Perca flavescens (yellow perch): 114553124
Help
Entry
114553124 CDS
T07494
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114553124 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114553124 (cstf3)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
114553124 (cstf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
PRP6_TPR
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
114553124
NCBI-ProteinID:
XP_028430097
LinkDB
All DBs
Position
1:27538816..27550771
Genome browser
AA seq
716 aa
AA seq
DB search
MATEGTADQAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVT
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAMLPETVVTPSAPSLKDEADRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVLLMKLLPPPTCFTGPFVQVDEIMETFRRCTLPETVDAAVELIT
GRQPDAGGEGNGSMENHAVAKSLKRPNADSDEEDDKGAVAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagggaacagccgaccaggcagcggcagagtatattccagagaaggtgaag
aaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaaccaacccatagataaagcaaggaagacatatgagcgacttgtcacg
cagttcccaagttctggcagattctggaaactgttcattgaagccgagatcaaggcaaaa
aactatgacaaggtagaaaagttgtttcagagatgcctaatgaaagtcttgcacatcgac
ctttggaaatgttacctctcgtatgttcgagagaccaaagggaagctgcccagctacaaa
gagaagatggcccaggcatatgactttgccctggataaaattggcatggaaattatgtcc
tatcagatttgggtggactacatcaacttcctcaaaggagttgaggcggtgggctcgtac
gcagagaaccaaagaatcactgcagtacggcgggtgtaccagagaggctgtgtgaacccc
atgatcaacattgagcagctctggagggattatagcaaatatgaggaggggatcaatgtg
cacttggccaaaaagatgattgaggaccgaagtagggactacatgaatgccaggagagtg
gcaaaggagtatgagactgtgatgaaggggctggacaggaatgcgccatcagtaccgccc
cagaactcccctcaggaagcccagcaagtggaaatgtggaagaagtacatccagtgggaa
aaaagcaacccgctgcgcacagaagaccagaccctcatcacaaagagagtgatgtttgcc
tatgagcagtgcctgctggtgctgggccaccatcctgacgtttggtacgaggcagcacag
tacctggagcagtccagcaaactgctggcagagaaaggggatatgaataattccaagctg
tttagtgacgaggcagccaacatctacgaacgtgccatcgggactcttctgaagaagaac
atgctgctgtacttttcatttgcagactacgaagaaagtcgcatgaagtacgagaaggtc
cacagcatctataacaaactgctggccattgaggacattgaccccacgctggtctacatt
cagtacatgaagtttgccaggagggcagaaggaatcaagtcaggtcgcaccatcttcaaa
aaagccagagaggatttacgcacgcgtcaccatgtgtatgtgacggcagcactgatggag
tactactgcagcaaggataaatcggtagccttcaagatttttgaacttggtttgaagaaa
tacggggacattccagagtacatactggcatacattgattacctctcacaccttaacgag
gataacaacaccagggttctgtttgaacgtgtcctcacctcaggaagcttgtcgccagaa
aagtccggcgagatctgggctcggttcctggcttttgagagcaacataggagacctggcc
agtatcctgaaagtggagcgcaggcgtttcactgccttcaaggacgagtatgagggcaaa
gaaaccgccttgctggtagatagatacaagttcatggacctgtatccctgctctgctagt
gaacttaaggcccttggatacaaggatgtgtcgcgcgccaaactggcagcaatgctccca
gagactgtggtgacgccctctgcgccttcactaaaggacgaagctgaccgtaaacccgag
taccccaaacctgacaccaatcagatgatccccttccagccacgtcaccttgcccctcca
ggtttacatcctgtccctggtggagttttcccagtccccccagctgctgttctcctaatg
aagctgctccctccgcctacgtgcttcactggaccctttgttcaagtggatgagatcatg
gaaacattcaggagatgcacacttcctgagactgttgatgctgctgtagagctgatcact
ggtagacagcccgatgcaggaggggagggcaatggatccatggagaaccatgctgttgcc
aagtcactgaagaggcctaacgcagactccgacgaggaggatgacaaaggagctgtggct
ccgcccatacacgacatctaccgtgcacgccaacagaagaggattcgataa
DBGET
integrated database retrieval system
