Perca flavescens (yellow perch): 114552411
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Entry
114552411 CDS
T07494
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04270
Vascular smooth muscle contraction
pflv04625
C-type lectin receptor signaling pathway
pflv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
114552411
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
114552411
09153 Circulatory system
04270 Vascular smooth muscle contraction
114552411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114552411
Membrane trafficking [BR:
pflv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
114552411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
114552411
NCBI-ProteinID:
XP_028428972
LinkDB
All DBs
Position
3:17383477..17433792
Genome browser
AA seq
1432 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDKKPKSDKTSLPSNEFDPTEALVVQKSGSSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLSEAESEMLGVSISSPNSPAA
ERPYSPLDRLSSTQPPWDENSSVCNQRVDMLQKMLSKEQQELQTMKEEYSRNPSPKLLKD
IQEAKKHIPQLHGQLIKATRATQEAVPGGDADDGSIFETGDNSTELSWSSTPISRGFGPG
SPESLYPRESSCPSPKNTPRNSFNSCYSPEAEDATDLDSLSPTTVSSPSSFRLVSQIIGA
EDDYFDSDPEQTNGQCNSFNSIEQLKSRPAHLAAFLHHVISQFDPAPVLCYLYADFYKQT
NSKETRRVFMDLHTFFIDRGANLKVAVPESISTDLDRRRTELIPEEINRQHVQTLQDSLL
PDIQKNLEDFRQKRSMGLTVAEVELTRLDQESVRDRVALERERSYAENIIAKIEDILLTT
QTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKKEKEGEEKVK
KPRFPSILGPQRWPGPFETASVGKTLDGRPRPQKQLSQPSLGASDHMEAVHLKSSQSSDG
SELTHSMSVNTSSPNNATYGSDTSRDTDMGGTPTSGLSRLSDGLQSDPLDRLHDPASPFE
LSSLEKLPEDGRESERTREGTPKAIRRLEGLGAADVQSEHVQGTVSEHDPPNWQQLVGRE
VLAGLRSHEIKRQEVINELFYTERAHVRMLRVLDHIFYQKLSKESILPPADIKNIFTNLD
EILQLHVSILEQMAAVRKRNESSVIDQIGDDLLSWFSGGEEEKIKKAVGTFCSNQPFALE
IIKTKEKNSRFTSFVQEAESNRLCRRLKLKDIIPVEMQRLTKYPLLLENIAKYTDNAVEK
DKVKQAADCCRTILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILELKNLDLTK
RTMVHEGPLSWKVNKDKTIELYTLLLQDILVLLQKQDERLILKCHSKNLAGTADTKHIFS
PIIKLNTVLVRSVATDNKSFFVLSMSENGAQIYELMAPTVSDQRTWQRLITQRADAMKVK
PHSVIPLPQTDGERDGVEIITAGVSRLSRDPDRTSTGSTQSTDKESNPAPRIVTQASLQG
NNPFEGVKAEEEEEEEEEEGFVDPEPPYQVAEDGKEGDSFDMFPSRADEALKTLAALKQV
LVTQLMSQEAVEQTKRSTGARLLRTTSLRTPVDSRARVMAHNGSQTEDLTQDLGSGDTGF
FDSPEDYAGYLVLEGYGGPGETSTDDDILASTTGKQLRTSQGCAADSGINLRFSSTSQAG
SLSSFSRQVLSHLRNLQVNLNYLKEVEAKYNNLIRQRPERSAADTDGNKDKR
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaaatagaaccagc
agcattctcagtaaagaccaccccccagacaagaaacccaaaagtgacaaaacctcactt
ccctccaatgagtttgaccctacagaagctctggtggtacagaagagtggcagcagcagt
gtgctagcagaggggaagcctgagtcctgtggtctggtccagcgatgtgtaatcatccag
aaagatgaaaatggctttgggcttactgtcagtggtgacaacccagtgtttgtgcagctt
gtcaaagaagatggggctgctatgcgggcaggtgttcagacaggagacaggatcatcaag
gttaacgggacccttgttacacattctaatcacattgaggtggtgaagcttatcaaatcg
ggctcctatgtggccctcacagtgttggggcgtcctccagggcttgcccagatccctttg
tctgaagcggagtctgaaatgttgggcgttagcatttcctctccaaattccccagcagca
gaacgcccctacagtcctctggaccgcctctcctccactcaaccaccatgggatgagaat
agcagtgtctgcaaccagagggttgacatgttgcaaaagatgctctcaaaagagcagcag
gagctgcagaccatgaaggaggagtacagcaggaacccctcccccaaactactgaaagac
atccaggaagctaagaaacacattcctcagctgcatggtcagctcatcaaggccactcgg
gcaacacaggaggctgttccaggtggtgatgcagatgatggtagcatttttgagacagga
gacaacagtacagagctgtcatggagcagcactcctatatctcgtggctttgggcctgga
tctccagagagcctgtacccaagagagtcatcctgccccagcccaaagaacacacccagg
aacagtttcaactcctgctactctccagaggcagaggacgccactgacctggactctctg
tcccctaccacagtcagcagtccctcttccttccgcctcgtctcgcaaatcattggagct
