Perca flavescens (yellow perch): 114552350
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Entry
114552350 CDS
T07494
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03440
Homologous recombination
pflv04068
FoxO signaling pathway
pflv04110
Cell cycle
pflv04115
p53 signaling pathway
pflv04210
Apoptosis
pflv04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114552350 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
114552350 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114552350 (atm)
04210 Apoptosis
114552350 (atm)
04115 p53 signaling pathway
114552350 (atm)
04218 Cellular senescence
114552350 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pflv01001
]
114552350 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pflv03032
]
114552350 (atm)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114552350 (atm)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114552350 (atm)
Enzymes [BR:
pflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
114552350 (atm)
Protein kinases [BR:
pflv01001
]
Serine/threonine kinases: Other
PIKK family [OT]
114552350 (atm)
DNA replication proteins [BR:
pflv03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
114552350 (atm)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
114552350 (atm)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
Check point factors
Other check point factors
114552350 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT_ATR
Motif
Other DBs
NCBI-GeneID:
114552350
NCBI-ProteinID:
XP_028428852
LinkDB
All DBs
Position
3:23931475..23962707
Genome browser
AA seq
3091 aa
AA seq
DB search
MSLALHELLVCCKGLENDKATERKKEAERFRRLIRTPEVVQELDRTSGPKAKGSKQLTWD
AVFRFLQRYVQKETESMQSSKSVTATTLATRKKKMAEMCSLIKYFIRYANKRGPRLKCSE
MLKHVMDVLQNSYSCSSYGEDYSSLLLKDILSVRKYWCDIPPQQWQNILDLYCNLFNTSS
KSINRVLVTRVIHTVVQGCCMQTDGFNNYLFSFFSKALLNARQEKHLTVLEHLVSGLNIF
LRSAAMNCRMRVCHLGEELLPSILYVWADMRPSTALKEEIVEFFNLQICVHHPKGAKTQD
TGAHAEDWTRWRGLLYNLYDALIREISQLGSRGKYITGTRHIAVKDNLIELTADICHQLF
SDDNATHVLEVTQASLRATHMGSPTNGAASKRRRIQLGWEVLRDHLQPQHNDFDVIPWLQ
ITAVLTFKYPSMVPSQELIPLLSVLYQLLAEQRKGERGPYVLRCLREVAQCQARCPERAQ
VHRTELARMWGRVWALALRGVSSPQTEALSLDLLSSIVHGGLINMDREFWKLFSGSACKP
STGAALCLAQALLKCSAPKNIISSSGWDYVGVTEGSASPNLKETLVGWLLMTDQSEEMED
SSRPHPIICRDFPFNLVANILVSLTLKDTRTGLKFLLGTKGVESAFFQDQTSSKAKDLEE
IERLYLQFSFNTLPSAMQKTDESVTTASSGGQFAAVPCVRKRLEQSLLCVADNLLNCYSP
DSQSTPPECLVRCLSLLTGVLASYVSTRYLTEEEACRSQLFTKAKALAQDFSGFVSGVKV
