Perca flavescens (yellow perch): 114553568
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Entry
114553568 CDS
T07494
Symbol
hcfc1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03083
Polycomb repressive complex
pflv04980
Cobalamin transport and metabolism
pflv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114553568 (hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
114553568 (hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114553568 (hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pflv01009
]
114553568 (hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflv03036
]
114553568 (hcfc1)
03029 Mitochondrial biogenesis [BR:
pflv03029
]
114553568 (hcfc1)
Protein phosphatases and associated proteins [BR:
pflv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114553568 (hcfc1)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
114553568 (hcfc1)
HMT complexes
COMPASS/SET1 complex
114553568 (hcfc1)
MLL-HCF complex
114553568 (hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
114553568 (hcfc1)
Mitochondrial biogenesis [BR:
pflv03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
114553568 (hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
114553568
NCBI-ProteinID:
XP_028430593
LinkDB
All DBs
Position
4:complement(34735999..34752738)
Genome browser
AA seq
1831 aa
AA seq
DB search
MSAPVSAVSGTMASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPASPAMSATPVQPV
NSPKSPSPAVAALSAQSLPQTAVLKVAAQQSATGTSVVTVRPSQPGKSPVTVTSLPPGVR
MVVPAQSTQGSPIGSSPQMSGMAALAAAAAATQKIPPSAGTVLNVPAGATILKTVAVSPG
TTTMKMASPVMVSNPATRMLKTAAAQVGTATASSPTNTRPIITVHKSGAVTVAQQAQVVT
TVVGGVTKTITLVKSPLTMGSSGTLISNLGKMMSVVQTKPVQTSAITGQASTNPLTQIIQ
TKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPSTTKQGTTIIKTI
PMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLGAAAGQQGLTQVV
LKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVS
SSLAGGTVDSSNASLVTPITTLGTIATLSSQVISPSAITVSTAQTSLTSASTLPSSTMTV
QNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGSAGEGSGTVTLVCSNPP
CETHETGTTNTATTSSAAIGAGQVCSNPPCETHETGTTNTATTSSAAIGVGQVCSNPPCE
THETGTTNTATTASSNMSAPRMCSNPPCETHETGTTNTATTASANMGSDQASTATNQVKT
VCSNPPYETHKTGATNTATQSSSNMNASQTSTVQKVCSNPPCETHETGTTNTQSTASSSM
GSEQTSTASGQVQTVCSNPPCETHETGTTNTQSTSSSSMGSEQTSTASGQVQTVCSNPPC
ETHETGTTNTQSTSSSSMGSEQTSTASGQVQTVCSNPPCETHETGTTNTQSTATSSMGAD
QTSTATGQVQTVCSNPPCETHETGTTNTATTATCSMETGEGTAAQQTEEGAEGTSSTEVA
STAATGTVTTPQGRAITTVTQSTPAPGPSVPSISSITEGVSPSSTEEPMQTDETASAEAA
PAVEGATAMQTQVEGEAATSTALNLPSELMSEGQGATLMVTGLSDEELAVTAAAEAAAQA
AATEEAQALAIQAVLQAAQQAVMHEGNSTGESQQPTNIPIMLTQQELAALVQQQQQLQEA
QAAAQQAAMDTSLPTEGLAPADSLNDPSVESNGHNEMAAAVTSAVASLLPRTTAETLAPS
STFAPSVSVASPAKLQAAAALAEVANGIEGEKQAPQPTPVKPVVKKENQWFDVGIVKVTN
MVVTHFYMPGDDSHGDDDSGIMPDYGQMKKMELQPGTAYKFRVAGINACGRGSFSEISAF
KTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTAEAKASTPA
QLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESG
KDAASAKPAPKRPGTSPDTKATGPKKARTDQ
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctgtttccgcggtgtctgggaccatggcgtcggttctgcagccgcggtgg
aaacgggtcctgggatggtccggtcccgttccccggcccaggcatggacaccgagctgta
gctataaaggagcttatggttgtctttggcggtggaaacgaagggattgtggacgaatta
catgtatacaacactgcaacaaaccagtggtttatcccagcggtccgtggtgatattccc
cctggttgtgctgcatatggttttgtctgtgatggcacaagattgctggtttttggtggc
atggtggagtatggaaagtacagcaacgatctctatgaactacaggccagcagatgggaa
tggaaaaagttgaaagcaaaaaacccgaagaatggcccccctccttgtcctcgtcttggc
cacagtttttccctggttggcaacaaatgctatctgtttggtggactagccaatgacagc
gaggacccaaaaaacaacattcccagatacctaaatgatctgtacacacttgagcttcgt
gcgggttccagtgtggttggatgggatattccaatcacatatggagttctgcctcctccc
cgtgagagtcacactgctgtggtgtatacagaaaagacgagcaggaaatctcgcctcata
atctatggagggatgagtggttgccgccttggagatctgtggacacttgatattgatacc
ctgacatggaacaaaccatcagtaagcgggacagcaccgctccccagaagtctgcactca
gccactaccatcacaaacaagatgtatgtttttggaggatgggttccattggtaatggat
gatgtcaaagtggccacacacgagaaggagtggaagtgcacaaacactcttgcctgccta
aatctagactccatgtgttgggagacagtattgatggatactcttgaagacaacatccct
agggcccgtgctggccactgtgctgtagccatcaattccagactctatgtttggagtggc
cgtgacggttatcgtaaagcttggaacaaccaagtctgttgtaaagacctctggtacctc
gaaacagagcgtccacacgcccctgcaagggtgcagttagtccgtgccaacacaaactct
cttgaggtgagctggggcgctgtctcaactgctgacacctacttactacagctgcagaaa
tatgacatccctgcaactcctgcctcaccagccatgagtgccaccccagtgcagcctgtg
aactctccaaagagcccctcaccggctgttgcagcactctctgctcagagcctaccccag
acagcggtcttgaaggttgcagctcaacagtctgcaacaggcacatctgttgtcacagtc
cgccccagccagcctgggaaatcccctgtcactgtgacatcccttcctccaggtgtccga
atggtagtccctgcccagtccacccaaggatcgccaattgggagcagccctcagatgagt
ggcatggcagctttagctgcagcagctgcagcaacacagaagatcccgccctctgcaggc
actgtcctcaatgttcctgcaggtgccaccattctcaaaacagtagccgtttcgcctggc
acaaccacaatgaaaatggcttctccagtcatggtcagtaacccggccacccggatgctg
aaaaccgctgcagcccaggtgggcacagcaactgcatcctcccccaccaacaccagaccc
atcatcactgtgcacaagtctggtgcagtcacagtggcccagcaggcccaagtggtaacc
actgtggtaggaggagtcaccaagaccattaccctggtcaagagtcctctcaccatgggc
agcagtggcactctgatctccaaccttggcaagatgatgtctgtggtacaaaccaagcca
gtgcagacatcagctatcacaggccaggcttccactaaccctctcacacagatcatacag
acaaagggtcccctcccagccggcaccatcctgaaactagtgacctccgcagatggcaag
cccacaaccatcatcaccacttcccaggcaggaggcacaggaaacaagcccactatactg
aacatcagcggtgtctctccctccaccactaagcagggcaccaccataattaagaccatc
cccatgtcggccatcatgacccagcctggagccacaggtgtgacaagcagtgcaggcatg
aaaacgcctatcacaatccttaccacaaaggtgatgaccactggaactcctggtaaaatc
atcactgcagtgcccaaacttggcgctgcagctggccaacagggactgacacaggtggtt
ttgaagggtgctcctgggcaacctggcactattttgcgcactgtgcctatgagcacagtt
ggcggtgttcgacttgtgacaccagtgacagtgtctgctgttaagcccacggttaccact
ctggttgtcaaggggactactggtgttaccactcttgggaccgtcactggtacagtctcc
tcaagcctggcaggaggcacggtggacagttccaacgcctctctggtcacccccatcacc
acactgggaaccatcgctaccctgtccagccaggtcattagcccatctgccataactgtg
tcaactgctcaaaccagcctgacttctgcctccacgttgccctcctctaccatgacagtg
cagaaccagcccacccaggttactctgatcacaactcccagtggtgtagaagctcaacca
