Perca flavescens (yellow perch): 114552461
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Entry
114552461 CDS
T07494
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03440
Homologous recombination
pflv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114552461 (brca2)
03460 Fanconi anemia pathway
114552461 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflv04121
]
114552461 (brca2)
03036 Chromosome and associated proteins [BR:
pflv03036
]
114552461 (brca2)
03400 DNA repair and recombination proteins [BR:
pflv03400
]
114552461 (brca2)
Ubiquitin system [BR:
pflv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
114552461 (brca2)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
114552461 (brca2)
DNA repair and recombination proteins [BR:
pflv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
114552461 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
114552461 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
114552461
NCBI-ProteinID:
XP_028429064
LinkDB
All DBs
Position
3:2685746..2701544
Genome browser
AA seq
2981 aa
AA seq
DB search
MDLPSKNMYDTYKDEIWRELGPLDPDWFEALTAQTFTNEGNVSDQDDLCANQEGNFKTPF
DRTAVESQLFSTPKVFRQRRVVSPETEDEQSFTGEQEKETLPWTATQSPYLFRMSKEGVR
GAKYGGFHPQSEDSFDLLHTPQKSPVSYAKHVSESLGAQIHSDMSWTSSLNTPPPSTLIL
SKTDESPCPVSLSDEKNVVLVRKLFPSLSNASRVGVVSPNKHDIPNVHQGVVSPEPGQNP
ESHDSPQSSLNQRDAVWKQTLPDAIEDGDIRRTVASVLGGAENVLSIFFTNSSSALRKVK
TDRIKRKQIILTKEHDCSSADTSPTSSAASSEQRTADQAPGRLPSPPPVKTGEIGITQWS
PLSLSEISRCTVDTSCHDKNPVKQVENNILTEQLRSDPGQPVRPPMKLTDSGFTKKKRQF
VYTVKTSKTQVQGKETPSRKMDSSPGIPDFSGQEVNVKQLRKSPDEADCCSNWKNEMQKQ
GNLAEDNLLPSLRAKVQDLDMSQLCKDFAQDFSQISDPIKVSRIAEDTPQNGFSPSACLS
ALKQAKKKAVQANLHLDCDAVSNRRHVSNTNQNNPINEGTISDSGFQSAVVDGTRVTASS
FVLSSSEINGQSQQWTGFKTDIHWTTPFTSTNKGNGEAHSDDILPEAEMHCRLSSTIKER
QTLVPSRERKLHIESTSTQLPSNAKGTVDNINWIPLNGQVRGSLPEKTVYLPSVHALGFK
RASNKGIHISSANLERAKRLLEETEEEMTLSDQPTKCAHVTKDEMSMSDGSVKNLATYSN
QPFSSSEKNVDISCQLTASQKADVTELCTLLEEADSQFEFTQFKTAKLKQHCQDSATPSK
EVDKELDPDFLSGIDFDDSFSSEAEKHLAVTVMHDKMALVSDGKPNCETSNVTSKSTGLS
VSSAMKKENSSPEDVSFSSKHISEDSSRILSAEPKNLDRHGQTKTSHLENKNPLMLGGVG
FKTAGGNVLKVSKKCLSKARALFADLEENRVTSQNPPDKHNSKTDAKTLHKHSVDNPTGD
LLHRKKDNSKFTGDARERVQSCFSNAMESVCSDRQPRRDEDAIKTLKNSITDTTTRQRGF
QMANGKGISVSAKAMQEVDAFFENCDAIGGNGGMSVKPKKSIPLPGSVSLKENLPKGKHV
QGIKENLSEEPINEIENVNAGPVARHTEVVQHNVDSHNFGVKSTLALTNAASFRDNPSST
AKAHSSLSCTTSKSIGPPAIGELSNGGGFCLNRGKKVSTSADAMKKAEHLLNEIHTLDDA
NKQPKQKRDALRTGHLNNQIQVPPSKNGSFQMASGKQVAISSAALKKAKLLSECDKVEDK
ICVKPTDSKMAVPGPLSRNSGFLAASGKPVAFSSEALQKAKDLFSDISLSAEIPAVPDTR
NSDKKQVNADNTEKKHCGFTTAGGAKVHVSQKNLLKAKNLLEEFDDGFISAKAMQEADAF
FKDCDIMDDNDDMSVKHEKSIASVSGSGIGKNNFSKFKKGHKVSMQISEEPGGGCTELEN
VNVGLVVNHERMLHPDDVEIHKGVVMNTLDSTKAPSLHGNPTLMTESLSLQLCTTSIGSS