KMTEEGTMSTLRSVMKLCTQSASRKNKDNVHPISSSLFIMILPASLLSELAEICKLLLSS
VSKRVSVVDEDDHMDDDWDVTRTQQGDDIDLFDEGEESHSSTNGTHRQKGDNSDTSCGPG
ARSLLAEDYLAQQDLALLAVLEFLCECGSIQPVHGLLFKPQEVRRRLLQLVEQMDFNKAL
HLNMYLVLLKKLPAEDSLSPEEFDSLLRPLADLCSLYRQDQEICAAVLLGLLPSIKSLGK
THHVPEEMRHVQGSLLKVVSGFCFLSQTGKCMAAVRAALVRCLVALLEADPCCKWAFLSI
RGPDREEDRPVSVILPSHLADAHHQVRMLVAMSVERLFLELRPEHPDKRNMLPLKHQQAA
FENVYLKAQEGMKLQRSSSSEDQRDESFNRKATLLKSLSVVLCCSPVCEKQSLFALFQSY
KENSIEEQLIKKMLCSVSRALGYRSGKTLVTSHLYYLVAEWLAQRQSDDRYTLGSFPYTL
LDHDTVKDFYKSSYQVLIPHLVFLDDFEQVKSIGRYLEKDWKELLANCFPKIMVNILPYF
ALSGQDSQVAQQREKAHKVYDLLKDANCLGKQQIDNLIHSNLADIVVELLMTLYEGSGAE
GDRGDLKRFTGELDPVPNPPYFSSYVIKATLDYLSMCHSANHKTLVAILSKTPISIQRIL
LAVCERAAETTNSYERHRILLMYHLFVSLLLREVKDGLGGAWAFVLRDIIYTLIHYINSR
PVHCDEVSNRSLSLCCDLLTAVCRAALQFCDDALDCHLQVIVGTLTVLVSSRPTISQQVL
SLLQFLVIENQQKLKGAISRLEPFPDLREFKELRSVQHKLKHNAGTFTLRQEIAHFLSVT
SCDSLPLTRLEGLKELTRQLHDNKGQIRELLKECQAEPTDSVLVKLVLSLLQLCKLAVNH
QGGANILEAAGSCLGELGPVDFSTIALLHGRDPLYEKAVSLFTSTESQCLYIILNCMNDA
LTQQRIEVRQAAAQCVMSILATQSGVDFWEQHKDNRDPMLAYLNPFRKAKKKGEAVSAEV
SSEAREKLESQEFWIPQAGSHEAWLKALCTALLDSGGVRSEALLLSRPLCLVRVDCCQRL
LPLIIHSILLDDSNGSWRELLSSHIQDFFSFCSRSAQASSRSATPLNSDSESDAASQGLY
DKTSLRTMLAVLDYLRHQQRPLDADSNSCGTVCDSNFWLELNYLEVAKAAQSCSAHFTAL
LYSEIYVDKIKANMEDSRRTKSRVTRKINFEENSQNFTISSLTEKSREDTNISLQELLIE
VYRSIGEPDSLYGCGGETMTSPLTRIRTYEHEAMWGKALTSYDLHSTLPEVARQVGIVEG
LQNFGLCSILATYMRGLESEGVEWGAELRELRFQAAWRNTQWDCELLERSEKSKPGFHES
VFCSLQALRDKEFSIFDETMKQARGADVEELCRGSLEAVSSLYPALRNLQSIRELESVKQ
LFSGPFSDVTLTEVCSQWRQHSQLLADSDFALVEPILAVRSVAQHTLMSTVGNPDSTQYL
SSVLTDHLMELCRLARKAGNTQLAERAVFQLKQHGGGGSWASSPVLSWQLEEAQVFWAKG
EQGLALGLLREMIHNLEEKVDLNPALVPVYTECLRLCGNWLAETCLESPGVILEKYLERA
VEVIEQESGVQDSRLQSQRTEAFLSLARFSDAQYQSIDKYMNSSEFENKQALLEKAKEEV
DLMKERKVTSNRYTIKVQRELELDEKALSNLQADRQRFLCKAVENYIQCLEQGEEHDTWV
FRLASLWLENADVKAVNVMMKKGVKKIPSYKFLPLMYQLAARMGTKMVTGVTEDTGFHDV
LIDLIYRASLEHPHHTLFIILALVNANKDENFCKTRLSKSAPRQPSPFDLERSDVAQKII
SAIRKKRGEMIRGIERLCDAYITLAYMDASKHKTEKKAIPIPADQPIMQIKDLDEVVIPT
MEIKVDPSGCYDNLVTVRSFLPQYHLAGGVNLPKIIDCVGSDGKSRRQLVKGQDDLRQDA
VMQQVFSMCSMLLQRNTDTRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGEFLVDPNKG
AHKRFRPRDWTNLACRRKMMEAQKLAFDEKLQAYSEVCKNFRPVFRYFCMERFLDPAVWM
EKRLAYTRSVATSSIVSYIVGLGDRHIQNILVDEQTAELVHIDLGVAFEQGKILPTPETV
PFRLSRDIVDGMGITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMNPLK
AFYLQHDEQQELNATLSSTMGGDDVDNHRKSSDSQSFNKVAERVLLRLQEKLKGVEEGTV
LSVGGQVNLLIQQAMDPKNLSRLFPGWQAWV
