Perca flavescens (yellow perch): 114550939
Help
Entry
114550939 CDS
T07494
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114550939 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114550939 (dhx36)
03012 Translation factors [BR:
pflv03012
]
114550939 (dhx36)
Enzymes [BR:
pflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114550939 (dhx36)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114550939 (dhx36)
Translation factors [BR:
pflv03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114550939 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
HerA_C
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
114550939
NCBI-ProteinID:
XP_028427741
LinkDB
All DBs
Position
3:13861592..13896774
Genome browser
AA seq
1083 aa
AA seq
DB search
MSSGYGGGGGRRGRRGGRGNRDGSRERWDRGGGGGSRGHSSDFDQDRGGGGRGGQRDRPP
PHLKGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNDQPGPWRDGM
DARASTSGSWRRAANSSGHCYFDGDVSEEEKQKIEFKSEEEEEEVTPGQKKATHKSHRYF
SPAVVKDEPPEAWDEEEQQQQEEEEEEEEEEEEEKEKLRREDKDLEFLFQEVVRNSSLDE
SLKRDLQTKESDPKYKEMLKFREKLPSYGKKEELVRLINSNRVLVVSGETGCGKTTQVTQ
FILDDYINRGVGSMCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPR
RQGSVLYCTTGIILQWLRSDPLLSSISHLVLDEIHERNLQSDVLLVIVKNLLDFRDDLKI
ILMSATLNAEKFSKYFDNCQIIHIPGLTFPVKEFLLEDIVEMTRYRSQNRDSRPSWKKGF
WQGRHSRPEKEEKEAEYKESWPSYARTLQDRYSDNTIEALETLDNDEKIDLELIVALIRH
IVLNEEEGAILIFLPGWAEISSLNDLLTAQKMFQSDRFVIIPLHSLMPTVNQTQVFKKPP
PGIRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTNNNISTMTAEWVSLANAKQRKG
RAGRVCPGKCYHLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGSIAQFLEKALDP
PTEEAVNLAIKNLIELNALDRSENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTI
AASLSFKDPFFIPLGKEKMADMRRKTLSRNSKSDHLTIVNAFQGWVEAKQRGARYEREYC
WDNFLSANTLQMLHNMKGQFAEHLMRTGFVSSRDPKDPTSNVNSDNEKLIKAVIVAGLYP
KVAMIRPTNSKKRPGVKVYTQADGKVCIHPKSVNAEESQFNYTWLIYHLKMRTSSIFLYD
CTEVSPFSLLFFGGDITIQKDEDQETIAVDQWIVFRSPARIAHLVKSLKRELDSLLEEKV
RNPAPVNWQNRQSKDCAVITAIIDLITTQEKPTGSTKGYDRTRAPAPRGQHMHFNDDDDD
DDD
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgagttctggatatggcggtggaggagggagaagaggcagaagaggaggtcgagggaac
cgagatggaagcagagaaagatgggacagaggaggcggaggaggttcaagaggacacagc
tccgactttgaccaggaccgaggtggtggagggagaggcggacaacgggaccgtcctcct
ccacacctgaagggacgtgagattggtctgtggtacgcaagatacggagccgtgaggagg
aaacaggctgaccgcagatcgcgggcggtggtccagatggatgaggccagagagcagcac
attaccaagctgcttaactctgtccaaaatgatcagcctggtccttggagagatggcatg
gatgcaagagcctctacgtctggcagctggcggagagctgccaatagcagtggtcattgt
tactttgatggggatgtgtctgaagaggaaaagcagaagattgagttcaaatctgaggaa
gaggaggaagaagttactccaggccagaaaaaagcaactcacaaatcacaccgttacttc
tctccagcagttgttaaagatgagcctccagaggcgtgggatgaagaagagcagcagcag
caggaggaggaggaggaggaggaggaggaggaggaggaggagaaagagaaactaagaagg