ANHELSKGGGFSTASGKEVSVSDDAMTKAKSLLNESATFEDANKQLKHKEDIFPTRNGGF
QMASGKGVTISSAALKKAKTLLSECDKVEDKICVKPTDSKMAVPGPQSRNSGFLAASGKP
VAFSSEALQKAKDLFSDISLSAEIPAVPDTRNCDKKQVNADNTEKKHCGFTTAGGAKVHV
SQKNLFKAKNLLTELADEECHSNSYSTSPHDTHKSDLSKVKDVKRTLNCNLSPEEEMSSV
LDCEINQTSSSEGSNVKRPQESSVVNFQSLNLSGCTETQQRFIAQEALDCTNALLEDESL
AGQSLSMTLENVPLQENPKSSHRSVEEQKGTRKRSVEYPDVTGQPPLKRRLLEEFDRTVD
GPRGSTLHPEKSFPNDIMKDRRVFKYSVSLHPNITRPHRNGNNYVETTLQKTKPTQQSTP
EDSRSAHSKMPVFVPPFLKDAKTESHKNTVLKDNTKTPTSFVPPFKKQMTIVQESSSKPQ
VETPFNSNTYVPPTKKTQSNTDVTGNKIKEDIQTAASADTTNDNLLNNQNSPVSCGSEDS
AAEASRVEDTVSTSQDMFQDLHNVELARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVSR
IPLKAAVNGKPPARYTPKQLYGHGVHQHVCEITSETAESFRFNLQQFLKQEAFIDGGGVQ
LADGGLLIPSNDGTAGKEEFHRALCDTPGVDPKLISEGWVYNHYRWIVWKQASMERSFPE
TMGSLCLTPEQVLLQLKYRYDVEVDHSRRPALRKIMEKDDTSAKTLVLCVCGVVSRGQSP
NRQSFSDTKTPQGADAKVENPSAVVMVTDGWYTIKAQLDEPLTAMLNKGRVAVGGKLIIH
GAQLVGSQDACSPLEAPESLMLKICANSSRPTRWDAKLGFHRDPRPFLLPVSCLYSSGGP
VGCVDIIILRSYPIQWMERKPDRGVVFRSVRAEEKEARRYNSIKQKAMEILYAKIQAEFE
KEDKGNKSQHRRRTITRQEISSLQDGEELYEAVGNDPAYLEAHLSEEQLETLRAYRCSLM
EKKQAVLQDRYRRALESAEDSEGVCPKREVTPVWRLCIADSMDQPGSVYQLNLWRPSSDL
QSLVKEGCRYKVYNLTTSDGKKHGCSTTLQLTGTKKSQFQDLQASRELLATHFQPRVSTR
FVDLQNPEFQPLCGEIDLTGYVISIVDGQGFSPAFYLTDGKLNFVKVRCFSSFAQAGLED
LVKPHVLLALSNLQLRGQSTSPTPVVYAGDLTLFSTNPKEVHLQESLSQLKNLIQGQENF
LPMAEEKFSHLVKSDGLKSISSPALQTRTPASATVRRQDTKTSVTPQQPVRSLGAFTPVS
RKPPAANCSSEKDPISLKRKRALDYLSRIPSPPPLSHLGSVASPCINKTFNPPRRSGTPS
TLKTVQTPACKPVNSPVEDDWVNDEELAMIDTQALRVGDLL
NT seq
8946 nt
NT seq
+upstream
nt +downstream
nt
atggatttaccctcaaaaaacatgtacgacacatacaaagatgaaatctggagagagctg
ggacccctggaccctgactggtttgaggcactgacagctcagacgttcactaacgaggga
aatgtgtctgatcaagatgacctgtgtgccaaccaagagggaaatttcaaaacacccttt
gacagaactgcagtagaaagccagctgttttcaacccccaaagtttttagacaacggcga
gttgtgtcacctgaaactgaggatgagcagtcgttcactggtgagcaagaaaaagaaaca
ttgccatggacagcaacacaaagtccatatttgtttcggatgtcaaaagagggggtccga
ggtgcaaaatatggaggtttccaccctcagagtgaggacagttttgatctgcttcataca
ccacaaaaatcccctgtcagctatgccaagcatgtatctgaaagtctcggagcacagatt
cattctgatatgtcatggaccagttctctgaatactccaccaccatccaccctgatttta
tctaaaacagatgagagtccctgtccagtgagtctttctgacgaaaaaaatgttgttttg
gtacggaagcttttcccttctctttcaaatgcatccagagttggagtcgtgtcacccaac
aagcatgacatacctaatgttcaccaaggtgttgtttcccctgagcctggtcagaatcca
gagtcccacgactccccccagagttcactgaatcagcgtgacgctgtttggaaacagacg
ctaccagacgctattgaggatggagatatacgcagaactgtagcaagtgttcttggcgga
gctgaaaatgttctctctatctttttcactaacagtagttcagcactgagaaaagtgaaa
actgacagaatcaaaagaaagcaaatcatcctgacaaaagaacatgactgcagctctgcg
gacacctcaccgacaagcagcgctgcatccagtgaacagagaacagctgatcaggcgcct
ggcaggcttccctcacccccaccggtgaaaactggagagattggaatcacccagtggtct
ccgctgagtttatctgaaatttcacgttgtactgtggatacttcttgccatgataagaat
