Perca flavescens (yellow perch): 114553769
Help
Entry
114553769 CDS
T07494
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflv03036
]
114553769 (chd5)
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114553769 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Motif
Other DBs
NCBI-GeneID:
114553769
NCBI-ProteinID:
XP_028430908
LinkDB
All DBs
Position
4:13641780..13691800
Genome browser
AA seq
2026 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDDGERNAVPLTPLDSFFSDNDSLKQQKKKKPKKMK
EGKMPKVKKRKKEGEIQPRVDSDLEETSEVEEERERPEIGSESESSTYGPTKKKKKKPRE
KKEKKPRKKKRDEEDDDDDNDDGNLKEPKSSSQLMQEWGLEDVQYGFTEDDYKTITNYKA
FSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVA
QPTSVSSGHPSPQLGPIKKAKTKEGKGPGVRKRSKSVKEVKKKPKPKKTKSKSGQSGKKK
KASSSEEDFLEESDFDDISIHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETDHQDY
CEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDEEEEEE
PAGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLK
GKVQKILHWTWGEPPLPAELPAGPDGKPADPLTKPPLKGHPEREFFVKWAGLSYWHCSWV
SELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRKSKDPHYAGMDERFYRYG
IKPEWMVIHRIVNHSYDTDGDVHYLMKWRDLPYDQCTWEVDDFDIPEYDSHKASYWDHRE
QILGEDQRPLVVRKGKKLKEDHPKREIPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLE
GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWER
EFEMWAPDFYVLTYTGDKDSRAVIRENEFTFEDSAVKTGRKVFRMKKDTPIKFHVLLTSY
ELITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEEL
FHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTEL
IVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEA
PVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYK
YERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHN
DIQAFSRAHRIGQNRKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSK
QELDDILKFGTEELFKDEMEAARAMGDNKEGEEGNVIHYDDDAISKLLDRTQDATEDTEI
QNMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARN
LGKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQM
KNEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKS
EREFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV
NGKLSSPDLIPIGMELKKLTESLSSDPNTPVPASPVATQPGTPVPSEKNESLSGTAEDKE
TAEQDSKKLSEQESSSAEPASVPEKVADSEESKASSEEKTGDERDRTESPSAKTEPSANP
KESALKLSELSSSQTSPNLEPCKDTEKSSEKGDTDSPLAKTEDKENKPAIADDMKSEDAS
EGRLNGDKDTLDDMDESRKEDKNGYKVKFMFNIADGGFTELHTLWQTEERAALSSGKMHD
IWHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFK
LLEQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFTEVECLAESHQHLSKESLAGNKPAN
AVLHKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPPQQ
PFSQGGFGCSQMYSSSFGGGFRGPGGQPMVNYSQMPLGPYISETADKKKKTCIQTIMHVL
YEPPVSSNGPPPPTSHLDKKSLDSLRDVATPDLKSGKPSDVICIED
NT seq
6081 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaagacgacatggattttgaagacgat
atgccagatgaggatgacgatggggagcgcaacgccgttcccctcacacccctcgacagc
ttcttctctgacaacgactccctcaaacaacaaaagaagaagaagcccaaaaagatgaaa
gaggggaaaatgcccaaagttaagaagaggaaaaaggagggagaaatccagccacgagtt
gacagcgacctggaggagacctcagaggtggaggaggaacgggaacgtccagaaataggc
tctgagagtgagagtagcacgtacggcccaaccaaaaagaagaagaagaaaccgagggag
