Perca flavescens (yellow perch): 114552837
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Entry
114552837 CDS
T07494
Symbol
hnf1b
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114552837 (hnf1b)
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
114552837 (hnf1b)
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GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
APP1_cat
Motif
Other DBs
NCBI-GeneID:
114552837
NCBI-ProteinID:
XP_028429730
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Position
3:549297..564533
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AA seq
571 aa
AA seq
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MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPPGFGVKLENLSMSPARPHS
GKMNGADADSKPVFHTLTNGHSKGKLSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRA
EVDRMLSEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAAL
YTWYVRKQREILRQFNQAVLGSGSNMTDKGNQDPVFFFPEFNPSGQGMGPPGEEVGSEPS
CKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLG
SNLVTEVRVYNWFANRRKEEAFRQKLAMDSVSLPPHSMNPLLSHSSPHHTSISPPMRYSQ
GPGEVTSSTAISHHSSNGMATSQSVLQQVSPGGLDHSHSLLSPDVKMISGSGGGLPPVST
LTNIHSSHHSHQQTQNLIMPLSGVMAIAQSLNTSQSQPVPVINSVAGSLAALQPVQFSQQ
LHSPHQQSLMQQSPSHMSQQPFMATVTHSHMYPHKQEPPQYSHPSRFPSAMVVTDANSIS
TLSSMSSSKTDGPVNKMVQLGGLSWCPLQAW
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgttctctaaaatggtatccaagctgacatccctgcagcaggagctcctcagcgccctg
ctggactcaggagttaccaaagatgttctgatccaggccctggatgatatggaccccagc
ccgccgggctttggagtaaaactggagaacctatccatgtcccccgctcgtcctcacagc
ggcaagatgaacggggcggacgccgactccaagcccgtcttccacacgctcaccaacggc
cacagcaagggcaagctgtccggggacgagggctctgaggacggggacgactacgacacc
ccgccgatactcaaggagctccagtcgctcaacacggaagaggccgccgagcagagggcg
gaggtggaccgcatgttatcagaggatccatggcgtgctgcccgcatgatcaaaggttac
atgcaacagcacaacatcccccaacgggaggtggtggacgttacagggctgaaccaatct
cacctctcccagcatctcaacaaaggcacgcccatgaaaacacagaagcgagcggccctc
tacacctggtacgtcaggaaacagcgggaaattctcagacagttcaaccaggcagtgcta
ggctctggcagcaacatgacagacaaaggcaatcaggatccggtgttttttttcccagag
ttcaacccgtccggtcagggcatgggtccgcctggtgaagaggttggcagtgaaccctcc
tgcaagaaaatgagacgtaaccgtttcaaatgggggcctgcgtcacagcaaatcctgtac
caggcctatgaacggcagaaaaaccccagcaaggaggagagggaagcgttggtggaagag
tgcaacagagccgaatgtcttcagagaggcgtctccccctccaaagctcagggcctcggc
tctaatctggtcactgaagtgcgagtctacaactggtttgccaaccggcgtaaagaggaa
gccttcaggcaaaagctggccatggactccgttagtctaccgccccacagtatgaaccct
ctactgtcacacagctcgccacatcataccagcatttcacctcccatgcgttacagccaa
ggccccggtgaagtcacctcctccacggccatcagtcaccacagtagcaacggcatggcg
accagccagtcggtgcttcagcaggtgtctccgggaggattggaccacagccacagtctg
ctgtcacccgacgtcaagatgatttcaggctcaggtggaggacttcctccagtcagtaca
ctgaccaacatccacagttcccatcacagccatcagcagacacagaacctcatcatgcct
ctatctggagtcatggccatagcacagagtttaaacacatcgcaatctcagccggtgcca
gtgatcaacagcgtggcgggcagccttgcggcgctgcagccggtgcagttttcccagcag
ctccacagcccccaccagcagagcctgatgcagcagtcccccagccacatgagccagcag
ccgttcatggctactgtcacacactcccacatgtatcctcacaaacaagaacccccacaa
tattcccacccgtcccgtttcccctcggccatggtggtcacagacgccaacagcatcagc
accctcagctccatgtcctcgagcaagacggacggtcccgtaaacaagatggtgcaactt
gggggtctctcctggtgtcctcttcaagcttggtga
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