cccgttaaacaagtggaaaacaatattttaacagaacaactgcggagtgaccctggccag
ccagtcaggccacctatgaaactcacagactctggattcactaagaaaaagagacaattt
gtttacactgttaagacttcaaaaacgcaggttcaaggaaaagaaacaccgtctcggaag
atggactcatccccagggattccggacttctctggacaagaagttaatgtgaagcagttg
aggaaatccccagatgaagcagactgttgcagtaattggaagaatgagatgcaaaaacag
ggaaatctcgctgaagacaacctacttccctctttacgagcaaaagtccaggatctggac
atgtcgcagctttgcaaagattttgctcaagacttcagtcaaatatcagaccccatcaaa
gtgagtagaatagcagaggatactcctcaaaatggcttctctccatcagcttgtctgtca
gcattgaaacaagctaagaagaaagcagtgcaagcgaaccttcaccttgactgtgatgcc
gtcagtaaccgaagacatgtttctaacactaatcaaaataaccccatcaatgagggcacg
ataagtgacagtggattccagtcagctgttgtagatggcactcgcgtgactgcatcatca
tttgttctttccagctcagagatcaatggtcaaagtcaacagtggactggctttaagact
gatatccactggaccactcctttcacatctacaaataaaggaaacggagaagcacattcg
gatgacattttaccagaagctgaaatgcattgcaggctgtccagtacaatcaaggaacgc
cagacactggtccccagcagagagcgcaagttgcacattgagagcacatcaacacaacta
cccagcaatgcaaaaggaactgtcgataacattaattggattccacttaatggtcaagtt
cgtggcagtctgccagagaaaaccgtttatcttccttccgtccatgcattaggattcaaa
agagcttcaaataagggtatacacatttcctcagccaacctggagagagccaaacgtctc
ttagaagagactgaggaagaaatgactttaagtgaccagcctaccaaatgtgcacatgtt
actaaagatgaaatgagcatgagtgatggatcagtgaaaaatctagccacttattcaaac
caaccattttcttcaagtgaaaaaaatgtggatatcagttgccaattaacagcttcacaa
aaagctgatgtgactgagctgtgtactctcttggaagaagcagacagccagtttgaattt
acacagtttaaaacagcaaagctgaaacaacactgtcaagatagtgccaccccctccaaa
gaagttgacaaagaacttgacccggattttctttcaggtatagattttgatgacagtttc
agttcagaagctgaaaagcacctggcagtaactgtgatgcatgacaaaatggccttagtt
tcagatggtaaaccaaactgtgaaacatccaacgtcacaagtaaatccacaggtctgtca
gtgtcgagtgcaatgaaaaaagagaattcctctcctgaagatgtgtctttctcttcaaag
cacatctctgaagacagtagccgtattctgtcagctgaacccaaaaatcttgatagacat
gggcagactaaaacaagccacctagagaacaaaaaccctttaatgcttggtggtgtggga
tttaagactgcaggaggaaatgttttgaaagtttcaaaaaagtgtctgagcaaagctaga
gctttgtttgcagatttagaggagaatcgtgtgacgagtcaaaacccacctgacaaacat
aatagcaaaactgatgctaaaacactgcataagcacagtgtggataatcccactggtgac
cttttgcatcgtaaaaaggataattccaaattcacaggtgatgccagagaacgggttcag
agctgtttttccaacgcgatggagtctgtctgttcagaccgacaaccacgcagagatgaa
gatgctataaaaactttgaaaaacagcataacggacacaaccacgcgtcaaagggggttc
cagatggccaatgggaaagggatttctgtttcagcgaaagctatgcaagaggtagatgct
ttcttcgaaaactgcgatgctatcggcggtaatggtggcatgtcagtaaaacctaaaaag
agcatacccttgcctggaagtgtcagtcttaaggaaaacctaccaaaaggtaaacatgtt
caagggataaaagaaaacctttctgaagaaccaatcaatgagattgaaaatgtgaatgct
ggtccagttgcacgccatacagaggttgtacaacataatgtggacagtcacaattttggt
gtcaagagtacactggctttaacaaatgcagcctctttccgtgataacccttcttcgact
gcaaaggcacattcatctctctcatgcacaacatcaaagagtattggcccccctgccatt
ggtgaattgagcaatggtggtggattttgtttaaaccgtgggaagaaagtatctacgtca
