Perca flavescens (yellow perch): 114550701
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Entry
114550701 CDS
T07494
Symbol
zbed1
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114550701 (zbed1)
04121 Ubiquitin system [BR:
pflv04121
]
114550701 (zbed1)
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
114550701 (zbed1)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
114550701 (zbed1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
DUF659
DUF4431
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
114550701
NCBI-ProteinID:
XP_028427275
LinkDB
All DBs
Position
24:14760781..14768761
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AA seq
681 aa
AA seq
DB search
MEGKSSGPSCSGPNLVAHPRAKSKVWKYFGFDTDAYGCILHWKRIYCRVCMSQIAYSGNT
SNLSYHLEKNHPVEFSEFVKSNTDQMREAFATAFSRIKTEPSGPHVQQQSQDTNLRQSSG
YENRRHNDLTTAVINFICEGLYPVSVVEEPTFKTLMSTVDPGYSPPSKSDLAVKMLPQMY
CRARDMVFSELAGVVNCGVTTDLWQSQTQNRSYISLSVHSVNYNSATGFSMTNKCLKTFE
VQEDNTAENITRAMYEAFVEWGITHKVSGATTNGSVDIMKACSLLELSVEMPCLGHTVNR
AMDEAFQLPRVDSFLGCCRKLIDHFQEPAMYLLRDKQKQHGLPQCALITDRGRPWLATLA
MLQRLKEQQVVVTATLVEGSSAHHFSFDSPDWALLEGLICVLQPFKVVANMITSCRYPTI
SMVRPVLHMLLNTTLKAKEGDLKEISMTKEVISKVLSSTYSQNTQLSQEISTFLNIATFL
DPRYKKLPFLSTQERSKIESNIVDEAKAVLEKQIAERPCLGEFSLISDEPPSKKQTPLRE
SSVGSATQDNPLAAIFRQSDADQSQEELHAQVVEELSNYKSQRVLGLNEDPLLWWSSHAP
LFPTLPKVLQKYWCVPATCVPPHRLLSSSGTVLSGKRNRIAPALVDQQVFLYENSRSYCE
PEACEDDLDNEGSGNLGQQLE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaaaagttcaggaccttcatgctctggccccaatctggtggcacacccgcgg
gcgaaaagcaaagtctggaaatactttggctttgacaccgacgcctatggctgcatattg
cactggaaacggatttactgccgtgtatgtatgagtcaaattgcctactctggaaacacc
tccaatctttcttaccaccttgaaaagaaccaccccgtggagttcagcgagtttgtgaag
agcaacacggatcagatgcgagaggcgtttgccacagcgttctccaggataaagactgag
ccctcgggtccacacgttcagcagcaatcgcaggacaccaacttaaggcagagctcgggc
tatgaaaacagacgacacaatgacctgacaacggccgtcatcaacttcatctgtgagggg
ttgtaccctgtgtctgtcgttgaagagcctactttcaagacgttaatgagcaccgttgac
cctgggtactctccaccgagcaaaagtgacctggcagttaaaatgcttcctcagatgtac
tgccgtgcccgggacatggtctttagtgaacttgctggggttgtgaactgtggcgttact
acagatctttggcaaagccaaacccagaaccggtcgtacatttcgctctctgtgcattct
gttaattacaacagtgctactggcttctctatgaccaacaagtgtcttaagactttcgaa
gtgcaagaggacaacacggccgagaacatcacaagagcgatgtatgaggcatttgttgaa
tggggaataacccataaagtcagcggtgccaccacaaacggttcggtggacatcatgaaa
gcatgctccctcctggagctgtccgtggaaatgccttgccttggacatactgtcaatcgc
gcaatggatgaagccttccagctgccgcgtgtcgacagctttttgggatgttgccgcaag
ctcatcgatcatttccaagaaccggcaatgtatctgctaagggataaacagaagcagcat
ggcctccctcagtgtgcactcatcacagaccgaggtagaccttggttggccacgttggca
atgttgcagcgactgaaagagcaacaggttgttgtaactgcaacgcttgtagagggttca
agcgctcatcatttcagctttgatagccctgactgggccttgttggagggcttgatttgc
gttctccagccttttaaagttgtggcaaacatgatcacttcttgcaggtacccgaccatt
agcatggttaggcccgtgcttcatatgctgctgaacaccactcttaaagccaaggaaggg
gacctcaaagagatcagcatgaccaaagaggtcatctcaaaggtcctgtcaagcacctat
tcacagaacacccagctatcgcaagaaatttcgacgttcctcaacattgcgacattcttg
gatcctcgatacaagaagctgcctttcctgtccactcaggaacgctccaaaattgagagt
aacatcgtggacgaggcaaaagcagtccttgagaagcagattgccgagcgaccgtgccta
ggggaattctccttgatatcagacgagccacctagcaaaaagcagacgcctctacgagag
tcttcagtcggcagtgcaacccaagacaaccctttggctgccatatttcgtcagtccgat
gcagaccagagccaggaggagctgcatgcccaggttgtagaggagctgagcaactacaaa
tcgcaaagagtcctaggtctgaatgaagaccctttgctgtggtggtcgagtcatgcgccc
ttgtttcccaccctccccaaggtgctccagaagtactggtgtgttcctgccacctgtgtc
cctcctcacaggctgttaagttcctctgggacggtcctgtctgggaaaaggaaccgcata
gctccagctttagtagatcagcaggtcttcttgtatgagaactcgcggagctactgtgag
cctgaagcctgtgaggacgatttggacaatgagggaagtggtaatctgggccagcaactt
gaatga
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