Perca flavescens (yellow perch): 114550778
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Entry
114550778 CDS
T07494
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
114550778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114550778
Enzymes [BR:
pflv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114550778
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114550778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
Hydantoinase_B
DUF6746
DUF948
Exonuc_VII_L
zf-RING_6
U-box
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
114550778
NCBI-ProteinID:
XP_028427435
LinkDB
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Position
24:5880508..5887765
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AA seq
814 aa
AA seq
DB search
MSAKLWTEEQFNCPVCLDLPNDPVTIPCGHSYCMACIKDYWSKDDPKGVYSCPQCRQSFS
PKPSLSRNTMLAEAVEQLRKGVRTADVRESMRSARGLAAAASSSRSKGKLSSSAVPCDMC
KGEERAAVKSCLVCMSSFCETHLKPHQTKKALKQHELIAPTANLAEKICTQHKYLQEFFC
RQCKVFVCWLCTSNQHKGHECVSTKAERLEKQKVMSEMYAENQQKLKDREQELKDMKKMM
DVTKRSLDRVHEDTEKVLSELQCSVERLQELLEEVLHQASQEKMGHAQEVTNSLQAEIKE
LKKRDMEMKDLALCEDHIHYLETYESMCHPLESGDLPPVLVNLEASFEPAREAILDLRDR
VEDLCNQELDKITKQVNDTTLFTLRDSNRSAGQKGGIFKLFSGLGSRNTNNRSPATPPSI
SVGARSTDRRGLGIGLKSQDVRSRDTPRVDRGNTNSPRHRDRQRGEERETVRETNSSPSP
TPSRRESPSLWSRSSQSQAVPAVAQTPTPMPATPAPTPAPAPASTGGSSFSRMASISSLF
CSHRRGTKEATPASPANNPLSPGGNPWGMAALPETPTEINPGLFLDSPTPGIMDNAPAFP
ALREINLDSIQAPEPRTREEFLQYSVTLTLDSNTAHRRLALSDGNTKATLQVAAQPYPDT
PQRFDGWTQVMCQSPLYAQRSYWEVEWRGRGSSMGVVYGALNRKGSDARSGLGHNAQSWT
LELSDTCCSAMHDNEKKDIPVTYSPRLGIYLDLSTGTLAFYSVAESMTHLHTFRANFTQP
LYAAFGVGSGVGVGLDFALGQFSSSSDSIKICPM
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctaaactgtggacagaggagcagtttaactgccctgtgtgtctggatctccca
aatgatccagtcaccatcccgtgtgggcacagctactgcatggcctgcatcaaggactac
tggagcaaggacgaccccaagggggtctacagctgcccccaatgccgccagagcttcagc
cccaagccctccctgtccaggaacaccatgctggctgaggctgtagagcagctccgcaaa
ggcgtccgcacagccgacgttcgtgaatccatgcgaagcgcccgagggctcgccgccgcc
gcctcctcatccagatccaaagggaagctctcctcctcagcagtgccgtgcgacatgtgc
aaaggagaagagcgagcggcggtcaagagctgcctggtgtgcatgagctcattctgcgaa
acgcacctgaagccccaccagaccaagaaggccctgaagcagcatgagctgatcgcaccc
acggccaatctggctgagaagatctgcacccagcacaagtacctgcaggagttcttctgt
cgccagtgtaaggtgttcgtctgctggctgtgcaccagcaaccagcacaaaggccacgag
tgtgtgtccaccaaggctgagcgcttggagaaacagaaagttatgtccgagatgtatgca
gagaatcagcaaaaactgaaagaccgagagcaggagctgaaagacatgaagaagatgatg
gatgtgacgaagcgttctttagacagggtgcatgaagacacggagaaggtgctgtcggag
ctgcagtgctcggtggagcgcctgcaggagctgctggaggaggtgctgcatcaggccagc
caggagaagatgggacatgctcaggaggtcaccaacagcctgcaggctgagattaaggag
ctgaagaagagggacatggagatgaaggacctggccctctgtgaggaccacatccattac
ttggagacatacgagtccatgtgccatcccttagagtcgggggacctgccccctgtcttg
gtcaatctggaagcttcctttgagcctgcacgagaagccatcctagacctcagggaccga
gtcgaggacctgtgcaaccaggagctggacaagatcaccaaacaagtcaatgacacaact
ctgttcactttgcgagactccaaccgcagcgcgggacagaaaggagggatttttaaattg
ttttctggtctgggttctcgcaacacaaacaaccgttcaccagctactccacccagtatt
tcagtgggagcacggagtacagacagacgtggacttggtataggcctcaaaagtcaagac
gtgaggagtagagacacaccacgagtagaccgaggaaacacaaactcacccagacaccgg
gacagacagaggggagaggaaagagagacagtgagggagaccaactcaagccccagcccc
actcccagccgcagagagtctccgtctctttggagcaggtccagtcagagccaggctgtc
cctgctgtggcccagactccgactccaatgccagccaccccagctccaactccagcccct
gccccagcatcaactggagggtctagtttcagtcggatggcatcgatcagcagcctcttc
tgctcccatcggcgtggcaccaaagaggccaccccagcttccccagccaataacccactg
tcaccaggaggaaacccatgggggatggctgctctgcctgaaacaccaacagaaattaac
cccggcctcttcttggactcgcccacccccggcatcatggataacgctcctgctttccct
gcattgagagaaatcaacctcgacagcatccaggccccagagccgaggaccagagaggag
ttcctacagtactctgtgacgttgacccttgactccaacacggcccaccgacggctggct
ctctccgacggcaacactaaagccaccctgcaggtggcggcgcagccctaccccgacact
ccgcagcgttttgatggctggacccaggtgatgtgccagagccccctgtacgcccagcgc
tcttactgggaggtggagtggagaggccggggctcctctatgggcgtagtatacggggcg
ttgaacaggaagggctcagacgcccgatcggggctcggtcacaacgcccagtcctggacc
ctggagctgtcggacacctgctgctcagccatgcacgacaatgagaagaaggacataccg
gtcacctactccccccgcctgggcatctacctggacctgtccacggggacgctggccttc
tacagcgtggcagagagcatgacgcaccttcacaccttccgcgctaacttcacccagccg
ctttacgctgccttcggggtgggcagcggagtcggggtgggtctggacttcgccctgggc
cagttcagctccagctctgacagcatcaagatctgtcccatgtga
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