gctgatgcgatgaaaaaagcagaacatcttttgaatgaaattcatacacttgatgatgca
aacaaacaaccaaaacaaaaaagagacgctttaagaacaggccatctcaacaatcaaatt
caggttccaccatctaaaaatggtagctttcagatggccagtggcaaacaagtggccatt
tcatctgcagctctcaagaaagcaaaattgttgagtgaatgtgataaagttgaggataaa
atctgtgtaaaaccaacagattccaagatggcggtccctggtccactatccaggaatagt
ggatttcttgcagccagtggtaagccagtagcattttcgtccgaggccctccagaaggca
aaagatctcttcagtgacatcagcttgagtgcagagatcccagctgttccagacacaagg
aacagtgacaagaaacaagtcaatgctgacaatacagagaaaaaacattgtggttttaca
actgcagggggggcaaaagtccatgtgtcacagaaaaatctgttgaaagcaaaaaacctt
ttggaagaatttgacgatggttttatttcagcaaaggcaatgcaagaagcagatgctttc
ttcaaggactgtgacattatggatgataacgatgatatgtcagtaaaacatgagaaaagt
atagcatctgtgagtggaagtggcattgggaagaataacttttcaaaatttaaaaagggt
cacaaggtgtcaatgcaaatttctgaagagcctggaggtgggtgtactgagttagaaaat
gtgaacgtgggattagttgtaaaccatgaaaggatgctgcatcctgatgatgtggagatt
cacaaaggtgttgttatgaacacattggattcaaccaaagcaccttctttacatggaaac
ccaactttgatgacagagtcactttctctccagttgtgcacaacatcaattggttcctca
gccaaccatgaattgagcaaaggtggtgggttctctacagccagtgggaaggaagtatct
gtttcagatgatgcaatgacaaaagcaaagtctctattgaatgaaagtgctacatttgag
gacgcaaacaaacaactgaaacacaaagaagacatctttccaacacggaacggtggattt
cagatggccagtggcaaaggagttacgatttcatctgcagctcttaagaaagcaaaaact
cttctaagtgaatgtgataaagttgaggacaaaatctgtgtaaaaccaacagattccaag
atggcggtgcctggtccacaatctaggaatagtggatttcttgcagccagtggtaagcca
gtagcattttcatccgaggccctccagaaggcaaaagatctcttcagtgacatcagcttg
agtgcagagatcccagctgttccagacacaaggaactgtgacaagaaacaagtcaatgct
gacaatacagagaaaaaacattgtggttttacaactgcagggggggcaaaagtccatgtg
tcacaaaaaaatctgtttaaagcaaaaaaccttttgacagaattggccgatgaggagtgt
cattcaaactcatactcaacaagcccacatgacacccataagtcagatctatcaaaagtg
aaagatgtgaaaagaactttgaattgtaatctcagccctgaagaggaaatgtcaagtgtg
ctggactgtgaaataaatcagacaagcagcagcgagggatctaatgtcaaaaggccacaa
gagtcttcagttgtaaactttcaatcacttaacctaagtggctgcactgaaacccagcag
aggtttattgcccaggaagctctggactgcactaatgctttgttagaggatgaaagtcta
gctggccaaagtctctcaatgactttagaaaatgtgccactgcaagaaaacccaaaatca
agccacagatctgtagaggaacaaaaaggaaccaggaaaagatcagtcgagtacccagat
gtgactggtcagcctcccctgaaaagaagattactggaagaattcgacagaactgtcgat
ggcccgagaggttcaaccctccatccggaaaaaagttttccaaatgatataatgaaagac
aggagggttttcaagtacagcgtctctctccatccaaacatcacaaggccacacaggaat
ggaaataattatgtggaaaccacattgcaaaagacaaaaccaacacaacagtcaacccca
gaagacagcagatcagcacattccaagatgccagtgtttgttcctccattcctcaaggat
gcaaagacagagagtcacaagaatacagtgcttaaggacaacacaaaaacacctacttca
tttgttcctccattcaaaaagcaaatgactattgtccaagagagctcctctaaaccccag
gtggaaacaccctttaacagcaacacttatgtaccgcccactaaaaaaacacaaagcaat
acagacgtaactggtaataaaattaaagaagacattcagacggcggcctcggctgacact
acaaatgataatctgctaaataatcaaaactctcctgttagctgtggatccgaggactct
gctgcagaggcatcccgtgtggaggacactgtgtccacaagccaagacatgtttcaggat
