Perca flavescens (yellow perch): 114551694
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Entry
114551694 CDS
T07494
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04510
Focal adhesion
pflv04512
ECM-receptor interaction
pflv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114551694
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114551694
09142 Cell motility
04820 Cytoskeleton in muscle cells
114551694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Laminin_I
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
114551694
NCBI-ProteinID:
XP_028428463
LinkDB
All DBs
Position
Unknown
AA seq
1760 aa
AA seq
DB search
MKMKIMMKMIKFVVLLLLMERAAAQQRGLFPAILNLASNAVISSNATCGDPEPEVYCKLV
EHVPGRRIKNPHCPKCDASSLLAKERHPITNAIDGTNQWWQSPSIKNGRQFHWITITLDL
KQIFQVAYIIIKAANSPRPGNWVLERSLDGVTFDPWQFYAISGSECLSHYNVTPRLGPPT
YKRDTEVICTSYYSRLNPLEQGEIHTSLINGRPGADDLTNELLNFTSARYIRLRLQRIRT
LNADLMTLSTRDPREIDPIVTRRYYYSIKDISVGGMCICYGHAQSCPLDPVTKKMQCVCE
HNTCGESCNECCPGYHQQPWQPGTISEGNTCEKCNCHNKASDCVYNQTVSDWSMSLNAAG
VRRGGGVCSSCQQNTXGVNCENCRDGYYRPSEVSPYSDSPCVDCDCDLRGSESSVCSRDD
TQPGVSAGQCVCREGFSGLRCERCAFGYRDFPLCSRCECSLSGSINTDPCSTCTCKVNVM
GAHCDLCKPGFYNLQAGNPLGCSDCFCFGVSDVCESSDWKTAQVHHTGRLAPPLPPSNHC
LLSTATTSPSPTTPLAPPTNTRAVGGGARGFLGNKLGSYGGFLTFSLGYDVPLDNEDHAL
RALADIIIQGNGRSLRLAPPLLLFLSELAERSVVVVIVPQSFLDEETGIHVTHDALLSAL
SNVTSLRVRVHLNASADGPIRLSSVSLDVADSAAVSGVPAVAVETCECPWGYSGTSCEAC
LPGFYRLGGVLFGGNCLQCECNDHAAQCDVNGVCLGCSHNTSGPHCDQCLPGFYGDATEG
TASDCRVCACPLTETSNSFSPTCVLEESGQVLCDRCQDGYTGARCERCASGFHGNPQVVG
GACERCECNGNVDVSEAGHCHTVTGECLRCLGNTAGAHCEVCQPGYYGDAVHAKDCQACG
CDVSGARSSVCDVTTGQCLCRENVTGHSCNRCQSGFFGLQSGRGCQPCSCSQSGSLSESC
DEEGRCQCVEGVAGDTCDRCSHGYFSFPAIGCTACTCEHTRGNCDPESGECICPPHTEGV
TCDRCEDGYWGHDPITGCKPCSCSAAGSSAPRCELTNGQCLCREGFSGRSCDQCSPGYHG
YPECSACGCDVTGTDEKFCNTTLGVCDCRDNGECVCKLGVSGRCCEECVSGWFGLSAESP
AGCSQCFCSGLSSACEEQGGLLRVPITLADSAAELSLADSAAELSLVSQSNLQGVVSGVY
QQGGDTLLDTRHLNSSRLTGPLYWKLPPHYQGPQLLAYGGLLSYIITFYAEDGSGLSNRE
PQILMRGGAMRKLVIYTDMVAPGNGVRTQHDIRMTEVQLISNITMETAVEAGLDEEGGVA
RLIESCICPPGYTGLSCQECAAGFFRQPVSELSSKSQKSLLVHPCVRCRCSDHSERCDPE
SGACQGCEHHTSGPSCERCAPGYYGNVSGSISDCSLCACPLRDNSFSPSCVPEGAFGDFR
CTACQTGYEGRYCERCSVGYYGNPSVAGGVCRRCSCSGRGSLHPLCDALTGQCECKAGVK
GHTCDRCEERHVLQEEECVSCDDECTGVLLDDLEQIHNDFLSVNLSAVAMAPYRQLVLLE
NTTRDIQAAFPENGSVALRLSGVEDELSHVTSDLSALAQQVSRLSNDLEKVGVSTNQSLS
QGALLLEGISSLQEIIQKLQREAGLLNKSAVEQLDSANQKALLEEVTAMLETLRAVNMSA
AGAAANQELRQSESLLGSLREDFLSGTAPVDDRLRPLAAHLSVVMETLQQAETQLSDSAQ
RNTQTHTLLDAAHTQLQHYQ
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaagataatgatgaagatgatcaagtttgtggtgttgttgctgctgatggag
cgagctgcagctcagcagagagggctgttcccggccatcctgaacctggccagtaacgcg
gtgattagcagtaatgctacgtgtggagaccccgagccggaggtctactgtaagctggtg
