Perca flavescens (yellow perch): 114550507
Help
Entry
114550507 CDS
T07494
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114550507
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114550507
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
114550507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
GRASP55_65
Motif
Other DBs
NCBI-GeneID:
114550507
NCBI-ProteinID:
XP_028427106
LinkDB
All DBs
Position
23:complement(14865933..14884096)
Genome browser
AA seq
804 aa
AA seq
DB search
FGLLIPQVNRRNFSKVDHEEAVVEAIRRDPIVVQVLRRTPTRSTAAVAHNYSGAPQDVSV
VDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHTMEHEFYECPEYLSNIP
AEVERTEEYEYEEVELCRQNSQEKLGLTLCYRTDDEEDTSIYVSQVEPNSIAARDGRIKE
GDRILQINGCEVQDREKAVALLSSEEARSIILLVTRPEIQLEEEVWLDDEQQELVEELKM
EILEERRKQKEHKFDRGDEHLGEEDITTDTATCSSNNQDKDSGFGRSTDSPEHQPLLARL
HRRTPAHCLRERWRAEHPHTRRGTVVPQNTQSPRTLSKGQGHEGVVSIRNGGGGILGLEN
RFEQLLELKCQIRNGGECGVYSIRHSIECSLTEHGVDEDGVDGVGGENGVEQELRMLNEE
LRSIELECQSIMQAHQLRQAHQLDPSQPTSCSPGRSPKDEHKRHGRLADIHEYPERSDID
RIREKDSSSAYNTAESARSTPLGMERSPDHSLQRHISITNQKNLRLASSTPSSPIPIPKP
QGTPSHSRPADPGSVISSSPDQSNPSRSESDPALPADDERCKKKGRTRDSRRGLPYGSYQ
TTPYQGQGGSRQLQSYMQLLQQHSSLEYSQSQLSLLSVCRDPVHRSVRPGEPRLEWKVKV
RADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMKMGRYWSKEERKQHLAR
AREQRKRREFMQKSRLECLKEGPASGAEGRKEINILELSHKKMMKKRNKKILDNWMTIQE
LMSHGARVPEGSKVHNAFLSVTTV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
tttggtctcctcatcccccaggtgaacaggcgcaacttctccaaggtcgaccatgaggag
gcagtggtggaggccatcaggcgagaccccatcgttgtccaggttctccggcgaaccccc
accagatccacggccgctgttgcacataactacagcggcgcgccacaggacgtgtctgtg
gtggatgtttgcacgcaaactgacattaccttcgagcacatcatggcactggcgaagctt
cggcctgctactccgcccgtccccgacatctgtccctttcttttgtccgacagttgtcat
tccatccacaccatggagcatgagttttatgaatgtccagagtacctgtccaatatccca
gcagaggtggagaggactgaagaatatgagtatgaggaggtggagctgtgcagacagaac
agccaggagaagcttggcttgacgctgtgctacaggaccgacgatgaggaggacaccagc
atctatgtcagccaggtggagccgaacagcatagcagcaagagatggacgcatcaaggaa
ggagatcgaattctacagataaatggctgtgaagtgcaagacagagagaaagctgttgcc
ttgttgtcaagtgaagaagcaaggagcatcatactactggtgacaagaccagaaatccag
ctggaggaggaggtatggctggatgatgagcaacaggagctcgtggaggagctgaagatg
gagatcctggaggagaggaggaagcagaaggaacataaatttgacaggggagatgagcat
ctaggtgaagaagacataacaacagacacagccacctgttcctccaacaatcaagacaaa
gacagtgggtttggacgcagtacagacagtccagagcaccaaccactgctggctagactc
cacaggaggaccccagcccactgtctgagggagcgatggcgggcagagcatccacacaca
agacgggggactgtagtgccacagaacacccagagtccaaggacattgtccaaaggccaa
ggccatgaaggggtagtcagtattcgcaatgggggaggcgggatcctaggtttagagaat
cgctttgagcaactccttgagctcaagtgtcaaatccggaatggaggcgagtgtggggtg
tactcaattcgacacagtatagagtgtagtctcactgagcatggagtggatgaagatggc
gtagatggtgttggaggagaaaatggagtggagcaggagttgaggatgctaaatgaggaa
ctgcgcagcattgagcttgagtgccagagcatcatgcaggcgcatcagctccgccaggcc
caccagctggacccctcgcaacccacgtcctgctcgccaggacggagccccaaagacgaa
cacaagcgacatggcaggttggccgacatccacgagtacccggagcggtcagacatcgac
aggatccgagagaaggacagctccagtgcctacaacacggcggagagtgcaaggtcgaca
ccactaggtatggaaagatctcctgatcattctctgcagagacacatcagcatcaccaac
cagaaaaacctcagactggcttcctccacaccatccagccccatccctatccccaagccc
cagggtacacctagtcatagcagaccagcagacccaggctctgttatctccagcagccca
gaccagagcaacccttcccggtccgaatcagacccggccctgcctgcagacgatgagagg
tgtaagaagaaagggaggaccagagattctaggagggggcttccctatggttcttatcag
acaaccccctatcaaggccagggaggatccaggcaactgcagagctacatgcagctgcta
caacagcactcatccctggagtattcccagagccagctgagtctgctcagtgtctgtcga
gatcctgtgcaccggagcgtacgccctggggaaccccgtcttgagtggaaggtcaaggtt
agggctgacggcacacgctacgttgcccggaggcctgctcgtgaccgcatcctgagggag
cgggcactaaggatcagagaggagaggagcggaggcatgaccacagatgacgacgctatg
agtgagatgaagatgggccgctactggagcaaagaggagaggaagcagcacttggcgcga
gccagggagcaaaggaagaggagggaattcatgcaaaagagccgcctcgagtgtctaaag
gaggggccagccagtggagctgagggcaggaaagagatcaatatcttggagctcagtcac
aaaaagatgatgaagaaacgaaacaaaaagatcctggataactggatgaccatccaggag
ctgatgagccatggggctagagtcccggagggctccaaagtacataatgccttcctatct
gtcacaactgtttag
DBGET
integrated database retrieval system
