Perca flavescens (yellow perch): 114552735
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Entry
114552735 CDS
T07494
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04137
Mitophagy - animal
pflv04140
Autophagy - animal
pflv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114552735
04137 Mitophagy - animal
114552735
04148 Efferocytosis
114552735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114552735
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
114552735
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
114552735
NCBI-ProteinID:
XP_028429548
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All DBs
Position
3:complement(34252219..34276951)
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AA seq
687 aa
AA seq
DB search
MNEKEETVAVKRTGSEQRKLRSRDAARSRRSQETEVFYELASTLPLPRRVCTHLDKSAIM
RVALSFLRLHHLLRPGKNQKEESEEQDGEEEEEEEEEDPMDAFYPQALAGFVMVMTEEGD
MIYLTDNVSKYLGITQLELLGQNIYDFVHPCDEEELRDLLTPRPGSSKKLLAEQPSERNF
FLRMKSTLTSRGRTVNIKSATWKVFHCSGHMRQLSGGSTSPSVGGVMTLLCEPIPHPSSV
EFPLDTCTFLTRHSMDLRFTHCEGRVTELVGYKPDDLIGRSAYEFYHALDSSHINKSLHT
LLSKGQVSTRHYRFLANSGGFVWAETQATVLYNSKMSQPEAIVCLNFILSAVEQPDVVFS
VEQIRCGRLPEAKPNSPALATENCGTSDFSDSDPDSEHLSSSSQTEDVDLNPSSTAELFN
KLKENPEELLLLAPASGDSVVPLIGDLVELSFASPPSPQSVPDHPQYLCTPQLRKLLSPI
FSPITPPLSSSSSAASSPDPEPVQSPCEEEKEGIDTSMVEQFFAVWPKDNQQKGETQEHL
EMMDLDMLAPYISMDDDFQLTVTSSLQEADRPSSLSEPSTVTVSRKRTRNPDEAVLSQLM
IQDKRPKQDPCSIEEELLLSHRFLGCLEETYQSDLFLESGPGRKNPLLTDRDPILGGMQG
LCDTASLMRDLFTPRPPDLSPPLSPMT
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagaaagaggagaccgtcgcagttaagcggaccggttcggagcagaggaagctg
cggtctcgtgatgcggccagaagtaggcggagtcaggagacggaggtgttttatgagctc
gccagcactctgccgctcccccgtcgagtctgcacccacctggacaaatccgccatcatg
agagtcgccctcagcttcctgaggctgcaccacctcctcagacccggtaagaatcagaaa
gaggagtctgaagagcaggatggagaggaggaggaggaggaggaggaggaagatccaatg
gatgctttctatcctcaggcgctggcgggcttcgtcatggtgatgaccgaggagggagac
atgatctacctgacggacaacgtcagcaaatatctcggaatcacgcagctggagctgctg
ggtcagaatatttatgactttgttcacccctgtgatgaggaggagctccgagacctgctg
actccacgtccaggttcgagtaagaaactgttggcagaacagccgagtgagaggaacttc
ttcctgcgaatgaagagcactctgaccagcagggggcgcaccgtcaacatcaagtctgct
acctggaaggttttccactgcagcggtcacatgcgtcagttgtctggcggctccacgtcg
ccctctgtaggcggagtgatgaccctgctgtgtgaacccatccctcacccgtccagcgtg
gagttccccctggacacgtgcaccttcctcacccgccacagcatggacctgcgcttcaca
cactgcgagggcagggtgacagagttggtgggatacaaacctgacgatttgattggccgc
tcagcctacgagttttatcacgcactcgactccagtcacatcaacaagagcctgcacaca
ttgctgtccaaaggtcaggtgagcaccagacactaccgtttcttggcaaacagcggtggg
ttcgtctgggccgagactcaggcgaccgtcctctacaacagcaagatgtcacagcccgag
gcgatcgtctgcctcaacttcatactcagtgccgtggagcagccagacgttgtgttctct
gtagagcagatccgttgtggccggctgcctgaagccaaacccaactcgccagcgcttgca
acagagaattgtgggacctctgacttcagtgactctgaccctgacagtgagcatctcagc
agctccagtcagactgaggacgtggatttgaatcccagcagcactgcagagctcttcaac
aaactgaaggagaacccggaggagcttctcctgttggctcctgccagtggagacagcgtt
gtcccgctgataggagatttagttgagctgtcgttcgccagtcctcccagtccacagtca
gtgccggaccaccctcagtacctgtgcactccacagctgcgaaagctcctctcccccatc
ttcagccccatcactccacctttatcatcatcatcatcagcagcctcctcacctgatcct
gagccagtgcagagcccctgtgaggaggagaaagaggggattgacaccagcatggtggag
cagttctttgccgtttggccaaaagataatcagcagaaaggagaaacacaggagcacttg
gagatgatggatctggacatgttggctccttatatctctatggatgatgacttccagctg
accgtcaccagcagtttgcaggaagccgacagaccatcctctttgtctgaaccctcgact
gtcacagtgagcaggaaacggactcgtaacccagatgaggcggtgctgtcccagctaatg
attcaggacaagagaccgaaacaagatccttgctcaatcgaagaggaactgctcctcagc
cacagatttctgggctgtctggaggaaacctaccaatcagatttgttccttgagtcgggt
cctggcagaaaaaatcctcttctcacagacagagaccctattttgggaggcatgcaggga
ctctgtgatactgcatctctgatgagggacttatttacacctcgtccaccggacctgtcg
ccgcctctctcccctatgacttga
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