Perca flavescens (yellow perch): 114551016
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Entry
114551016 CDS
T07494
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114551016 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114551016 (nhej1)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
114551016 (nhej1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
DUF5428
Motif
Other DBs
NCBI-GeneID:
114551016
NCBI-ProteinID:
XP_028427898
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Position
24:complement(3456434..3473843)
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AA seq
321 aa
AA seq
DB search
MEPGGTSAEVLLQRPWLPVSISGWRLLAKSWFGETSYHILLTDVHCVWEERMDSAALQKR
AQELNRRLRAPVKAFFSHLCEVVRPCLSGRDARADSEAQISLTRQDDGNISIKLKSELAG
LPFYWEFHCTPAPVTVVCVQLVHPLLVMSHLLQRQVEQLGGLLGRKDEEIQDYRENGATL
SRERLQTDVFEEQTYREDFMSKTLPLLCSEQPDAHGFDADLQHLYAAVVARGNTRKRKLS
EERSAEEDQPAAAEEEADVPSSLGGSVTNSNAGEEDAQEDAAGAKMADRPAAVQQSPPLT
SKTAERPSSKPKKKKVVGLFR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggagggacttccgctgaggtcctcctgcagcgtccctggcttcctgtgagc
atcagcggctggcggctcctcgctaagagctggtttggggaaacgtcgtaccacatcctg
ctgacagacgtgcactgtgtgtgggaggagaggatggactctgcagccctccagaagaga
gcacaggagctgaacagacgtttgcgagccccggtcaaagcgttcttctcccacctgtgt
gaagtggtccggccctgcctgtcaggaagggacgcgcgggccgacagcgaggctcagatc
tccctgacgcggcaggacgacggaaacatcagcatcaagctgaagagtgagctggcaggg
ctgcccttctactgggagtttcactgcacccccgcccccgtcactgtggtgtgtgttcag
ctggtgcaccccctgctggtgatgagccacctgctgcagcggcaggtggagcagctcgga
ggactgctggggaggaaggacgaggagatccaggactacagagagaacggagcaacactc
agcagagagcggctgcagacggatgtctttgaggagcaaacctacagagaggacttcatg
tcgaagactcttcctctgctgtgttctgagcagccagacgctcacggcttcgacgccgac
ctccaacacctgtacgcagctgtcgtcgcccgcgggaacacacggaaacgcaaactgtcc
gaggagcgctctgctgaggaggaccaaccagccgccgccgaagaagaagcagacgtcccc
tcgtctttaggtggatccgtcaccaatagtaacgcgggtgaagaggacgcgcaggaagac
gcagccggagccaagatggccgacagacccgccgcagtacaacagtctccaccgctcacg
tccaaaactgcagagcgaccgtcctccaaaccaaagaagaagaaagtcgtgggactgttc
agatga
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