaacgcacc
gtgttcaaccaatcgggggccagcgcggtgcagacggtggtccccgggctggcctcgccc
gacggactggcctgcgattggctggggagtaaactctactggacagactcggaaaccaat
cgcatcgaggtggccgagctggacggctcgctgaggaaggttctgttctggcaggagctg
gaccagccgagggccatcgctctggaccccgaacgagggtacatgtactggaccgactgg
ggcgagatcccaaagatcgagcgtgcggggatggacgggaccaaccggtccatgatcatc
gaccgggacatctactggcccaacgggctgaccctggactacagccaggagaagctctac
tgggccgacgccaaacacaacttcatccaccgcgccaacctggacggctcctccagggag
gtggtggttaaaggggagctacctcacccgttcgccctcaccctgtacgaggacacgctg
ttctggaccgactggaacacccactccatccactcctgcaggaaacagaccggaaccgag
cagcgcgtggtccactccgacatcttctcgcccatggacatccacgtcttcagcgccaag
agacaaaacatcctggccaccagtctgtgctctgtgaagaatggaggctgttcccacctc
tgcctgctctccccggtgaagcccttctttcagtgtgcctgtcccaccggagtccagctg
ctggaggacgccaagacctgccgagacggtgcgacccagatgctgctgttagcgcggcgc
accgacctgcggcgcatctctctggacacgcccgacttcacggacatcatcctgccggcg
gaggacatccggcacgccatcgccgtggactacgaccccgtggacggcctcgtgtactgg
accgacgacgacgtcaaggccatcaggcgctcgcggctggacggcagcgaggccgagttc
gtggtcacgtcgcaggtcaaccacccggacggcatcgcggtggactggatcgcccggaac
ctgtactggaccgacaccggcacggaccgaatcgaggtcacgcgcctcaacggcaccatg
cgcaagatcctgatctcggaggacctggacgagccgcgtgctatcgtgctggacccggtc
gcaggctacatgtactggacagactggggtgaggtgccaaagatagagcgtgctgacctg
gacgggacggagcgcctggtgatggtcaacacgtctctgggatggcccaatggtctcgcc
ctcgactacgacgaacgcaaactctactggggggacgccaagaccgacaagatagaggtg
atgaacatggacgggacgtcccgccgcgtgctggtggaggacaagctgccccacatcttc
ggcttcacgttgctaggcgactacatctactggacggactggcagcgccgcagcatcgag
cgcgtccacaaacgcaccgcggagcgtcagttcatcatcgaccagctgcccgacctcatg
ggcctcaaagccacgtccgtccacacgtcctccggtaccaacccttgtgcggagagtaat
ggcggctgcagccacctgtgtctctacaagccggtgggcgtccagtgcggctgtcccatc
ggcctggagctgatcgccgacatgcggacgtgcatcgtgcccgaggccttcctgctcttc
tcccggcacaccgacatccgccgcatctccctggagaccaacaacaacaacgtggccatc
ccgctcaccggcgtcaaggaggcctcggcgctcgacttcgacatcaccgacaaccgcatc
tactggaccgacattactctgaagaccatcagccgggcctttatgaacggcagcgccctg
gagcacgtggtggagttcggcctggactacccagagggcatggcggtggactggctgggg
aagaacctgtactgggccgacaccggcaccaaccgcatcgaggtggccaaactggacggg
cagcaccgacaggtcctggtctggaaggatctggacagtccgcgcgctctggctctggat
cccgccgaagggtacatgtactggacggagtggggggggaagccgaagatcgaccgagcg
gcgatggacgggacggggcgcatcacgctggtggccgatgtgggccgagccaacggactc
accatcgactacgccgagcggcgcctctactggaccgacctcgacaccacgctcatcgaa
tcctccaacatgctcggtcaggatcgcgaggtgatagccgatgacctccctcacccgttc
ggcctcacccagtaccaggactacatctactggacggactggagccagcgcagcatcgag