NT seq
9276 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggctcttcatgaactcctggtctgctgcaaggggctggagaatgataaagct
acagagaggaagaaagaagctgaacgcttcagacgactcattcgaactccagaggttgtg
caggagttggatcgtacatccggacctaaagctaaaggctccaagcaactcacatgggat
gctgttttcagatttctgcagcgttatgtccagaaggagacagaaagcatgcaatcaagc
aaatctgtcacggcaactacgctggccacacggaaaaagaagatggctgaaatgtgtagc
ttaatcaaatacttcattcgctacgcaaacaaacgcgggcctcgtctaaagtgcagtgag
atgctaaaacatgtgatggacgtcctgcagaattcatacagctgttcatcctatggagaa
gattatagcagcctccttttaaaggacatcctctctgtccgcaagtactggtgtgacatc
cctccacagcagtggcaaaatattttggacttgtactgcaacttgttcaacacttcatcc
aagtccatcaaccgtgttttggtgaccagggtgatccacacggtggtgcagggctgctgc
atgcagactgatggattcaacaactatttgttcagcttcttctccaaagcactgctaaat
gccaggcaggagaaacacttgactgttttggagcacctcgtctctggtctcaacatcttc
ttgagatctgcggccatgaactgtcggatgagggtgtgtcacctgggagaggagctgctg
ccttctatactgtatgtctgggcggatatgaggcccagcactgctctcaaagaggagatt
gtggagttctttaacctgcagatttgtgttcaccacccaaaaggagccaagacacaggat
acaggtgctcatgctgaggactggaccaggtggcggggtctgctgtacaacctatatgac
gccttaatcagagaaattagccagctaggcagcagagggaagtacatcacgggtacccga
cacattgctgtcaaagacaatctcattgagctcacagctgacatctgtcatcagctgttc
agtgatgacaatgccacccatgttttggaggttacccaggcctccctcagagccacccac
atgggcagtcccaccaatggagcagccagcaagcgacggcgcatccaactaggctgggag
gtcctccgggaccatctgcagcctcagcataatgactttgatgtcataccatggctgcag
atcactgcagtgctgacatttaagtacccgtccatggtgcccagccaggagctaatcccg
ctgctgtccgtgttgtaccagctcctggcagagcagcggaaaggagagagggggccgtac
gtgctgcgctgtctgagggaggtggcccagtgccaggcccgctgcccagaaagggcccaa
gtccacaggacggagctggcccggatgtggggtcgggtgtgggccctggcactgcgaggg
gtcagctcgccacaaaccgaggccctcagcctagacctgcttagctccattgtccacggt
ggactgatcaatatggacagagaattctggaagctcttctctggatcagcatgtaaacca
tctacgggtgctgctctctgtctagcccaggccctattaaagtgttcagcccctaaaaat
atcatctccagctcaggctgggactatgtgggggtcacagagggatctgcatcgcctaac
ctgaaggagaccctcgtaggctggctgctgatgactgatcagagcgaggagatggaggat
agctccagacctcaccctatcatttgcagagactttccattcaatctagtagcaaacatc
ctggtctccctgaccttgaaagacacaagaactggcctgaagtttctgctgggtactaaa
ggagtagaaagtgccttttttcaagaccaaacctcatccaaagccaaagacctggaagag
atcgagaggctttacttgcagttcagcttcaacacgctgccctcagcgatgcaaaagact
gacgagtcagtgacgacggcttcatctggaggccaatttgcagccgttccctgcgtcaga
aagaggttggagcaatccctgctttgtgtggctgacaacctgctcaactgctactctcct
gattctcagtccactcctccagagtgtctggtgcgctgtttgagtctgctgactggtgtt
ctagcaagttacgtgtccactaggtatctgactgaggaggaggcctgccgctcacagctc
