Perca flavescens (yellow perch): 114552335
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Entry
114552335 CDS
T07494
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34 isoform X1
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pflv03016
]
114552335 (tsen34)
Enzymes [BR:
pflv01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
114552335 (tsen34)
Transfer RNA biogenesis [BR:
pflv03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
114552335 (tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
114552335
NCBI-ProteinID:
XP_028428825
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All DBs
Position
3:42874554..42909138
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AA seq
288 aa
AA seq
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MDEPPPRTEATSVSDSSPLAVSVCDSSPLLWRVEDLRSVRAQGLVGALLGALPRTPRQNV
RLGRPLLLLPEEERLLTERHVGPPTATPADNQDGGVELQVQQYQEAQQRSYEEQSVLALE
DRKSALLRAMTSSPTESGDESLRCRLAALESSFTFPRSAMAVQLSTARAGLSYCADTRDF
LRADRPIRAQDEPRRATRYQVFRDLRGRGFYLTSAGKFGGDFLVYPGDPLRFHAHFIAVC
VSLDESLSLLDVLAVSRLGSNVKKTVLLCSPGPAGRVAYTSLQWSGMV
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcctccgcctcgaaccgaggccaccagcgtgagtgactcctcccccctggcg
gtcagtgtgtgtgactcctcccccctgctgtggagggtggaggacctgcgctccgtgcgg
gctcagggcctggtgggggcgctgctgggcgcactgccccggacgccccgccagaacgtg
cggctgggacgcccgctgctgctgctgccagaggaggagcggctgctgaccgaacgccat
gtcggcccccccaccgctacacccgctgataaccaggatggaggggtggagctacaggtg
cagcagtaccaggaggcccagcagcggagctacgaggagcagagtgtcctcgctctggaa
gacaggaagtcagcgctactccgagccatgacatcatcacccacagagtccggagacgag
tccctgcggtgccgtctggcggcgttggaaagcagcttcacctttcctcgctcggcaatg
gcggtgcagctcagcacggcgagggcggggctttcctactgtgccgacaccagggacttc
ctgcgggccgaccggccaatcagagcgcaggatgagccgcgccgtgccaccaggtaccag
gtgttcagagacctgagggggcggggcttctacctgacctctgccgggaagtttggagga
gacttcctggtttatccgggggatcctctccgtttccatgcccacttcatagccgtgtgt
gtgtctctggatgagtccctgagtctgctggacgtcctggccgtgtctcgtctgggctcc
aacgtcaagaagacggtgctgctgtgttctccggggccggccggccgcgtggcgtacacc
tcgctgcagtggagcggcatggtgtag
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