Perca flavescens (yellow perch): 114551158
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Entry
114551158 CDS
T07494
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114551158
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
114551158
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
114551158
NCBI-ProteinID:
XP_028428093
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All DBs
Position
24:9732155..9747843
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AA seq
956 aa
AA seq
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MGQKDHVEAGTGHLDLGLDLEYLHVAGADRQAGGADVPPAMEEQGESSGNSSTANSPPPA
VVEENAGSDADFELAPSSGAPLADPDGGEGGLTHSKNTHQPLCRTQCVDLGTEGPPEPPP
KPPSDLEHDTPAQSSPSSPCKHPPEPPSDPSSSEPAAEAGGKEYQAKLEFALKLGYFEET
VRLVLSKLGPDTLINDILGELVKLGTKSDSEQPAGSLASTSSSSSSSSSCACSDLLDSQR
SDSPCPSDSLCDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDITVFV
PAWRKEQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGI
IVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVMP
EQKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVATRNQGDTGLVKSH
SVPAGSIEAKKGAQKRQSDPSIRALSYSDAEEKLAKGRAESQKNSMCGSGSVSVPMSSAP
GGPSSSFSLPQDQQSRAVTPHSLPAPSHDLYPHCESPDLSYYSVTRAYSGLSLSSRRSPD
CRFPNDTDMRVGSMGSAGSECGSESSTSCGSSCDSYSERPCPGCPPETLLEDSIHFANPH
SRLYPHHAASNHELCGLHPADYTNIQHSHTSNTGVRSYHLSMARGQSCVHDQPPPEAPPK
RPLYPLPPHLQHQLLAARSSCPGDYHSLPQSNPHPPGSPLGRCLAPTRGESVSDSHLYEH
LSTSHHHHRTKALPSWDSYYRQPALPPSRYEPSAYQSLPDTQQSSWHAPPWAQDGYTQHH
TSHPALHPSPTHYLNPPPPPAHSPHPPHPSGTPLPPYPPHSAHLAVPSHAPPSYMPQHPE
SPAHSRYGDMREKVYVNLCNIFPSELVSRVMARSPHVADPQQLAAAILAEKAQTGY
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcaggaacaggccacctcgacctggggctggatttg
gagtatctccacgtagcaggggccgaccggcaggctggcggtgctgacgtgccccctgct
atggaggagcagggggagagctccggcaacagcagcaccgccaattcccctccaccggct
gtggtggaggaaaatgccgggtctgatgcagatttcgagctggcgccatcttccggcgcc
cccctcgctgacccggatggaggagaaggagggttaactcacagtaagaacacccaccag
ccgctttgtcggacccagtgtgtggacttgggcactgagggtcctcctgagcccccgcct
aaacccccatcggacctcgaacacgacacccctgcgcagtcctcacccagctccccatgt
aagcacccacctgagcctccgtccgatccctcctcatcagagccagcggccgaggctggc
gggaaggagtaccaggctaagctggagtttgccctgaagctgggctactttgaggagaca
gtgcgactggtgctgtccaagcttggccccgacaccctcatcaatgacatactgggagag
ctggtcaaactgggcaccaagtccgacagcgagcagccggctggatcattagcctctacc
tcatcttcttcatcctcctcgtcctcctgtgcctgttcggatttgctggacagccagagg
tcagactcgccctgtccgtccgactctctgtgtgaccaggacaacctgcggccaattgtg
gtggatggcagtaatgtagcgatgagccatggcaacaaggaagtgttttcctgccagggc
atccagctggctgtagactggttcctagagcgtggccatcatgacatcacagtgtttgtg
cctgcgtggaggaaagagcagtcccgccctgacgcccctataacagatcaggagatcttg
cgtcgcctagagaaggaaaagatcctggtcttcactccttcgcggcgtgtccaaggccgg
cgcgtggtttgctacgacgaccgcttcatcgtcaagctggcctatgagtcagacggcatc
atcgtctcaaatgataactaccgagacctggctaatgagaagcctgagtggaagaaattc
atcgatgagcggctgctcatgtattcctttgtcaatgacaaattcatgcccccagatgac
cctcttggtcgtcatggccccagcttagacaacttcctgaggaaaagacctgtcatgcct
gagcagaagaaacagccttgtccatacggaaagaagtgcacttacggccacaagtgtaag
tactaccacccagaaagaggtgctcagcctcagcgtgctgtggctgatgagctgcgtgcc
agtgccaagacgtgtgtcgccacgagaaaccagggggacactgggttggtgaagagccac
agtgtgccagctggcagcattgaggcaaaaaaaggcgcccagaaaaggcagtccgaccca
agcatccgagctctgtcgtacagtgatgctgaggagaagctggcaaaggggagggcggaa
agccagaagaacagtatgtgtggcagtggcagtgtgagtgtacccatgtcctcagcccca
gggggcccttcatccagtttcagccttccccaggaccagcagtccagagcagtgacccct
catagcctaccagcccccagccatgacctttaccctcactgtgagtctccagacttgagc
tactactcagtaacgcgtgcttactctggcctgagtctctcctccagacggagcccagac
tgtcgcttccccaatgacacagacatgcgggtgggctcgatgggttcggccggctccgaa
tgcggcagcgaaagcagcacgagttgcgggagcagctgcgactcgtacagtgagaggccg
tgtcccgggtgccccccagagaccttactggaagacagcatccattttgctaatccccac
agccggctgtatccccaccatgccgcatcgaaccatgaactgtgtggccttcatccggcc
gattacacaaatatccaacacagccacacgtctaatacaggagtgcgtagctaccacctg
agtatggcacgtgggcagagctgtgttcacgatcagcctccaccggaggctcccccaaag
cgccctctgtaccccttgccccctcatctccagcaccagctgctggctgcacgctccagc
tgcccaggcgactaccactcactgccccagtccaaccctcacccccctggctctcctctc
ggccgctgcctggcccccacgcgaggagagagtgtgtcagactcgcatctgtatgaacac
ctctctacatcgcaccatcaccaccggacaaaagctttgcccagctgggactcgtattac
agacagcctgctttgccaccgtccaggtacgagccatctgcctatcagagcctgccagac
acccagcagtcatcctggcacgcccctccctgggcacaggatggctacacccagcaccac
acctcccacccagctctccacccatccccgacacattacttaaaccccccaccgcctcca
gcccactctccgcacccgcctcacccatccggcacccctctcccgccgtacccgcctcac
agcgctcacctggcagtgccctcccacgctcctccctcctacatgccgcagcacccagaa
tcccccgcacacagccgctacggggacatgagggagaaagtgtacgtcaacctgtgcaac
atcttcccctcggagctggtgagccgtgtgatggccaggagcccccacgtcgcagacccc
cagcagctggcagctgctatacttgcagagaaagcccaaacggggtactga
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