KEGG   Perca flavescens (yellow perch): 114553192
Entry
114553192         CDS       T07494                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03020  RNA polymerase
pflv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114553192 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    114553192 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pflv03021]
    114553192 (polr2d)
   03400 DNA repair and recombination proteins [BR:pflv03400]
    114553192 (polr2d)
Transcription machinery [BR:pflv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     114553192 (polr2d)
DNA repair and recombination proteins [BR:pflv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114553192 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 114553192
NCBI-ProteinID: XP_028430191
LinkDB
Position
3:41991027..41998794
AA seq 144 aa
MATGSGAATANVGDVEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELS
EVFMKTLNYTARFSRFKNRETITAVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSL
EGRFEDEELQQILDDIQTKRSFQY
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcgactggaagcggcgcggctacggctaatgtcggagatgttgaagaagatgcttca
cagctgctgtttcctaaagagtttgagaacgccgagaccctgctgaactctgaggtgcac
atgctgctggagcatcgcaagcagcagaacgagagcgccgaggacgagcaggagctgtct
gaagtcttcatgaagacgctcaactacacggctcgcttcagtcgcttcaagaaccgcgag
accatcaccgccgtacgcagtcttctcctgcagaagaagctccataagtttgagttggcc
agtttagcaaatctgtgtcctgaagctgcagaagaggccaaagccctgatccccagtctg
gaggggaggtttgaagacgaggagctgcagcagatcctggacgacatccagaccaagaga
agtttccagtactga

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