Perca flavescens (yellow perch): 114553102
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Entry
114553102 CDS
T07494
Name
(RefSeq) splicing factor, arginine/serine-rich 15-like isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflv03021
]
114553102
03041 Spliceosome [BR:
pflv03041
]
114553102
Transcription machinery [BR:
pflv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114553102
Spliceosome [BR:
pflv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
114553102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
MscS_TM
Motif
Other DBs
NCBI-GeneID:
114553102
NCBI-ProteinID:
XP_028430028
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Position
3:3567039..3605883
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AA seq
758 aa
AA seq
DB search
MDAVNAFNTELFSMIDMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVDKDVFAARFLKNFTDTFQNLYCCPEDDKSKIIRVLNLWQKN
GVFDMGIIQPLMDMANGAIVPAPALEVIADAQPETQLPVTSASVVPAVPKVPSPDALAAV
AQLFQSPHGQELQRMLQNFQQADKNLTATIANNIPSPPQMHVAQLNPYSAHTEKKSSLAE
KLLDRFDYDDEPEDLMAKEGQSQGIPENVFNQYPGQMSNAENVHPHMTGQTGGIEHGGGT
SHGEHHMMLDGYRSLNEAYSHSRGNSREDSSTRREGRHRGYGRRSRSRSGSRSPRRRRSR
SSSCSKRSRHRRSRSREQRWRSRSRSQDRNEREKDRERRQKGLPSIKSQTLSVCSTTLWV
GQLDKKTQQSDVMSLLEEFGQIESINMIPPRGCAYIVMVHRQDANTALNKLSRGSYKVNQ
KPVKIAWALNKGIKSAHKKFWDVERGVTYVPWSKVKVEELESYREGGILDAETLNPEWNH
GKDLNKQAAVNGALESVPADGTVTAHVQVPPVQQAVPIRSPPAFPGPIMLSPTAMPPGGA
PFLPTEFGPTKLAPAGSVKHPEESPNASIGDKGTPSDSGSDNHLGSPGAPVMTMPGPGVM
QGPRPGMPPLQPPPGMPNPHLSPFLSPPHMPHLPPQMMPRGPMFPPDRFRMPMHFPPRGP
PFHQHPSMGHEGMDGREGRHFRNGRPGFGCPPFHRGRW
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagtgaacgcgttcaacacggagttgttctccatgattgacatgaagcctcca
atatcccgtgctaagatgatgtctgtgacaaaatcagccatcaaagctatcaagctttac
aaacatgttgtccaaattgttgaaaagttcatcaagaagtgcaagccagaactaaaagtc
cctggtttgtatgtggtggactccattgttcgacagtcacggcatcagtttggtgttgac
aaggatgtatttgcggcaagattcttaaagaacttcacagataccttccaaaacctgtac
tgttgcccagaggatgataagagcaaaattattcgagtcctgaatctgtggcagaagaat
ggtgtgttcgacatgggcatcattcagcctctgatggatatggccaatggagctattgta
cctgcccctgcactcgaagttattgctgacgcccaaccagagacacagcttcctgtcact
agtgcctcggttgtccctgctgtgcctaaggtacccagtcctgatgccttagctgctgtg
gcacagctttttcagtccccgcatggtcaagagctgcagagaatgctccagaacttccag
caggcagataagaacctgacagccaccatcgcaaacaacataccaagcccaccgcagatg
catgtggcccagctcaacccatacagtgcacacactgaaaagaagagctctttagccgag
aaactccttgaccgatttgactatgacgatgaacctgaggatttaatggctaaagaaggc
cagtcacaaggcattcctgaaaatgtgtttaaccagtatcctggtcagatgtccaacgca
gagaatgttcatccacacatgacgggacagactggtggcatagagcacggtggaggaacg
agccatggtgaacatcatatgatgctcgatggataccgttccttaaatgaggcttattca
cactcgcggggaaattcaagagaggactcctctacgaggcgagagggcagacacagaggc
tatggcagaagatcaagatccagatctggttcaagatctcccaggagaagaagatcaaga
tcttcgtcctgctcgaaaagatcaaggcatcgacgctctcgctctagggaacagcgctgg
agatctcgctctcgttctcaggacaggaatgaaagagaaaaggacagagaacgcagacag
aaaggtcttcccagcataaagagccagacactcagtgtttgcagcactacactttgggtt
ggacagctagacaaaaaaactcagcagtccgacgtgatgtcccttttggaagagtttggc
cagattgagtccatcaatatgattcctccgaggggttgtgcctacattgttatggttcac
agacaagacgctaatacagccttgaacaaactcagtagggggtcatacaaagtcaatcag
aaacctgttaagattgcttgggctttgaacaaaggtataaaatcagcgcacaaaaagttc
tgggatgtggagcgaggagttacctacgtcccctggagcaaagtcaaagtggaggagttg
gagagctatcgggaagggggtatactggacgcagagacactaaatccagagtggaatcat
ggcaaggacctcaataagcaggcagctgtaaatggagcgctggaaagtgtaccagcagat
ggaaccgtcactgctcacgttcaggtgccaccggttcaacaggcagtacccatcaggagt
ccacctgcttttcctggccccatcatgctgtcccctacagccatgcctccaggaggagct
cctttcctccccacagagtttggccctacaaagttggcaccagcaggaagtgtaaaacat
ccagaagagtcccccaatgcttctataggagacaaaggcacaccctcagattcgggcagc
gacaaccacctggggtctcctggagcaccggtgatgaccatgccaggcccaggagtcatg
cagggtcccagaccgggtatgccacctctgcagccccctcccggcatgccgaatcctcat
ctatctccattcctctcgcctccacacatgccacacctgcccccgcaaatgatgccccgg
ggacccatgttcccaccagataggttcagaatgcctatgcactttcctcctcgtggccct
cctttccatcaacatccttctatgggacatgagggcatggatggcagagaagggcgacat
ttccgaaatgggaggccagggtttgggtgcccacccttccacagagggagatggtag
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