ttcactaaagccaaggccctggctcaggacttcagcggttttgtttccggtgtgaaagtg
aaaatgaccgaggaaggaaccatgagcacactgagatccgtcatgaagctctgcacacag
tcagccagcagaaaaaacaaggataatgttcatcctatctcctccagtctgttcattatg
attctgccggctagtctcctcagtgaactggctgagatctgcaaactcttgttaagcagt
gtttctaagagagtcagtgttgtggatgaagacgatcatatggatgatgactgggacgtg
accagaactcaacaaggagacgacattgacttgtttgatgagggcgaagagtcccacagc
agcaccaatgggacccacagacagaagggagacaacagtgacacttcctgtgggccaggt
gcaagaagtctgttagcagaagattatctggcccaacaggacctggctctccttgcagtc
ttggagttcctgtgtgagtgcggctccatccagcccgtccacggtctgctttttaaaccg
caggaggtgcggcgcaggctgctgcagttggttgagcagatggactttaacaaagccctg
cacctcaacatgtatctcgtcctgttgaagaagcttcctgctgaggactcgctctctccg
gaggaatttgattcactgcttcgtcctctagcggacctgtgttctctgtaccgtcaggac
caagagatctgtgctgctgttctgctgggtttgttaccctccatcaagagcctcgggaaa
acccaccacgtgccagaggagatgagacatgttcagggatctctgctaaaagtggtgtcg
ggattctgtttcctgagccaaacggggaaatgcatggcagctgtacgagctgctttagtg
agatgtctggttgccttgctggaggctgatccgtgttgtaagtgggcattcttaagtatc
agagggcctgacagagaggaagatcgcccagtgtctgtcatccttccatctcacctcgca
gatgcccaccaccaagtccgcatgctggtagctatgtcagtggagaggttgtttctggag
ctaagacccgagcatccagataagagaaacatgctgccgcttaaacaccagcaggcggct
tttgagaatgtttacctgaaggctcaggaaggaatgaagctccaaagaagcagctcttca
gaggaccagcgcgacgagtcctttaaccgcaaggccaccctgttgaagagtttgtctgtt
gtgctgtgttgtagcccagtctgtgaaaagcagtctctgtttgccctcttccagtcctac
aaggagaacagtatagaggaacagctcatcaaaaagatgctgtgcagtgtatccagagcg
ctgggctacaggagcgggaaaacacttgtcacttctcacctgtactacttggtagctgag
tggctcgcgcagagacagtctgatgatcgctacactcttggatcttttccctacaccctc
ctggaccacgacacagtcaaagatttctataagtcttcctaccaggtcttgatcccccac
ctggttttccttgatgactttgagcaggtgaagtctattggcaggtatcttgagaaggac
tggaaagagttattggccaactgttttcccaagatcatggtcaacatcctgccatacttt
gccttgtctggccaggattcacaggtcgcacagcagagagagaaggcccacaaagtgtac
gacctgctcaaagatgccaactgtctgggcaaacagcaaatcgacaacctgatccacagt
aacctggcggacatagtggtggaactgctgatgactctgtatgaaggaagtggagctgaa
ggggacagaggagacctgaaacgctttacaggggaactggaccctgtaccaaacccacca
tacttcagctcctatgtcattaaagctacactggactacctcagcatgtgccacagtgca
aaccacaaaactttggtagccattctgtcaaaaactccgatttctatccagaggattctg
ctggcggtgtgtgaaagagcagcagagacgaccaacagctatgaacgtcatcgcatcctc
ctcatgtatcacctgtttgtcagcctgctgctcagagaggtgaaggacggcctgggagga
gcctgggcctttgtcctcagagacataatctacacactcattcactatatcaacagcaga
ccagttcactgtgatgaggtttctaaccgaagcctctccctgtgctgtgacctgttgacc
gctgtgtgtcgggcagctctgcagttctgtgatgatgctctagattgccacttacaggtc
