Perca flavescens (yellow perch): 114553176
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Entry
114553176 CDS
T07494
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflv04131
]
114553176 (vps53)
Membrane trafficking [BR:
pflv04131
]
Protein recycling
Others
EARP complex
114553176 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
114553176 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
Laminin_II
GrpE
Syndetin_C
FBF1
Sec8_N
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
114553176
NCBI-ProteinID:
XP_028430157
LinkDB
All DBs
Position
3:complement(18943662..18972891)
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AA seq
830 aa
AA seq
DB search
MMEEEEFEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQMAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHGKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEESFPAQGSKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYLRMFPEDWCMTERIAVEFCHITRVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDTPGQKKPESPLETTNPFLEDEAGEDVGTDKDQDLAKPRKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSGGLTISSLLKEKEGSEA
AKFTMDELCLICSILSTAEYCLATTQQLEEKLKEKVDKLLMERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKRS
EQSSMLELFRQRLPTPPSGADGGSSLFSTPTPEQESSRIRKLEKLIKKRL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaagaatttgaatttgctgaggatttggaggctattttgcatttaacc
ccagaggtgcaactagccatcgaacaggtgttcccaagccaagaccccctggacagagca
gacttcaatgctgtggaatacatcaacacactgtttcccaccgagcagtctttggctaat
attgatgatgtggttaacaagattcgtctgaagatccggcgcctggatgacaacatcagg
acagtggtgaggggccaaaccaatgtgggccaggatggcagacaggctttggaagaggcc
cagatggccatccagcagctttttggcaaaatcaaagacatcaaggacaaggcagagaag
tctgaacaaatggtgaaggagattacgagggacataaagcagctggaccatgggaagcgc
cacctaactacatccatcaccaccctcaaccacctgcatatgttggcagggggtgttgac
tctttagaagccatgaccagaaagaggcagtatggtgaggtggccaacctgcttcaggga
gtggtcaacgtgcttgaacatttccacaagtacatgggcataccccagatcagacagctt
tctgagagagtcaaggcagcgcagagtgagttggggactcagatcctggcagattttgaa
gaatccttccccgctcaaggctccaagagaccaggtggtcccagtaacgtgcttagagat
gcctgcctggtggccaatgtgctggatccgcgcatcaaacaggagatcataaaaaagttc
atcaggcagcacctctcagagtaccttgtattattccaagaaaaccaagatgtggcatgg
ctagacaagatcgatcgccgctatgcctggatcaaacggcagctggtcgactatgaggag
aagtatttacgcatgtttcctgaggattggtgcatgacagagcgtattgctgtggagttc
tgccacatcaccagggtggagctagccaaagtgatgcgaacacgggctaaggagattgag
gtgaagctgcttctgtttgctattcagaggaccacaaacttcgagggtcttctggccaaa
cgcttcacaggatgcaccttgactgacacgcccggacagaagaagccagagagccctctc
gagaccactaaccccttcctggaggatgaggcaggtgaggatgtgggcacagataaggac
caggatctggctaagcccaggaagccaaaagctccggacaaccctttccatggcattgtc
tccaagtgctttgaacctcatctatacgtctacatagaatcccaagacaagaacctgggc
gaactgattgaccggtttgtggctgacttccgagcacaaggcccacccaaggcaggcacg
gaggagggcggagcagtgctgcccagctgtgctgacctctttgtctattacaagaagtgc
atggtgcagtgctcccaactgagcaccggggaaccaatgatcgccctcacaactatcttc
cagaaattcctgagagagtacgcttggaagattctctctggcaacctacctaaatccagc
agtaacagtgggggtcttaccatcagcagtctgctgaaggagaaagaaggctcagaagct
gctaaattcaccatggatgagctttgcttgatctgtagcatcctcagtactgcagagtac
tgcctggccaccacacaacagttggaagagaaactaaaggaaaaggtggataaactcctc
atggagagaataaatttgactggggagatggatacattcagcactgtgatctcgaacagt
atccagctacttgttcaagatcttgatgctgcctgtgaccctgctctcactgccatgagc
aagatgccgtggcagagtgtggagcacgtgggcgaccagagtccttatgtgacgtcaatc
atcatgcacattaagcaaaatgtgccgatcatcagagacaatctggcctccacgcgcaaa
tactttacacaattctgcatcaagttcacaaattctttcattcccaaatttatcaaccac
ctgttcagatgtaagcctattagcatggtgggagctgaacaactcctccttgacactcac
tccctgaagaccgtcttgctggatctgccctcaataggctcccaggtgctccgtaaggca
ccagccagctacaccaagatagtggtgaaaggcatgacccgtgcagagatgatccttaag
gtggtgatggccccacatgaaccaccagtggtgtttgttgataactacatcaagctcctg
gctgatggaaatcctgagaccttccagaagattctggacatgaagggtctgaagcgcagt
gaacagagcagcatgttggagctcttcaggcagaggctacccactccaccgtccggggcc
gacggcggctcctctctcttcagtacacctacccctgagcaggagtcctcccgcatccgc
aaactagagaaactcatcaagaagagactgtga
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