aagaaagagaagaagcccaggaagaaaaagagagatgaggaagatgacgacgatgacaat
gatgatgggaacctgaaagaacccaaatcatccagccagttgatgcaagagtggggtctg
gaagacgttcagtatggcttcactgaggacgactataaaaccatcactaactacaaggct
ttcagccagttcctcaggcctctcattgccaagaagaacccgaagattcccatgtcaaag
atgatgacagtgttaggggccaagtggcgagagttcagtgccaacaaccccttcaaaggc
gcatctgccaccgccgtggccgccgctgtggccgccgccgtggaaacggttaccgtggct
cagccaacgtctgtcagcagcggccatccgagccctcagctggggccaatcaaaaaagcc
aaaaccaaagagggaaagggaccaggagtcaggaagagaagcaagtctgtgaaggaggtc
aagaagaaacccaagccgaagaagaccaaatcaaagtcgggccaaagtgggaagaagaag
aaagcatcctcgagtgaggaggacttcctggaggagtcagactttgatgacatcagcatc
cacagtgcctctgtgctttctgatacctcaggggccgccaccaagaaaaaggctcgacgt
gggcggaaaaaaaggaaaaaggaagatggagatggttatgagacggaccaccaggactac
tgtgaggtttgccagcagggaggagagatcatcctgtgtgacacctgtcccagagcgtac
cacctggtctgtctggacccggagctggagaaggctcccgagggcaaatggagctgtcca
cactgtgagaaagagggtatccagtgggaggccaaagacgatgaggaggaggaggaggag
ccagcaggcgaggaagaggatgaccacatggagttttgcagagtgtgtaaagatggagga
gagctgctgtgttgtgacacctgcccatcgtcctaccacatccactgcctgaacccccct
ctccccgagatccccaacggggagtggttgtgtccccgctgcatgtgccctcccctcaaa
ggtaaggtccaaaagattctgcactggacatggggggaacccccattgccagctgaactg
cctgcaggccctgacggcaagccagctgatccgctgaccaagcctccactcaagggccac
ccagagagggagttctttgtgaagtgggccggcctttcgtactggcactgctcctgggtc
agcgagttgcagttggagctgtaccacacggtcatgtatcggaactaccagcgtaagaac
gacatggacgaacctccaccgtacgactacggctcgggagaggaggagctcaacagcgag
aagaggaagagcaaagacccccattatgctgggatggatgagcgcttctaccgctatggc
attaaaccggagtggatggtcatccaccggatagtgaaccacagttatgatacggatggg
gatgtgcattacctgatgaagtggagagacctgccctacgaccagtgcacctgggaagtg
gatgattttgacatcccagaatatgacagccataaagcttcttactgggaccacagggag
caaatactaggggaggaccaacgccccctggtggtgaggaaaggaaagaaactcaaagag
gaccatccaaagagagagatccctcctgatgctcccatcatagatccaaccatcaagttt
gaacaccagccgtggtacattaacgccactgggggaacactgcacccgtaccagctggaa
ggcctgaactggttgaggttctcctgggcacagggtacagacaccatcctggctgatgag
atgggcctgggaaagacggtgcagaccatagtgtttctctactcactctataaggagggt
cactctaaggggcccttcttggtgagtgcgcccctctccactatcatcaattgggagagg
gaatttgagatgtgggctccagatttctacgtgctgacttacactggagacaaagacagc
cgggcagtcatcagggagaacgagttcacctttgaagacagtgcagtgaaaacaggacgc
aaggtgtttcgcatgaagaaagacactcctatcaagttccacgtgctgctgacatcctat
gagctgatcaccatagatcaagccattctgggctccatcacatgggcctgcctggtggta
gacgaggcccacagactgaagaacaaccaatcaaagtttttcagaattctcaacgggtat
aagatctactacaagctgttgctcactgggactcctcttcagaacaacttggaagagctg
ttccatctgcttaacttcctcaccccagagcgcttcaataacctggaaggcttcctggaa
gaatttgctgatatttctaaagaggaccagatcaaaaagctccacgacctgctcggccct
catatgctcaggaggctgaaagctgacgtcttcaagaacatgcctgcaaagactgagctg
attgtcagagtggagctcagccccatgcagaagaaatattacaagtttattttgacgcgg
aattttgaggctttgaactccaaaggtggagggaaccaagtgtccctgctcaacattatg
atggacctgaagaagtgctgcaaccatccctacctgttcccagtggctgctgtggaagct
cctgtattacccaacggctcgtatgatggtaacctactggtgaaatcctcaggaaaactt
acgctgcttcagaaaatgctgaagaaactcaaagatgaaggacacagagttctcattttc
tctcagatgacaaagatgttggatctgcttgaagattttttggagttcgagggttataaa