gaagacaaggacctggagttcttatttcaggaagtagtcagaaacagttcactggatgaa
agcttaaagagggatctgcagaccaaggaatcggatcccaaatacaaagaaatgctgaaa
ttcagggaaaaactaccatcctatgggaaaaaagaggagctggtgcgactgatcaactcg
aaccgcgtcctggtggtgagcggggaaacggggtgcggaaagacaactcaggtcacccag
ttcatcctagatgactacatcaatagaggcgtgggctcaatgtgtcgtgtggtctgcacg
cagccgcgtcgcatcagcgccatctcggtagcagagcgtgtagcagcagagagggcagaa
agtgttgggaatggaaattcttgtggttaccaaattcgcctgcagagccggttaccacgg
agacaaggttcggtcctgtactgtacaacgggcattattcttcagtggcttcgttcagac
ccattgttgtcaagtatcagccacctggtgctggacgagatccacgagaggaacctgcaa
tcggacgttttgctcgtcattgtgaagaacctactcgacttccgagacgacctcaagatc
atcctcatgagtgccacgctcaacgcagagaagttttctaaatattttgacaactgtcaa
ataatccacatccctggtttgacgttcccagtcaaggagttcttacttgaggacattgtg
gagatgaccaggtatcggtcccagaatcgggacagtcgcccctcatggaagaaaggcttt
tggcaggggcgccactccagaccggagaaggaggagaaagaggctgaatataaggagagc
tggcctagttatgcacggacactgcaggacagatactctgacaacaccattgaggcactg
gagacgttggacaacgatgagaagattgacctggagctgatagtggcactgattcgccat
attgtgctcaatgaggaggaaggagcgatcttgatcttcctgcctggctgggccgaaatc
agcagtctcaatgacctgctcactgctcagaagatgttccaatcagaccggttcgtcatc
atccctttgcactccctcatgccaaccgttaatcagacgcaggtgttcaaaaagcctcca
cctggaattcgaaagattgtgattgctaccaatatagctgagaccagcatcaccatagat
gacgttgtttacgtgatagatggaggcaagattaaggagacccactttgacaccaacaac
aacatcagcactatgaccgcagagtgggttagcctggccaatgccaaacagaggaaagga
cgtgccggcagagtgtgtccagggaagtgctaccatctgtacaatggtctcagggccagc
ctgctagatgcctatcaattacccgaaatcatgaggacaccgctggaggagctctgcctg
cagatcaagatattgaagcttgggtctatagctcaattcctggagaaagccctggaccct
ccaactgaagaggccgtcaacctagcgatcaagaacctcatagagctgaatgccctggac
cggtcagagaatctgacagcgctgggtttccacctggctcgtctacctgtggagcctcat
attggcaaactcatcctgtttggagctctgttgggctgcctcgaccccgtactcaccatt
gctgcttcactcagcttcaaagaccctttcttcatccccctgggtaaagagaagatggca
gacatgaggagaaagaccctgtccagaaactccaagagtgaccacctcactattgtcaac
gccttccagggctgggtggaagcgaaacagcgtggcgccaggtatgagagggagtactgc
tgggacaacttcctatctgccaatacactccagatgctgcacaacatgaagggtcagttt
gctgagcatctaatgcgtacaggctttgtcagcagcagggaccccaaagaccctacgtct
aatgtcaactcagacaatgagaagttaatcaaggcagtaattgtagctggtctgtacccg
aaggtggccatgataagaccaactaacagcaaaaagaggccgggggttaaggtgtacacc
caggctgatggaaaggtgtgcatccaccctaaatcagtcaatgctgaagagtctcagttc
aactacacatggctcatctaccacctcaagatgagaacgagcagtatcttcctgtacgac
tgcactgaggtatccccgttctcactgctgttcttcggaggagacatcacaatccagaaa
gacgaggaccaggagaccatcgccgtggaccagtggatcgtcttcagatccccggcacgc
atcgctcacctcgtcaagagtttaaagagagagctggattctctgctggaggagaaagtt
cgtaaccctgctcctgtaaactggcaaaaccgtcagtccaaagactgtgctgtcatcaca
gccatcatagacctcatcaccacccaggagaagcccacaggcagcactaaaggctacgac
agaacgcgggcgcctgcccctagaggacaacacatgcatttcaatgacgacgacgatgac
gacgatgattaa
DBGET
integrated database retrieval system