cgcgccaacaagaccagcgggcagaaccgcaccgtgatccagggccacctggactacgtc
atggacatcctggtcttccactcgtcccggcagggcggctggaacgcctgcgcctccacc
aacgggcactgctcgcacctctgcctcgccgtgcccgtcagcagcttcgtgtgcggctgc
cccgcccacttctccctcaactacgacaacaagacctgcagcgctccgacttcgttcctg
ctgttcagtcagaagtcggccatcaaccgcatggtgatcgacgagcagcagagtcccgac
atcatcctgccgatccacagcctgaggaacgtgcgagcgatcgactacgacccgctggac
aaacagctgtactggatcgactccaagcagaacgtcattcgccgcgctcaggaggacggg
aaccagagtgtgacggtggtgtcgagttctctggccggacccagccagggcctgcagctg
tacgacctgagcatcgacatctacagccgcttcatctactggaccagcgaggtcaccaac
gtcatcaacgtgacccgcacggacggcagccgagtcggtgtggtgctgagaggagagcac
gacaagcccagagccatcgtggtcaacccagagagagggtacatgtacttcaccaacctg
ctggagcgctctccaaagatcgagcgcgcggcgctggacgggacggagcgagaggttttg
ttcttcagcggtttggggaagcccgtggcgctggccatcgataacgagctggggaagctg
ttctgggtcgactcggacctgagacgcatcgagagcagcgacctctccggagccaatcgg
atcgtgatcgcagactccaacatcctgcagccggtgggcctgacggtgttcgggaaccac
ctgtactggatcgacaagcagcagcagatgatcgaacgcatcgacaaaaccacgcgggag
gggcgcaccaagatccaggcgcgcatcgcctacctcagcgatatccacgccgtgcacgag
ctcgacatgagcgagtacagtaaacacccgtgcacctgggacaacggtggctgctcccac
atctgcatcgtgaagggagacgggacgactcgctgctcgtgtcccgtccacctggtgctg
ctgcaggacgagctctcttgtggagagccccccacctgctccccggagcaattctcctgc
acctccggcgaagtcgactgcatcccgaaggcctggaggtgcgacggttaccccgagtgt
gatgacggcagcgacgaggagaactgtcccgtctgctccgagtcggagttccagtgcgac
agccggcagtgcatcgacctgagcctgcgctgcaacggagaggtcaactgccaggaccgc
tcggacgagaacaagtgtgaagtacgctgtcctccggaccagttcacctgctctaacggt
cagtgcatcgggaaacacaagaagtgcgaccacaacatggactgcaccgacaactctgat
gagatcggctgctacccgaccgaggagcccccgcctccgtccaacaacacgattggctcc
atcgtgggcgttgtcatggcgctgttcgtggtgggcggagtctacttcgtgtgccagcga
gtcctctgtccacagatgaaggacgacggagagacggtaaccaacgacttcgtggtgcac
ggaccgtcctcggtgccgctgggatacgtcccgcacccggcatctctgtccagctcgctg
ccaggtatgtccagagggaagtctgtgattggctccctgagcatcatgggcgggagcagc
gggccaccgtacgaccgcgctcacgttaccggagcttcgtccagcagctcgtccagcacc
aagggaacatacttccctccgatcctgaatcctcctccatctccggcaacggtccgctct
caatacaccatggagtttggttattcctccaacagcccctcaacacacagatcctacagc
taccggccatacacctaccgtcacttcgccccgcccacgaccccgtgtagcaccgacgtg
tgcgacagcgactacacgccgggtcgccgggcgccgctcaagtccgccgtggccgccgcc
aagggctacaccagcgacctcaactacgactcggagcctttcccgccgccgccgacgccg
cgcagccagtacctgtcggcggaggagaactgcgagagctgcccgccgtcgccttacacc
gagcgcagctactcgcaccacctctacnncccctcgccgtgcacggactcctcgtga
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