Perca flavescens (yellow perch): 114551152
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Entry
114551152 CDS
T07494
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflv03041
]
114551152
Spliceosome [BR:
pflv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114551152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
RPC5_C
Motif
Other DBs
NCBI-GeneID:
114551152
NCBI-ProteinID:
XP_028428076
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All DBs
Position
24:18711323..18738460
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AA seq
704 aa
AA seq
DB search
MSSRRTDVKENQNSDNLFSKEGVAADATQLPNGSAGGGRKRKRPLEEGNNGHTHSKYRPK
KRKKVTGPILLKNALMQLNELKQGLQYKLLSQTGPVHAPVFAMTVEVNGLLFEGSGPTKK
KAKLNAAEKALRSFVQFPNASEAHMAMGRSLSGHTDFTSDQADFPHMLFNAFETSSPVDD
PFDLASNSSFGIKSPLLPSPIPPLPQHPMGAPLPPHPIGAPLTPAPSAFMSPTSSKNPVM
ILNELRPGLKYDFVSEIGVSHGKNFVMSVTVDAQNFQGSGRNKRMAKVRAAQAALFSLFN
MQLDQAPSRQPIPREGLQLHLPQVLADAVSRLVVEKFSKLTEDFTAPHAQRKVLAGVVMT
TGADVKEAQVICVTTGTKCINGEYMSDRGLALNDCHAEVLARRSLVRFLYSQLEHFLSDQ
EEEQQKSIFSQCEHRRGFRLRENVQFHLYISTSPCGDARIFSPHEAAMEDQGDRHPNRKA
RGQLRTKIESGEGTIPVRSSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGLQGSLMSYF
TEAVYFSSIILGSLYHADHCSRAMYHRITEIQDLPQSFSLNRPLLSGITNAEARQPGKAP
NISMNWALGDPGLEVINATTGKDDLGRPSRLCKHALFSRWMRLHCKLSSSLRIRTVRPGS
YQEAKASAAEYHSAKQTLFRAFHTAGLGTWVKKPVEMDQFALAD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacggcgcacagatgttaaggaaaaccagaactcggacaacctcttctccaaa
gagggggttgcagctgacgctactcagctccccaatgggagtgctgggggtggaaggaaa
aggaaacgtcccttagaggagggcaataacgggcatacccattccaagtacaggcccaag
aagcgtaagaaagtcactgggcccattctgcttaagaatgccctaatgcagctaaatgag
ctcaagcaagggctgcagtacaaactgctctctcagaccgggccggtccatgcgcccgtc
ttcgcgatgaccgtagaggtcaacgggctgctcttcgagggttctggtcctacgaagaag
aaggccaagctgaacgcagcggagaaggccctgcgctccttcgtgcagttccccaacgca
tccgaagcgcacatggccatgggccggtctctgtctggtcacacagacttcacctcggac
caggcggactttccgcacatgctcttcaacgcctttgagacatccagtcccgtagatgac
ccgtttgacctcgcatccaacagctctttcggaatcaagtccccattgctaccctcccct
atcccacctttaccccaacaccctatgggtgcacccttacccccacaccctatcggggca
cccttaaccccagccccatccgccttcatgtcccctacaagcagcaagaaccctgtcatg
atcctgaatgagttgcggccgggcctaaagtatgactttgtgtcagagatcggggtgagc
cacggcaagaactttgtcatgtccgtgaccgtagatgcgcagaacttccagggttctggg
cggaacaaaaggatggccaaggtccgggctgcacaggcggctctgttttctctgtttaac
atgcagctggatcaggctccgtccagacagccgatacccagagaaggactgcagcttcac
ctgccacaggtcctggcagacgccgtctctcgcctggtcgtcgaaaagttcagcaaactc
acagaggacttcacggctccacacgctcaacggaaagttctggctggtgtcgtcatgaca
acgggcgcggatgtgaaagaggctcaggtgatctgcgttaccacgggaacaaagtgcatc
aacggggaatacatgagcgaccgaggtttggccctcaacgactgccacgctgaggttttg
gctcgccgctcgctcgtccggttcctgtactcgcagctggagcatttcctcagtgaccag
gaagaggagcagcagaagtccatcttcagccagtgtgaacacagacgaggttttagactg
agggaaaacgttcagttccacctttacatcagcacatcgccctgcggagacgcccgcatc
ttctctccacatgaagccgccatggaggatcagggcgatagacacccaaacagaaaggcc
cgcgggcagctgcgcactaagatcgagtctggtgaaggaaccatcccagtccgctccagt
aacaccattcagacgtgggacggggttctccagggcgagaggctgctcaccatgtcctgc
agtgacaagatagccaggtggaacgtggttggactgcaaggctctctgatgagctacttc
accgaggccgtctacttctccagcatcatcctgggcagcctgtaccatgcagaccactgc
tccagagccatgtaccacaggatcaccgagatccaggacctgccgcagtccttcagcctc
aacagaccgctgctcagcggaatcacaaacgcggaggctcgtcagccgggaaaagctcct
aacatcagcatgaactgggcgctgggagacccaggcctggaggtgatcaatgccaccacg
gggaaagatgatctgggccgaccctcgcggctctgcaaacacgctctgttcagccgctgg
atgcgcctccactgcaagctgtcgtccagcctgcggatccgaacagtgcgacctggcagc
taccaggaggccaaggcgtcagcggcagagtaccacagcgccaagcagacactcttcaga
gctttccacacagccgggctgggcacctgggtgaagaaacctgtagagatggaccagttt
gctctcgctgactga
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