atcgttgggactctcacagttctggtgtcgagccggcccaccatctcacagcaggtgctt
agtctgttgcagtttctcgtgatagaaaatcaacagaagttaaaaggagccatcagcagg
ttggaaccttttcctgacctccgtgaattcaaagagctgcggtctgtacagcataagctc
aaacataacgctgggacctttacactgagacaggagatagcccacttcctgtcagtgacg
tcctgtgactccttacctctgaccagactggaggggctgaaggagctcaccagacagctg
catgacaacaagggacagatcagagagctgctcaaagagtgccaagctgaacccactgac
agtgtgctggtgaagctggttctcagtctgctgcagctctgtaagctagcagtcaaccac
cagggaggagccaacattttagaggcagcaggcagctgtctgggagaactgggtcctgtg
gatttctccaccatcgctctacttcatggcagagaccccctttatgaaaaggctgtgtct
ctcttcacctccactgagtcgcagtgtctttacatcatcctcaactgcatgaatgatgca
ctcactcaacagcgtattgaggtgaggcaggcagccgctcagtgtgtgatgagcatcctc
gccactcagtctggagtcgacttctgggagcaacacaaagacaacagagaccccatgctg
gcctacctcaatccttttagaaaggccaagaaaaagggggaagctgtgagtgctgaggtg
agttcggaggccagggagaagctggagagtcaggagttttggattccgcaggcgggcagc
cacgaagcctggctgaaggctctatgcaccgccctgctcgacagcggaggagtcaggagt
gaagctctgctgctgtcacggccattgtgtctggtgagggtggactgctgtcaaaggctg
ctgcccctcatcatccactccatccttctggatgactctaatggttcgtggagggagctg
ctctcctcccacattcaggacttcttcagcttttgttcaagaagcgctcaggcctccagt
cgttctgcaacacctctcaactctgactctgagtcagacgctgccagccagggcttgtac
gacaagacctcacttcgtaccatgcttgctgttcttgactatctgagacaccaacagaga
ccactggacgctgatagcaactcctgtggcacagtgtgcgactcaaacttctggctggag
ctgaactatctggaggtggccaaagctgctcagtcctgctcagcacatttcaccgctctg
ctgtactctgagatctatgtggacaagatcaaagctaacatggaggacagtcgaagaacc
aagtccagagtgacacgtaagataaattttgaagagaacagccagaacttcaccatctcc
agcctgactgagaagagtagggaggacactaatatcagcctgcaggagctgctgattgag
gtgtatcgcagcattggagagcctgatagtctgtatggctgcggcggggagacgatgacc
agtccgctgacaaggattcgaacctatgaacatgaggctatgtgggggaaggccctgact
tcatacgaccttcactctactctgcctgaagtcgctcgacaagtgggaattgtggagggc
ctgcagaactttggtctgtgcagcatccttgccacctacatgaggggtctggagagtgaa
ggggtggagtggggagccgagctgagagagcttcgcttccaagccgcctggaggaacaca
cagtgggactgtgagctgttggagaggagtgagaaatccaaaccaggcttccacgaatca
gtgttttgttccttgcaagcgctgagggacaaagagttctccatatttgatgaaactatg
aaacaggccaggggtgcagatgtggaggagctgtgcagaggcagtctagaggctgtgtct
tctctctacccggctctcaggaacctgcagagcatcagggagctggagagtgttaaacag
ctcttttctgggcccttctcagatgtgactctgacagaagtttgcagccagtggcgacag
cactcccagctgctcgctgacagtgactttgctttggtggagcccattctggctgtccgc
tctgtggcccagcacaccctgatgtccacggtgggaaaccccgacagcacccagtacctc
agctctgtgctcactgaccacctcatggagctctgccggttggctcgcaaggctgggaat
acacagctggcagagcgggcagtcttccagttgaagcagcatggtggtggagggtcctgg