gaggacgactattttgattcagacccggagcagactaatggccaatgtaacagctttaac
agcattgagcagctcaagtctcgtccggcccacctcgcagccttccttcaccatgtcatc
tctcagtttgaccctgctcctgtgctgtgctacctctatgctgacttttacaagcagacc
aactccaaagagaccagacgggtgttcatggacctccacaccttcttcattgaccgtgga
gcaaatttgaaggttgctgttcctgaatccatctctaccgatctcgaccggcggcggaca
gaactgatccctgaggaaataaacagacaacatgttcaaacactgcaggactctctgctc
cctgacatccagaagaaccttgaggatttcaggcagaagcgcagtatgggcctaacggtg
gctgaagtagagttgaccagactggaccaagagagcgtcagagaccgtgtcgctctggag
cgagagcgctcatatgctgaaaacatcatcgccaagatagaggatatcctgttaacgact
cagaccacagaggaagagaaatgcactacaatgcagtatgtcatttatacatacatgaag
caccttggagtgagggtcaaggagcctcgcagtctggagtccaaacgggtcaggatcaac
tttcttcccaagatcaagaaaagcatcaagaaagaaaaggaaggagaagagaaggtgaag
aaacccagatttcccagtatccttggacctcaacgttggcccggcccctttgaaacagca
tcggtgggtaaaaccttggatggtcggcccaggccgcagaaacagttgtctcagccttcg
ctgggggcaagtgatcacatggaagctgttcatctaaaaagcagccaatcgagcgatggc
tctgaactcacacactccatgtctgtcaacacctcatccccaaacaacgccacctatggc
tcagacactagccgagacactgatatgggtgggactccgacctcaggcctctccaggctg
agtgacggtcttcagtccgatcctcttgacaggcttcacgaccctgcttctccctttgaa
ctttccagcctggaaaaactgccagaggacggcagagaaagcgaaagaacccgtgaggga
acaccaaaggccataagaaggcttgagggactgggtgcagctgatgtccagagtgagcac
gtccagggaacagtctctgagcatgaccctccaaactggcagcagctagtgggacgagag
gtccttgcgggtctcaggtctcacgaaatcaagagacaggaagttatcaatgagctgttt
tatacagagcgtgcgcatgttaggatgctgagagttttggaccacattttctaccagaag
ctctccaaagagtccatcctgcctccggcggacatcaagaacatcttcaccaacctagac
gagattctacagctgcatgtttcaatactggagcaaatggcagccgttcggaagagaaat
gagtcttcagtaattgatcagataggagacgacttgctctcctggttcagcggtggagag
gaggagaagatcaagaaggcagtggggactttctgcagcaaccagccttttgctctggag
atcataaagaccaaggagaagaactcgcggtttacatcgttcgtccaggaggcagagagt
aacagactgtgtcggcgactgaaacttaaggatatcattcccgtagagatgcagcggctc
accaagtaccccctcctactagagaacattgccaagtacacagacaacgcagtggagaag
gacaaagtgaagcaggcagcagactgctgcagaacgatcctcaatcacgtcaaccaggct
gtgaaagaatcggaggacaagcagaggttggaggactatcagagaagattggacctctcc
tctctaaagcagaccgacaaccccatgatcctggagctaaagaatttggatttaaccaag
agaacgatggtgcacgagggaccactgtcatggaaagtgaacaaagacaagactattgag
ttgtacacactcctcctgcaggacatcctggttttgctacagaagcaagatgagcgcctg
atcctgaagtgtcacagtaaaaacctggcaggcaccgcagacaccaaacatatcttcagc
cccatcatcaaactcaatactgtgctggtgcgctctgtggccacagacaacaagtccttc
ttcgtcctatccatgtcagaaaacggagcccagatctatgagttgatggcgcccacagtt
tcagatcagagaacgtggcagcgtctaatcacccagagagctgatgccatgaaagtcaaa
cctcacagcgtcataccattacctcagactgatggggagagagacggcgtggagatcatt
acagcaggtgtttccaggctgagtcgagacccagaccgcacatccaccggcagcacccag
tccacagataaagagagcaatccagcccctagaattgtgacgcaggcttctctacaaggt
aataatccctttgagggagtaaaggcagaggaagaggaagaagaggaggaggaggaaggt
tttgtggacccagagcctccctaccaagtggctgaagatggcaaagaaggagactcgttt
gacatgtttccttccagagcagacgaagcattgaaaacattggcagcattaaagcaggtg
ttggtgacccagctgatgtcccaggaggctgtagagcaaaccaaacgctccacgggggca
cgtctcctcaggaccacctctctgcggacccccgtagacagccgcgcacgggtgatggcc
cacaatggctcccagacagaggacctgactcaggacctgggctctggggacacgggcttc
ttcgattctcctgaagattatgcagggtatttagtcctggagggttacggcggcccaggg
gagactagcacagatgatgacatcttggcatcaaccacagggaagcagctgagaacctca
caaggctgtgctgccgactctggcatcaacttgaggttttcttcgacgtcacaggccggc
agcctctcctcttttagcagacaggtcttgtctcaccttagaaaccttcaggtcaacctc
aactacctgaaggaggttgaggccaagtacaataatctaatacgccaaaggccagagagg
tcagcagcagacacggatggaaacaaagataagagatag
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integrated database retrieval system