gaacacgtcccgggacgacgcatcaagaacccccactgccccaaatgtgatgctagctcc
ctgctagctaaagaacgtcatccaatcacaaacgccatcgacgggaccaatcagtggtgg
cagagtcccagcatcaagaacggacgccagtttcactggatcaccatcacgctggacctc
aaacagatctttcaggtcgcctacatcatcatcaaggcagctaactctcctcgaccaggt
aactgggtgctggagcgctccctggatggtgtgacctttgacccctggcagttctacgcc
atcagcggctctgagtgcctgtctcactacaacgtgacgccgagactcggcccccccacc
tacaagagagacacagaggtcatctgcacctcctactactccagactcaacccactggag
cagggagagatccacacctccctgattaatggccgccccggtgctgatgatctgaccaat
gagctgctgaacttcacgtcagctcgttacatcagactccggctgcagcgaatcagaacg
ctcaacgctgacctcatgacgctgagcacccgggacccccgagagatagaccccatcgtc
accaggaggtactattactccatcaaagacatctccgtggggggcatgtgcatctgttat
ggccacgcccagagctgcccgctggaccccgtcaccaagaaaatgcagtgtgtgtgtgaa
cacaacacgtgtggggagagctgtaacgagtgttgccccggttaccaccagcagccatgg
caaccaggaaccatctcagagggaaacacctgtgagaagtgtaactgtcacaacaaggcg
tctgactgtgtatataaccagactgtctctgattggtcgatgagtctgaacgctgccggc
gtgcgtcgggggggcggagtctgttccagctgtcagcagaacacgnngggggtcaactgt
gagaactgcagggacgggtactacaggccctcagaggtgtctccatactctgactctccc
tgtgtggactgtgattgtgatctgagaggatctgagtcttcagtctgcagcagagacgac
acacagccaggggtgtctgcaggccagtgtgtgtgtagagaaggcttctcaggtctgcgg
tgtgagcgctgtgcgtttggctacagagacttccctctgtgttcccgctgtgagtgcagc
ctgtcaggcagcatcaacactgacccctgcagcacctgcacctgcaaggtgaacgtgatg
ggggctcactgtgatctgtgtaaacctggtttctacaacctgcaggccgggaatcctctc
ggctgctccgactgcttctgcttcggagtctcggacgtctgtgagagttcagactggaag
acagcacaggtgcatcatacaggccgcttggctccgccccttccgccctccaatcactgc
ctgttgtccacggcaacgacctccccatccccaacaactcctctggccccgcccaccaac
acgcgtgctgtcgggggcggcgcccgcggtttcctcggcaacaagctggggtcttacgga
ggcttcctgaccttctctctgggttatgacgtcccattggataatgaagaccacgccctc
cgcgccctcgctgacatcatcatccagggaaacgggcgatctctccgtctcgccccccct
ctcctcctcttcctgtccgagctggccgagcgatcggttgttgtggtgatcgtcccgcag
agtttcctggacgaggagacgggcatccacgttacccacgatgcactgctgtcggcgctc
agcaacgtgacctcactgagggtcagagttcatctcaacgcctccgcagacggacccata
cgtctcagctccgtgtctctggacgttgctgactctgctgcagtttctggcgtcccggcg
gttgccgtagagacgtgtgagtgtccgtggggttacagcggcacttcctgtgaggcgtgt
ctcccagggttctaccggctggggggggtcctgtttggggggaactgtctccagtgtgag
tgtaacgaccacgcagcccaatgtgacgtcaacggagtctgtctgggttgttcccataac
accagcggtcctcactgtgatcagtgtcttcctggtttctacggcgacgccaccgagggg
acggcgtccgactgccgggtgtgtgcgtgtcctctgacggagacgtccaacagcttcagt
cctacctgtgtgttggaggagtctggtcaggtgttgtgtgacagatgtcaggacggttac
acaggagctcgctgtgagaggtgtgccagtggtttccatggtaacccccaggtggtgggc
ggggcctgtgagcgctgtgagtgtaacggtaacgtggacgtcagcgaggcgggacactgc
cacaccgtcaccggggagtgtctgcgttgcctcggcaacacggccggagcacactgcgag
gtctgtcagccgggttactatggagacgccgtgcacgccaaggactgtcaggcgtgcggc
tgtgatgtcagcggcgcccggtccagtgtgtgtgatgtcacaacgggtcagtgtctgtgc
