Perca flavescens (yellow perch): 114550881
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Entry
114550881 CDS
T07494
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04136
Autophagy - other
pflv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114550881 (atg13)
04136 Autophagy - other
114550881 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114550881 (atg13)
03029 Mitochondrial biogenesis [BR:
pflv03029
]
114550881 (atg13)
Membrane trafficking [BR:
pflv04131
]
Autophagy
Autophagosome formation proteins
ULK complex
114550881 (atg13)
Atg1 complex
114550881 (atg13)
Mitochondrial biogenesis [BR:
pflv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
114550881 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
114550881
NCBI-ProteinID:
XP_028427638
LinkDB
All DBs
Position
24:10319223..10327560
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AA seq
535 aa
AA seq
DB search
MDSGLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPV
GTITLSCAYRINLAFMSNRQFERSAPIMGIIVDHFVDPPCSSQRANMGHPCNYRAPDEED
GYAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDTLPLPLAPGLVTHTLYAS
RLSYHHPAQTGAAELCHPAANQGLHAGKDHGGVVLVPQPPHGADAHLTVEHAANTPGSSG
GDDGLTHSGERRRDEGSSVSPSDPVESLNAFTRKIGAFVNKSNTPITAASLDLPFAAFAP
RGLDSEENDPMVQPPDSPPCPSPLQASLHSQGSEGSGQQDDFVMVDFRPAFSKDDLLPMD
LGTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLAVYEKNIDEFDAFVDMLQ
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctgagtccccaggataaaaaagacttggacaagttcattaagttcttt
gccttgaagaccgtccaggtgattgtccaagctcgtctcggagagaaaatatgcactcgc
tcgtcctcatcgcctactggctctgattggtttaatttggccatcaaagacatcccagag
gtgactcatgaagccaagaaggcactggctggccaacttccaggaatcggacgctccatg
tgtgtcgagatctccctgaagacatcagagggggactcaatggagttagagacctggtgc
ctggagatgaatgaaaagtgtgataaggacatcaaggtttcatatacagtctacaatcgt
ctgtctgtccttctgaagtctctgctggccatcaccagagtaacacctgcttataaactg
tctagaaagcaaggacacgactatgtcatattatacaggatttacttcggggaagtccaa
ctgagtggattaggagaaggttttcagacggtgcgtgttggtgtcgttggcacccctgtt
ggcacaatcacactttcatgtgcttaccgcatcaacctggcattcatgtccaacagacag
tttgagcggtcagctccaatcatggggatcatcgtggatcactttgtggatcctccctgc
agcagccagcgtgccaacatgggacatccctgcaactacagagctccagatgaggaggac
ggatatgcaggggttcaggattcacaggaggtctgcaccacctccttctccacctccccc
ccctcacagtgtgtgtgtacactgagtccttcgccctctaaactgtctaagcccctccct
ctggacactctgccgcttccattggctcctggacttgtcactcacactctgtatgcttcc
aggttatcatatcatcatccagctcaaacaggagctgctgagctttgtcaccctgctgca
aaccagggtttgcatgctgggaaggatcacggtggggttgtgttggttccccagcctcct
catggagcggatgcccatctgacggtagagcacgccgccaacacacctggcagcagtggc
ggcgatgacggcctgacgcacagtggagaaaggaggagggacgaagggagcagcgtttct
ccctctgaccccgtggagtctctcaacgcattcacgcggaaaatcggagcttttgtcaat
aaatccaacacaccgataacagcagccagtctggacctgccattcgctgcatttgctcct
cgaggcctggactcggaggagaatgatcccatggtgcagcctccagactctcctccttgc
ccgtcccccctgcaggccagcctccattctcagggctcagagggatcggggcagcaggat
gactttgtcatggttgactttcgtccagccttctctaaagatgacttgttgccaatggat
ctaggcactttctacagagagtttcaaaaccctcctcaactagccagcctctcactacac
atcagctcccagtccatggctgatgacttggactcactgccagagaaactggccgtttat
gagaaaaacattgacgagtttgatgcttttgtggacatgctccaatag
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