tatgaacgtatcgatggaggtattactggaggcctaaggcaggaggccattgatcgcttc
aatgcgccgggcgctcagcagttttgcttcttgctttcaacacgagctggaggtcttggc
atcaaccttgcgagtgcagacactgtcatcatctacgattctgactggaatcctcacaat
gacatccaagcttttagcagagcccatcgtataggccaaaataggaaggtgatgatctat
cgttttgtgacgcggggctcagtggaggagcgaatcactcaggtggcaaaaaggaagatg
atgctgacccacctggtggtgcggcccgggctgggctccaaaactggctccatgtccaaa
caagaactggacgatatcctcaagtttggcactgaggagcttttcaaagatgaaatggaa
gcagcacgagccatgggtgacaacaaagagggcgaggagggcaatgtgattcactacgat
gacgacgctatctcgaagctgttggaccgcacccaggacgctactgaagacacagagatt
cagaacatgaacgagtacctgagctccttcaaggtggctcagtatgtggtgaaagaagag
gacggagaggaggaggtggagcgggagatcatcaagcaggaggagaatgtggatccagac
tactgggaaaagctccttcgccaccactacgagcagcagcaggaggatctggcccgcaac
ctcggcaaaggcaaacgcatccgaaagcaggtcaactacaacgatacgacccaggaggac
caagagtggcaggatgatctttcagacaatcagtcggagtactctgtggggtccgaggat
gaggacgaagatttcgaggagaggcctgaaggtggacgcagacagtctcgtcggcagatg
aagaatgagaaagacaaacctctgccacccttactggcacgagttgggggcagtattgag
gttctggggttcaacgctcgccagaggaaagccttcctcaatgccatcatgcgctggggc
atgcctcctcaggatgctttcaactcccattggctggttcgagacctgagagggaagagt
gagcgtgagttcagggcctatgtgtctctgttcatgagacatctctgtgagccaggggcc
gacggagcagagacctttgctgacggcgtcccacgtgagggactgtctcgtcagcatgtt
ctcaccaggatcggagtcatgtcccttgtcaggaaaaaggtgcaagagtttgagcatgta
aatggaaagctgagttctccggatctgattcccatcggcatggaactgaagaagctgact
gagagtttatcttctgatcccaacacccctgtgccagccagccctgttgctacacagcct
ggcactcccgtcccctcagagaagaatgagtctctctcgggtaccgctgaagacaaggag
accgcagagcaagatagcaagaaactgtcagagcaggaatcttccagtgcagagccagca
tctgtaccagagaaggtagctgacagcgaggagagcaaggccagctcagaggagaaaaca
ggagatgagagggacagaaccgagtcgccctctgcaaaaacagagccatctgccaaccca
aaagagtccgctttgaagctgtcagagctatcatccagtcaaacctcacctaacttggag
ccctgcaaagatacagagaagtcctcagaaaagggagatacggattctcctctggcaaaa
actgaagacaaggaaaataagccagccattgcagatgatatgaagagtgaggatgcatcg
gagggtcgattgaatggagacaaagacactttggatgacatggatgagagcaggaaagag
gacaaaaatggatacaaagtcaagttcatgtttaatatcgctgacggaggtttcacagag
ttgcacaccctctggcaaaccgaagagcgggcggcgctgtcttctggaaagatgcatgac
atctggcaccgtcgccatgactactggcttctagctggcattgttactcatggctatgct
cgctggcaggacattcagaatgacccacgttacgctattctgaacgagcccttcaagact
gagatgcataagggcaactacctagagatgaagaacaagttcctggctcgccgctttaag
ttgttggagcaggctctggtgattgaggagcagttgaggcgggcagcctacctgaatatg
acccaggatcccagtcacccggccatggctctcaacactcgcttcactgaggtggaatgt
ctggcagagtcccaccagcacctgtccaaagagtccctggccgggaacaagcctgccaat
gccgtgctgcacaaagtgctgaaccagctggaggaacttctgagtgacatgaaagctgat
gtgacgcggctgcccaacatgctgtccaggataccgccggtgtcggcccgtctgcagatg
tctgagaggagcatcctgagccgcctcaccagccgagggagcgagcctccaccacagcag
ccttttagccagggtgggtttggctgctcccagatgtacagcagcagctttggtggagga
ttcagaggaccgggtggacagcccatggtcaactacagtcagatgcctctgggaccctac
atcagcgagacggcagataaaaaaaaaaaaacatgcattcagacgatcatgcatgtttta
tacgaacccccggtgtcctcgaatggccctccaccccctacaagccatctggacaagaag
tcacttgactccttgagagacgtggctacgcctgacctcaagtcaggcaaacctagtgat
gtcatctgtattgaggactag
DBGET
integrated database retrieval system