agagaaaacgtgacgggacactcttgtaaccgctgccagtctgggtttttcgggctgcag
agcggccgggggtgtcagccctgtagctgcagccaatcaggatctctctctgagtcatgt
gacgaggaggggcggtgccagtgtgtggagggcgtggccggagacacgtgtgaccgctgt
agccatggttacttcagtttccccgccatcggctgcacagcatgcacctgtgaacacacc
agagggaactgtgacccggagagcggcgagtgcatctgccccccccacacggagggagtc
acctgcgacaggtgtgaggacggttactggggtcacgaccccatcacaggctgcaagccg
tgtagctgcagcgcagcgggaagctccgcccctcggtgtgagctgaccaatggacagtgt
ctctgcagagagggcttctctggcaggtcatgtgaccagtgttcccccggttaccacggt
tacccagaatgctcggcgtgcggctgcgacgtgacgggaacggacgagaagttctgcaac
accacactgggagtgtgtgactgtcgagacaacggggagtgtgtgtgcaagctgggtgtg
tctggacggtgctgtgaggagtgtgtctctggttggttcggcctatcagcagagagtcct
gccggctgctctcagtgtttctgttcaggactcagctcggcctgcgaggagcagggaggc
ctgctcagagtaccgatcaccctggctgactctgctgctgagctgtcattggctgactct
gctgctgagctgtcattggtcagccagtctaacctgcagggtgtagtgtctggagtctac
cagcagggcggcgacacgctgttggacacccggcacctcaacagcagccggctgaccggc
ccgctctactggaagctccccccccactaccaaggcccccagctgctggcgtacggcggc
ctgctgtcttacatcatcactttctacgctgaggacggctcggggctgtccaatcgggag
cctcagatcctgatgaggggcggggccatgaggaagctggtcatatacacggacatggtc
gcccctggcaacggcgtcaggactcagcatgacatcaggatgacagaggtacagctgatc
tctaacatcaccatggagacagcagtggaggcggggctagatgaggaaggaggcgtggcc
agactgattgagtcctgcatctgtccaccgggatacacgggactgtcctgtcaggagtgt
gctgcaggattcttccggcagcctgtgtctgagttgtcgtctaagagtcagaagtctctg
ctggttcatccgtgtgttcgatgccgctgcagcgaccacagcgagcgctgcgacccggag
tctggagcctgtcagggctgtgagcaccacaccagcgggccgagctgcgagcgctgtgcc
ccggggtattatgggaacgtcagtggttcgatcagcgactgctcgctgtgtgcctgcccc
ctgcgggacaacagtttcagtcccagctgtgtgccagagggagcgtttggggattttcgc
tgcacagcctgccagacgggatacgaggggagatactgcgagaggtgttcggttggttac
tatgggaacccgtcggtggcgggcggcgtgtgtcggcgctgcagctgcagtgggcggggc
tcgctgcacccgctgtgtgacgcgctgacgggacagtgtgagtgtaaggccggggtcaaa
ggtcacacatgtgaccgctgtgaggagagacacgtcctgcaggaagaggagtgtgtgtcg
tgtgatgacgagtgtaccggcgttctattggacgatctggaacaaatacacaacgacttc
ctgtctgtcaacctgagcgctgttgccatggcaccgtaccgccagctggtgctgctggag
aacacgacaagagacatccaggcggcgttcccagagaacggctcggtggctctgcgtctg
tccggagtggaggatgaactcagtcatgtgacctctgacctcagcgctctggcacagcag
gtctcccgtctgtctaacgacctggagaaagtgggcgtgtccaccaaccagagcctttcc
cagggtgcattgctgctggaaggaatcagcagccttcaggaaatcatccagaagcttcag
agggaggcggggcttctgaacaagagcgccgtggagcagctggattcagccaatcagaag
gctctgctggaggaggtgaccgccatgttggaaaccctccgcgccgtcaacatgtcggcc
gccggggcagcggccaatcaggagctccgccaatcggagtcgcttctcggctcgctgcgg
gaggacttcctgtccggcacggcgccggtggacgacaggctccgccccctcgccgcacac
ctctccgtcgtcatggaaacgctgcaacaggcagagacacagctgagcgacagcgcacaa
cgaaacacacaaacacacacactgctggacgccgcacacactcagctgcaacactaccag
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