Perca flavescens (yellow perch): 114552376
Help
Entry
114552376 CDS
T07494
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114552376 (npas1)
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
114552376 (npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
114552376
NCBI-ProteinID:
XP_028428906
LinkDB
All DBs
Position
3:16117724..16182600
Genome browser
AA seq
810 aa
AA seq
DB search
MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRAFASQGDPPWSPLMEGDNNCSKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHTGPESASSSASTSSLAGTPEPAPSSPHSPADDPPDRGYF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSARSVRRPMGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIHVEDLENIRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSSATVSINHKAPHERNVIWVNYILSRTEMPDTPL
DILQLPENVRAERLRVSSSPTDSSPQARGTQPLKSSVGKSDLDTKGREKFTAAAIQSEDR
RKRLLRSDPEGAPPETRRRLEELRHAEESVSASSDLASESEGEEEEETEWDQGGDSDRLK
QEDTGGGKQSRGGETPARGERGSRVHNGRAVIQQLKSVVTPSPLAGSPSIKTEHEVLTTG
GRWGSHTQTSTSHTHTTQPQPSHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPSP
ALSPAMSVSSPLPREDRVVSGVVSRSSGGAGSAPDFELLQRLAAGGAAGRVLFHPLALGP
QGPQSLYAPSTIRYAPPELPPSHHHGLEHSDGLQLRSDHHKGPPPAFFPHLQRLAGLPPF
SGFSPSDSPFSSGLPFCMNGLRGAAGSEED
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatgccgtttgtcagtgaggggaagtgtgtgagtgtggagtgggatttccta
caaggactactggccaagcctcccacccttccctgtctccagaacctgcgtaaagagaag
tctcgcaatgcggctcgttcacggcgggggaaggagaatttcgagttctttgagctggcc
aagatgctgcctctgccgggggccatcaccagccagctggacaaggcctcagtcatccgg
ctgaccatcagctacctgcacatgcgagcctttgccagccagggagacccgccctggagc
cctctgatggagggagacaacaactgcagcaaagtaagacgatcgtctcattctctggcc
actgacatgtttgagcagcacctaggggcgcacctcctgcagtctctggatggctttgtg
ttcgtggtcagtcaggagggacgttttctctacatctcagagacagtttctatctacctg
ggcctctcacaggtggagctgaccggcagcagtgtgtttgactacatccacccggcggac
cacgtcgagatggccgagcggctgggaatcaggccgcatctgagggccgaggccggctgc
cacacgggccccgagagcgcttcaagctctgcatccacctcctccctggctggtacccct
gaacccgctccgtctagtcctcattctcctgctgatgatcctcccgaccgcggctacttc
atccgcatgaagtccacgctcaccaaaagaggcctgcacgtcaagtcgtctggatacaag
gtaatccatgtgacgggacgaatccgctgccgcccagcactcgtgccgggctctgcgcgc
tcagtgcgtcgaccgatgggtttagtcgcactggcacacacccttccaccctccacgctt
aatgaagtccgcatggagagccaaatgtttgtcttccgtgtgaacatggacctacaggtc
acatattgtgagaacaggatctcagagtatatggatctgaccccagcagaggtggtggga
cacacctgttaccacttcatccatgtagaagacctggaaaatatccggcagagccatgag
gacttgctgaggaaaggtcaggtggtgaccggttactaccgttggctccagaggagagga
ggctacctgtggatccagtccagcgccaccgtctccatcaaccacaaagctccacatgaa
cgcaacgtcatctgggtcaactacatcctgagtcgaacagagatgcctgacactcccctg
gatatactgcagctaccagagaatgtaagagcagagcgacttcgagttagctcgtctccc
accgacagctccccgcaggcccgaggcacgcagccattgaagagctcagtggggaagagt
gacctcgacactaaaggcagagagaaattcaccgccgctgccatccaatcagaagacagg
aggaagcgcctgctgaggtccgaccccgagggtgctcctcccgaaacccgtcgcagactg
gaggagctccgtcacgcagaggagagtgtatcagcctcctctgacctggcgagcgaaagc
gagggggaggaggaggaagagacagagtgggaccaggggggagacagtgacagattgaaa
caggaagacactggaggaggtaaacagagtaggggaggagagacccccgctagaggggag
agggggagcagggtgcacaacggccgggctgtgatccagcaactgaagagcgtagtgacc
ccgtctcccctggctggcagccccagcatcaagactgaacacgaagtcctgaccaccggg
gggcgctgggggtcacacacacaaacctccacctcccacacacacaccacccagccccaa
ccctcacatgcacacacaccctccagcagcctcaacggcgacagccccaccaccccaatc
cccgactcttcttccagcagcgaggcccccccaaaagggttgttcactcccccgtccccg
gctctgtcccccgccatgtccgtgtcctccccgctgccccgtgaggacagggttgtgtcg
ggggtggtcagtaggagcagcggcggtgcaggtagcgctccggactttgagctgctccag
agactggctgcaggcggcgcagcggggcgggtcctcttccaccccctggccctcggccca
cagggccctcagagcctctacgcccccagcactatccgctacgctccacctgagctgccc
ccctcccaccaccacggcttagaacacagcgatggcctgcagcttcgctcggaccaccac
aagggacccccgccagccttcttcccccacctacagcggttggctggcttgccacccttc
agtggtttctccccgtctgacagccctttctcctccggcctgcccttctgtatgaatgga
ctgaggggggctgcgggctccgaggaagactga
DBGET
integrated database retrieval system