gcatcatcccctgtgttgtcatggcaactggaagaagcccaggtgttctgggcaaaggga
gagcagggactggcgctgggcctgctaagagagatgatacacaaccttgaagaaaaggtg
gacttgaatcctgctctggtcccggtctacactgagtgcctcaggctgtgtggtaactgg
ctggctgagacctgcctggaaagccccggagtaatactggagaagtatctggagagggcc
gtggaggtgatcgagcaggaatcaggagttcaggactccaggctgcagagtcagcggact
gaggccttcctgtcactggcccgcttctctgacgctcagtaccagagcatcgacaaatac
atgaactcctctgagtttgagaacaagcaggcgctgctggagaaggccaaagaagaagtg
gacttgatgaaggagcgtaaagtgacgtccaacaggtacacaataaaggtgcagagagag
ctagagctggatgagaaggccctgtccaacctgcaggcagacagacagcgtttcctgtgt
aaggcggtggagaattacatccagtgtctggagcaaggtgaggagcacgacacctgggtg
ttccgcctggcttcactctggctggagaatgccgacgttaaggccgtaaacgtcatgatg
aagaaaggggtgaagaagattccttcctacaagtttctgcctctcatgtatcagttggca
gctcgcatgggaaccaagatggtaactggcgtcactgaggacacaggcttccatgatgtc
ctcatcgatctaatctaccgagcatctctggagcaccctcaccacacactcttcatcatc
cttgccctggtgaacgccaacaaagacgaaaacttttgcaagacccggctgtccaagagc
gctccacggcagccctcaccatttgacctggagcgttcagatgtggcccagaagataatc
agtgcgatcaggaaaaagagaggcgagatgatccgagggatcgagcgtctgtgtgatgcc
tacatcactctggcttatatggacgccagcaaacacaagaccgagaagaaggctattccc
atccctgctgatcagcccatcatgcaaatcaaagacctggatgaggttgtcatccccaca
atggagatcaaggtggatccatctggttgctatgacaacctggtgactgtcaggtccttc
ttgccccagtatcacctggccggaggagtcaacctgcccaagatcattgactgtgtcggc
tctgacggcaagagcaggagacaactggtcaagggtcaggacgacctgcgacaggatgca
gtgatgcagcaggtttttagcatgtgctccatgctgctgcagcgcaacacggacactcgc
aagaggaagctcaacatcaggcgatacaaggtggtgccgttctcacagcgtagcggtgtg
ttagagtggtgttctggcacagtgcctattggggagtttctggtggatcccaataaagga
gcccacaaacgcttcagaccccgggattggaccaacctcgcctgccgcaggaagatgatg
gaggctcagaagctggcgtttgatgagaagctccaggcctacagcgaggtgtgcaagaac
ttcaggccggtcttcaggtatttctgcatggaaagattcctggaccccgcagtgtggatg
gagaaacggctagcttacactcgcagtgtggccacctcttctatagttagctacatcgta
ggcctgggtgacagacacatccagaatattctggttgatgagcagactgctgaactggtg
cacatcgatttaggtgtggcctttgagcaggggaagatcctccccacccccgagactgtc
ccctttagactgtccagagacattgtggatgggatgggcatcactggagtggagggggtt
ttcaggagatgttgtgagaagactatggaggtgatgaggagctctcaagaagctctactg
actattgtagaggtgctgctgtatgaccctttgttcgactggaccatgaatccattgaag
gccttctacctgcagcatgacgaacagcaggagctcaacgcaacgctcagctccaccatg
gggggagatgacgtagacaaccaccgtaaatccagtgacagccagagtttcaacaaagtg
gcggagcgggtgctgctgaggctgcaggagaagctaaagggggtggaggagggcacggtg
ctcagtgtgggggggcaggtcaacctgctcatccaacaagccatggatcccaaaaacctc
agcagactcttcccaggctggcaggcctgggtatag
DBGET
integrated database retrieval system