gtgcaggatttgccagtgtccatcctggcttcaccaacctctgagcagcccagctccact
gaggctggatcagctggagagggctctgggaccgtcaccctggtctgttctaacccgccc
tgcgagacccacgagacaggaaccaccaacacagccaccacctcctctgctgccattgga
gcaggacaggtctgttctaacccgccctgcgagacccacgagacaggaaccaccaacacg
gccaccacctcctctgctgcaattggagtaggacaggtgtgctccaacccgccatgtgaa
acgcatgaaacggggacaaccaacacagccacaactgcttcatcaaacatgtctgcaccg
cgcatgtgctccaacccaccatgcgagacccatgaaactgggacaactaacacagctacc
acagcatcggctaacatgggaagcgaccaggccagcacagcaacaaaccaggtcaagaca
gtttgctccaacccaccgtatgagacccacaagacaggggccaccaacacagccacccaa
tcgtcatctaacatgaatgcaagccagacgagcaccgtgcagaaggtgtgctccaaccca
ccctgcgaaacacacgagaccgggaccaccaacacccagtccacagcctcctccagcatg
ggaagcgaacagaccagcacagcttcaggccaggtgcagactgtttgctccaacccaccc
tgcgaaacacacgagaccgggaccaccaacacccagtccacatcctcctccagcatggga
agcgaacagaccagcacagcttcaggccaggtgcagactgtttgctccaacccaccctgt
gaaacacacgagacggggactaccaacacccagtccacatcctcctccagcatgggaagc
gaacagaccagcacagcttcaggccaggtgcagacggtttgctccaacccaccctgtgaa
acacacgaaactgggaccaccaacacccagtccacagccacctccagcatgggagccgac
cagaccagcacagcaacaggccaggtgcagacggtttgctccaacccaccctgtgaaaca
cacgaaactgggaccaccaacacagccaccactgccacctgcagcatggagacaggcgaa
ggcacagcagcccagcagacagaagagggagcagaaggtaccagcagcacagaagtggcc
tctactgcagcaacgggcacagttaccaccccccaaggcagggccatcactacggtcact
cagtctacaccagcccctggaccatctgtaccttcgatctcatcaatcacagagggtgtg
agtcccagctccacagaggaacctatgcaaactgatgagacggcatcagcagaagctgca
cctgcagtggagggagccaccgctatgcagacacaagtggagggagaagcagccacatct
acagccttgaatcttccctcagagctgatgtctgagggtcagggcgccacactcatggtg
acagggctgtcggatgaggagctggctgtgactgcagcggcagaagccgctgctcaggca
gctgccacggaagaagcccaggcccttgctatccaggctgtcctccaggcagcccagcaa
gccgtaatgcatgagggcaattccactggagagagccagcaacccaccaacatccccatc
atgttgacccagcaggagcttgcagcactggtccaacagcagcagcagctgcaggaggct
caggctgctgcacagcaggctgccatggacacaagcttgcctactgaaggcctcgcccct
gctgacagcctcaacgacccctctgtcgagagcaacggacacaatgagatggctgccgct
gtcaccagtgctgtggcgtcactgctgccacgtactactgctgagacactcgctccatca
agcacatttgcaccctcggtttcggtggcaagtccagccaagctgcaagcagccgctgct
ctagcagaggtcgccaatgggatcgagggagagaagcaagcccctcagccaactccagtg
aagcctgttgtaaaaaaagagaatcagtggtttgatgttggaattgttaaagtgacaaat
atggttgtcacccacttctatatgccaggagatgattctcacggagatgatgactctggc
atcatgccagactacggccagatgaagaaaatggagctgcagcctggaacagcttacaag
ttccgtgttgctggaatcaacgcttgtggtcgtggatctttctccgagatatctgctttc
aagacttgcctgccaggcttcccaggggcaccttgcgccatcaaaatcagcaagagccca
gatggtgcccacctgacctgggagccaccctcggtgacgtcggggaagatcatagagtac
tctgtttacttggccatccagagcaaccagacagctgaagccaaggcctccaccccagca
cagctagccttcatgcgcgtgtactgtggacccaacccctcttgcctggtgcagtcgtcc
agcctctccaacgcccacatcgactacaccaccaagccagccatcatcttccgcatcgct
gcccgaaatgagaagggctacggtcccgccacccaagttcgatggctgcaagaatctggc
aaagatgccgcctctgcaaaaccagcccccaaaagaccaggcacctctcctgatactaag
gctactggtccaaagaaagcaagaacggaccagtga
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integrated database retrieval system