cttcataacgtagagctggcacgagatatgcaagacatgaggatcaggaaaaagaagcgc
cagaccattcgacctttgccgggaagtttgtttctaaccaaaacctcaggagtgtcgagg
ataccattaaaagctgcagtaaatggaaagcctcctgcaagatacaccccaaaacagctg
tatggacatggagttcatcagcatgtgtgtgagatcaccagtgagacggcagaatctttt
cgcttcaatttacagcagttcctcaaacaggaagcctttatagacggtggtggtgttcag
cttgctgatggaggattactgatccccagcaatgatgggactgcagggaaagaagagttt
catagagcattatgtgacaccccaggtgtggaccctaaactgatcagtgaagggtgggtg
tacaatcactaccgatggattgtatggaagcaggcctccatggaaagatcatttccagaa
acaatgggcagcctctgtctcaccccagagcaggtcctcctacaactcaagtacagatat
gatgtagaggtggaccacagccgcaggccggctctgagaaagatcatggaaaaggacgac
acatcagccaaaaccctggtcctctgtgtatgcggggtcgtctccaggggccagtcccca
aacagacagagtttcagtgacactaagactccacaaggtgctgatgccaaggttgaaaac
ccgtccgcagtggtgatggtgacagatggatggtacaccattaaagcccagctagatgaa
cctttgactgccatgcttaacaaaggtcgagtggctgtcggtgggaagttgatcatccat
ggagctcagctggtgggatctcaagatgcttgctcccctctggaggcacctgaatctctc
atgttaaagatttgcgccaatagcagcagacctacacgatgggatgctaagctgggattt
cacagggatccacggccattcctgcttcctgtctcctgtttgtacagcagcggaggacca
gtaggatgtgtggacattatcattctgagaagctaccccatccagtggatggagaggaaa
ccagacagaggcgtagtgttccgttctgttcgtgcagaagagaaggaggcgagacgatac
aacagcatcaaacaaaaagctatggagatcctatatgccaagattcaagcggaatttgaa
aaggaggacaaaggcaataaatctcaacatagaagacggacaatcacccgtcaggagatt
tcaagtcttcaagatggagaagagctctatgaagcagtggggaatgacccagcttacctc
gaggctcatttgagtgaagagcagttggagactctgcgtgcctaccggtgttctctgatg
gagaagaagcaggctgtactgcaggatcgctaccggagggctttagaaagtgcagaggac
agcgaaggagtctgtcccaagcgagaggttacacctgtgtggagactctgcattgctgac
tccatggaccaaccaggcagtgtttaccagttgaatctttggcgaccttcctcggacctt
cagtctttagtgaaggaaggctgtcgatacaaagtctataacctcaccacttcggatgga
aagaaacatggttgtagcacaacacttcagctgactgggacaaagaaatcccagtttcag
gacctacaggcttctcgggaattgttagcaacacattttcaaccgagggtctctacccgt
tttgtggatcttcaaaacccagaattccagccgctgtgtggagaaattgatctcacagga
tatgtcatcagtattgtagatgggcagggtttctctcctgcattttatttgaccgatggg
aaactgaactttgttaaagtgcgctgtttcagcagctttgctcaggctggcttagaagat
ttggtaaaaccacatgtcctcttggctctgagcaacctgcagctgagaggtcagtccaca
tctcccactcctgttgtgtacgctggagatctgaccctcttctcaacaaaccccaaggaa
gtacatctacaggaatccctcagccaactcaaaaacctgatccagggtcaggagaacttc
cttccaatggctgaggagaagttttcacatttagtcaaatctgatggcctaaagtccatc
tcctctccagcgctgcaaacacgaaccccagcttctgcaacggtcagaagacaagacaca
aaaacaagtgtgacccctcagcagccagtcagaagccttggagcattcacgccggtcagt
aggaaacctcccgcagcaaactgttcgtcagagaaagaccctatcagcctgaagaggaag
agagctctggactatctgtctcgcatcccgtctccaccacctctctcccatctgggctca
gtggcgtctccgtgtataaataagaccttcaacccccctcggcggtctgggacacctagc
actttaaaaactgtacagactccagcttgcaaacccgtcaattcacctgtggaggatgat
tgggtgaatgacgaggaactggctatgattgatactcaggcattgcgtgttggtgattta
ctgtag
DBGET
integrated database retrieval system
